Os08g0276400

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Revision as of 12:54, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0276400| Description = Protein kinase-like domain containing protein| Version = NM_001067969.1 GI:115475675 GeneID:4345155| Length = 3026 b...")
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Gene Name

Os08g0276400

Description

Protein kinase-like domain containing protein

Version

NM_001067969.1 GI:115475675 GeneID:4345155

Length

3026 bp

Definition

Oryza sativa Japonica Group Os08g0276400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:10654523..10657548

Sequence Coding Region

10654781..10657264

Expression

GEO Profiles:Os08g0276400

Genome Context

<gbrowseImage1> name=NC_008401:10654523..10657548 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:10654523..10657548 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtgctcgggtggtgctgttcttggccgtggccgtggtggcggcggtggcgcaggagccgaacacggacgcctacttcgtgtcgaggttcttcgccaagatggggcgggcggcgccggcgtcgggcgcggcggtgtgcgggtggcccggggtggcgtgcgacggcgaggggcgggtggtggagttctcggccgccgggatggggctggagggcgccgtcccggaggacaccgtcgggaagctggcgcggctgcggtcgcttgacctcagcggcaaccgcctcgccgcgctccccaacgacctgtgggaggtgggcgcctcgctgctggagctcaacctctcccgcaacgccatccgcggggacctcccgaacaacatcgtcaacttcgccgccctccaggtgctcgacgtctcccacaacgccttctccggcgcgctgcccccggcgctcggctccatcgccgcgctccgggtgctcgacgccagccacaacctgttccagggccagctcctcggcaccgtcatctctggctggaccaacctctcctccatggatctctccggcaatgcgctggacggcgacttgccggacctctcgccgctactgtcactgtcctacctcaacctgtccgggaacaggctccggggctccgtcatcggagcgttccatgagcagatgaaggtgatagacctcagcaacaacagcttctcggggctaaactttagcagtggatatgcaggctcatctttggcatacctcgatttatcaggcaatgagcttaccggggaattcagtgttggcaacaggtttcagaacctgaagcatttgaatcttgcattcaaccagttgtccgtggcaaatttgctggtgtccatgggtgagatctctggattggagtttgtcaatttgtcgagcaccgggttgcatgggcaaattcctagggagttgtcttcccaattgtctagattgaaggtgctcgatttgtcgcggaacaatatcagtggagtagtgccagacttgagctcgattcgcctgcaggtgctggacttgtcggtgaacaacctcactggggagatccctgtggcattagtgaagaagttggtgtccatggagcggttcaacttctcatacaacaacctcaccgtttgcgcctccgagctctctcccgaggcgtttgccgctgcctttgctaggtccaggaatgattgtccgattgccgtgaatcctgaccgtatccagagaagtgggggcaaacgcaaggggatgaagttggcgttggccattgtgctttcgctcttcttctcggttcttggtctgctctgcgtggcagttgcatgtcggcggcggaggaagaggggtgatgtgctgcctgctgtcaagcaggtgtcattcaaggaggaaccagggatttcaggcccatttgcattccagaccgactcgacaacatgggttgccgatgtgaaggtcgcaacatctgtcccagttgtcatctttgagaagcccttgctgagtttcactttcgccgatctcttggcggcgacgtcaaattttgataggggaactctgctggcagaggggagatttgggccggtgtacaggggatttctccctggtggaattcaggttgctgtgaaggtgttggtccatggttcggcaatggctgaccaagatgctgcaagagagcttgagcggctgggacggatcaaacatcctaatttggttcctttgactggttactgcttagcaggggagcagagaatcgccatctacgagtacatggagaacggcaatctgcacaacctacttcatgacttgcctctaggagtccagaccactgaggattggagcactgacacatgggaagacaacaatggcggtgttgccaccgaaaacatcacaccagagggtaccgcgacatggatgttccggcacaagattgcattaggcgccgcgagggcactggcattcctgcaccatggctgcatccctcagatcgtccaccgtgacgtgaaggcgagcagcatctacttcgactgtgggatggagcctaggctgtctgacttcgggctgtcaatgatcgccgggaccagcacggacaacaacctgctgcaccattccccgggctacgccccaccggagttctccgactcggagaacgccatggcgacagcaaagtccgatgtctacagcttcggcgtcgtgctgttcgagctgatcactggcaagaagccactgggggacgactaccccggccagaaggaagccagcctggtgaactgggctagggcgatggtgaaggcaaacctcgggccgggcatcatcgacccaaagatccgcgacaccgggctggagaggcagatggaggaggccctgaggatcgcctacctctgcaccgccgagctcccctccaagaggccggccatgcagcagatcgttggcctgctcaaggacattgagcctaaggtagcagagcaggactga</cdnaseq>

