Os08g0281600

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Revision as of 12:54, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0281600| Description = Cyclin-like F-box domain containing protein| Version = NM_001188566.1 GI:297726262 GeneID:9270913| Length = 4027 bp|...")
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Gene Name

Os08g0281600

Description

Cyclin-like F-box domain containing protein

Version

NM_001188566.1 GI:297726262 GeneID:9270913

Length

4027 bp

Definition

Oryza sativa Japonica Group Os08g0281600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:11033079..11037105

Sequence Coding Region

11033079..11033186,11033693..11033824,11035069..11035149,11035258..11035410,11035514..11036274
,11036756..11036960,11037043..11037105

Expression

GEO Profiles:Os08g0281600

Genome Context

<gbrowseImage1> name=NC_008401:11033079..11037105 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:11033079..11037105 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggagattccttggatgtcgtcagttttcataaacaagcactcgtctttcgtcaaagggtgagtgactatctgaggaggctttctctcagaatgctcaagttggagactgagcctattcaactagggcatcagcaggcagttgatcaatcttccgagtccaaagttggtcagtacccaacctcaatgcttcaacaacagaccagttgtgatcagcagagtctatgcattcaggtagataccaagctccaggagatgccaccgaacgaacacttgctcgaccaagttcctccacgaagccagaagaagctctgcatggatgacaggctaagtgaccttcctgatacaattctacaccatattatgtctctcttatcagcacaggaggttgcacgtacgtgtatcctgtccaagagatggaaggagctttcggcctcagcaccatgccttgatatctgtgtagataagtttggaatggacagggtgcggttcagtgagtttgtagcacatttgctgctatcccgggctcctaattcactgcatacatttcgtcttcactcttttgcaatcgaccatgccagctcttggatcaatcgtgcaattgagctcaaggcacaagtgcttgaattcaccgaatatataagatgggaatctttttacttggatccacagcttatggcttttgcatctcaatacctgaaatgtttgaagctcaccaatgttactctagactccaatgcgtttgaaccgctaaaccatgcatgcccagctttggaaaaccttcagttgtcacagtgcttccttgaggtgcctgagatttgttcagcttcattgaagaagttggatattatggagtgttctcttttgatgaatcttcaaattcagacccctcgcttggtctctttacgcttcaggtgtcttcaatacaaatgttcttcatgcagtaggtatcctgtaattacagcagcagtgactctatgtgatcttccgaatgccgagaacatagacttgtcatgttctgggagacaggttacatttggcagagaaattcaaaagttcccgatgtatggcaaattaacaagcatctctcttggtgaatggtgtctttctgacaagttctctcgattattttgcctccttcgacactcacctgaacttaaggagcttactcttaagcttgaggtggaacgtcaagaccacaatggagaggatgagattcgcttgatggtgggaagatcattttcagccgaaaatcttaagaagatctgcatatctaccatgcaagagttgtccagaaagatcgctaggagacagagttggggaatgctctcacgcttcaacaagaaggataccgcagtctcgacgatcaccatgcctcaagaggtaaaaccagaggcaatggcgtatttggttgcctgcacgcccatccgatctaggtccagcttgtgcaaatcacacctcgaagccaggcttggaggaaacacggaaattggcttaggctag</cdnaseq>

Protein Sequence

<aaseq>MGDSLDVVSFHKQALVFRQRVSDYLRRLSLRMLKLETEPIQLGH QQAVDQSSESKVGQYPTSMLQQQTSCDQQSLCIQVDTKLQEMPPNEHLLDQVPPRSQK KLCMDDRLSDLPDTILHHIMSLLSAQEVARTCILSKRWKELSASAPCLDICVDKFGMD RVRFSEFVAHLLLSRAPNSLHTFRLHSFAIDHASSWINRAIELKAQVLEFTEYIRWES FYLDPQLMAFASQYLKCLKLTNVTLDSNAFEPLNHACPALENLQLSQCFLEVPEICSA SLKKLDIMECSLLMNLQIQTPRLVSLRFRCLQYKCSSCSRYPVITAAVTLCDLPNAEN IDLSCSGRQVTFGREIQKFPMYGKLTSISLGEWCLSDKFSRLFCLLRHSPELKELTLK LEVERQDHNGEDEIRLMVGRSFSAENLKKICISTMQELSRKIARRQSWGMLSRFNKKD TAVSTITMPQEVKPEAMAYLVACTPIRSRSSLCKSHLEARLGGNTEIGLG</aaseq>