Protein Sequence

<aaseq>MGARVVLFLAVAVVAAVAQEPNTDAYFVSRFFAKMGRAAPASGA AVCGWPGVACDGEGRVVEFSAAGMGLEGAVPEDTVGKLARLRSLDLSGNRLAALPNDL WEVGASLLELNLSRNAIRGDLPNNIVNFAALQVLDVSHNAFSGALPPALGSIAALRVL DASHNLFQGQLLGTVISGWTNLSSMDLSGNALDGDLPDLSPLLSLSYLNLSGNRLRGS VIGAFHEQMKVIDLSNNSFSGLNFSSGYAGSSLAYLDLSGNELTGEFSVGNRFQNLKH LNLAFNQLSVANLLVSMGEISGLEFVNLSSTGLHGQIPRELSSQLSRLKVLDLSRNNI SGVVPDLSSIRLQVLDLSVNNLTGEIPVALVKKLVSMERFNFSYNNLTVCASELSPEA FAAAFARSRNDCPIAVNPDRIQRSGGKRKGMKLALAIVLSLFFSVLGLLCVAVACRRR RKRGDVLPAVKQVSFKEEPGISGPFAFQTDSTTWVADVKVATSVPVVIFEKPLLSFTF ADLLAATSNFDRGTLLAEGRFGPVYRGFLPGGIQVAVKVLVHGSAMADQDAARELERL GRIKHPNLVPLTGYCLAGEQRIAIYEYMENGNLHNLLHDLPLGVQTTEDWSTDTWEDN NGGVATENITPEGTATWMFRHKIALGAARALAFLHHGCIPQIVHRDVKASSIYFDCGM EPRLSDFGLSMIAGTSTDNNLLHHSPGYAPPEFSDSENAMATAKSDVYSFGVVLFELI TGKKPLGDDYPGQKEASLVNWARAMVKANLGPGIIDPKIRDTGLERQMEEALRIAYLC TAELPSKRPAMQQIVGLLKDIEPKVAEQD</aaseq>

Gene Sequence

<dnaseqindica>285..2768#tctcttccctccacctcctcctcctcctctcttctcccctttcacactctagccatactctctccaccgcattagctcgccattgccaaccagaggagagagagaggtggtgggcagcggccacttgcctcttccgagctgtctcccatgacaccaccgccgccgccggtgtcgcttgctccgtgccaacaaccggtcgagcagctggtgggtggttcttgctagcacgcgcggcgcgagcgccaagatctcaccgtacgcgtgcagcgccgcggcgggcggccatgggtgctcgggtggtgctgttcttggccgtggccgtggtggcggcggtggcgcaggagccgaacacggacgcctacttcgtgtcgaggttcttcgccaagatggggcgggcggcgccggcgtcgggcgcggcggtgtgcgggtggcccggggtggcgtgcgacggcgaggggcgggtggtggagttctcggccgccgggatggggctggagggcgccgtcccggaggacaccgtcgggaagctggcgcggctgcggtcgcttgacctcagcggcaaccgcctcgccgcgctccccaacgacctgtgggaggtgggcgcctcgctgctggagctcaacctctcccgcaacgccatccgcggggacctcccgaacaacatcgtcaacttcgccgccctccaggtgctcgacgtctcccacaacgccttctccggcgcgctgcccccggcgctcggctccatcgccgcgctccgggtgctcgacgccagccacaacctgttccagggccagctcctcggcaccgtcatctctggctggaccaacctctcctccatggatctctccggcaatgcgctggacggcgacttgccggacctctcgccgctactgtcactgtcctacctcaacctgtccgggaacaggctccggggctccgtcatcggagcgttccatgagcagatgaaggtgatagacctcagcaacaacagcttctcggggctaaactttagcagtggatatgcaggctcatctttggcatacctcgatttatcaggcaatgagcttaccggggaattcagtgttggcaacaggtttcagaacctgaagcatttgaatcttgcattcaaccagttgtccgtggcaaatttgctggtgtccatgggtgagatctctggattggagtttgtcaatttgtcgagcaccgggttgcatgggcaaattcctagggagttgtcttcccaattgtctagattgaaggtgctcgatttgtcgcggaacaatatcagtggagtagtgccagacttgagctcgattcgcctgcaggtgctggacttgtcggtgaacaacctcactggggagatccctgtggcattagtgaagaagttggtgtccatggagcggttcaacttctcatacaacaacctcaccgtttgcgcctccgagctctctcccgaggcgtttgccgctgcctttgctaggtccaggaatgattgtccgattgccgtgaatcctgaccgtatccagagaagtgggggcaaacgcaaggggatgaagttggcgttggccattgtgctttcgctcttcttctcggttcttggtctgctctgcgtggcagttgcatgtcggcggcggaggaagaggggtgatgtgctgcctgctgtcaagcaggtgtcattcaaggaggaaccagggatttcaggcccatttgcattccagaccgactcgacaacatgggttgccgatgtgaaggtcgcaacatctgtcccagttgtcatctttgagaagcccttgctgagtttcactttcgccgatctcttggcggcgacgtcaaattttgataggggaactctgctggcagaggggagatttgggccggtgtacaggggatttctccctggtggaattcaggttgctgtgaaggtgttggtccatggttcggcaatggctgaccaagatgctgcaagagagcttgagcggctgggacggatcaaacatcctaatttggttcctttgactggttactgcttagcaggggagcagagaatcgccatctacgagtacatggagaacggcaatctgcacaacctacttcatgacttgcctctaggagtccagaccactgaggattggagcactgacacatgggaagacaacaatggcggtgttgccaccgaaaacatcacaccagagggtaccgcgacatggatgttccggcacaagattgcattaggcgccgcgagggcactggcattcctgcaccatggctgcatccctcagatcgtccaccgtgacgtgaaggcgagcagcatctacttcgactgtgggatggagcctaggctgtctgacttcgggctgtcaatgatcgccgggaccagcacggacaacaacctgctgcaccattccccgggctacgccccaccggagttctccgactcggagaacgccatggcgacagcaaagtccgatgtctacagcttcggcgtcgtgctgttcgagctgatcactggcaagaagccactgggggacgactaccccggccagaaggaagccagcctggtgaactgggctagggcgatggtgaaggcaaacctcgggccgggcatcatcgacccaaagatccgcgacaccgggctggagaggcagatggaggaggccctgaggatcgcctacctctgcaccgccgagctcccctccaagaggccggccatgcagcagatcgttggcctgctcaaggacattgagcctaaggtagcagagcaggactgaaataatattactagtgtttttggggtattgaaaagcaagtgtaggcagtgagctccttagttgttttggcatagtggagcttcactgcattgccatgccctgctctcctctgctgggatatatctttttcttcttttttgtttcttttttgttcttccacttgttgagatgttgcaatacagctttgctacacctgctccttactaacaatgttactactaccattgagtcatgacacatggaagatagctctctctc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0276400, RefSeq:Os08g0276400