Gene Sequence

<dnaseqindica>3920..4027#3282..3413#1957..2037#1696..1848#832..1592#146..350#1..63#atgggagattccttggatgtcgtcagttttcataaacaagcactcgtctttcgtcaaagggtggtagcgttaatgcctagtgttgatttcatatgtatcagcatgacatgctaaaatttgataaattttgttcctatatgttcagagtgactatctgaggaggctttctctcagaatgctcaagttggagactgagcctattcaactagggcatcagcaggcagttgatcaatcttccgagtccaaagttggtcagtacccaacctcaatgcttcaacaacagaccagttgtgatcagcagagtctatgcattcaggtagataccaagctccaggagatgccaccgaacggtaagttacatttgaatttctagtttatagggaccatttgatccataagaaatagaagtaatatctaacctaaagaaactaacgatcccaagataagcacattgatgtgttggaaggaaactcaccaaacatgaatagtacttgtggtagataataccgtgctgcgtgcacataacacaaggttgttgttctgtttatattgtctgattgcataaagaaacataaatctggctaaggttaataattgatcatttggagtcctttatatttattgttattgaagccacaaccatctaataactggctggtatggttgtagtattatcgctggaatgtatatttacatagggaatcacatatacccagataacaggttaagacctaatattggcataacatctaattgctttagtcttttatcctgaaaattgaacacttgttcttactgaaaacagaactttgatggatgtctttattgcagaacacttgctcgaccaagttcctccacgaagccagaagaagctctgcatggatgacaggctaagtgaccttcctgatacaattctacaccatattatgtctctcttatcagcacaggaggttgcacgtacgtgtatcctgtccaagagatggaaggagctttcggcctcagcaccatgccttgatatctgtgtagataagtttggaatggacagggtgcggttcagtgagtttgtagcacatttgctgctatcccgggctcctaattcactgcatacatttcgtcttcactcttttgcaatcgaccatgccagctcttggatcaatcgtgcaattgagctcaaggcacaagtgcttgaattcaccgaatatataagatgggaatctttttacttggatccacagcttatggcttttgcatctcaatacctgaaatgtttgaagctcaccaatgttactctagactccaatgcgtttgaaccgctaaaccatgcatgcccagctttggaaaaccttcagttgtcacagtgcttccttgaggtgcctgagatttgttcagcttcattgaagaagttggatattatggagtgttctcttttgatgaatcttcaaattcagacccctcgcttggtctctttacgcttcaggtgtcttcaatacaaatgttcttcatgcagtaggtatcctgtaattacagcagcagtgactctatgtgatcttccgaatgccgagaacatagacttgtcatgttctgggagacaggtatgattgtgatggtgttttcaccctctttacattcttttcgcctgaattatatccgtgaaaactgcatttatctgttgtatattttttgtatgtttgcaaggttacatttggcagagaaattcaaaagttcccgatgtatggcaaattaacaagcatctctcttggtgaatggtgtctttctgacaagttctctcgattattttgcctccttcgacactcacctgaacttaaggagcttactcttaagcttgaggtgaacaatatcatagatgtatagttctggctataagatacttttctcttagcacattacgcaaagtcttggtgaaatgtttttaagtagcacttttccgaacttcaggtggaacgtcaagaccacaatggagaggatgagattcgcttgatggtgggaagatcattttcagccgaaaatcttaagaaggtaacaatctgttgcgcggaaggtgatgcaagggccgccatgttgggaaatatgttccgtgcgaatgcaacatctctcaaggaaatgcatatcaaacactattagatgctgaacaacgcttgccttgtatctgttggatttgatttgccagtggagacctaaaaatttagggacaattactcatttgatcctgttttgaagtctaactaccaatgacactactttaggtttgctcatttgaatatcaaaattgaccttatattgtgaaaaccaaatgatagtgttaactaaggggcgaattgtccttttttttgccccacctcatttgatcatgttatatcaacgcttttttttattaagagcattttgaaatgtttgtaatgaatttggcatagctttgataattttgaataagtttaacggaattgtcttcaatttgacaagtttgattcaatttaacatattttttttttacaaaatttgaccacatattatccaacagcaaattcaagtctaaacggatgcccaacagcatgtgacaacaccgataaatccaacagaagagagctctgtccagcggtagtgatggtgcacacagagcagcaaccatcgccgcttctcctttctccatgtgccgcagccatcgccatcccacccttctcgctcgctggcgccgtcgatcctccgcgcgcagcaaccgccggtccgccgctgtcccctccgagcgtcgacgctcctctgtgcgctggccagccgcgttgccgcaggcccgcagccattgccgtccctcccttcgcgcgtcgatcggcgccgccgctcctccgtacgtagcagccgccgttatccccttcaagcgtcgctgctgccaccgctcctccacgcggagcagctgccaccgtcccttccaagcgccaccgctcctctctgcgccggccggccgcgtcgccgatttatatgtttggatagggttcgtataaccataggtattttggtcagttcacgctagcaatttggtcagacggcggtttcaattttgaaaaacgtggttaaatgagaaaacaaaaaaaaaaggtaaattaattattagatctcaaaacagagtcaaataagtaattgccaccaaaatttatcctcatacttatacagtatcgtgctgctttgctgctttgcatccacgcactttttgcgactaagctgaggaacaaaaaggattctctaccaatgatgaacaaaaatgtaacaagatctgcatatctaccatgcaagagttgtccagaaagatcgctaggagacagagttggggaatgctctcacgcttcaacaagaaggataccgcagtctcgacgatcaccatgcctcaagaggtaaaaccagaggtaagtggttttgtctcgatcttgaacgaaaaattgctcatacgatagatgcatccgtcaacgctggtgtagccaataaatttgatgcttttagcaagcattttgaacatatgatggagaggccacaaagtgagacaaaacctacattacatgatccctatgcatccatcacatctctatttcaaaaccttttttttaaaaaaaaatcaacgcgctaaaaaaatccaccctaaaaccctaaattgtatattcctatagaatttatttagaggagaaaattttcggattgaaatttataatcaattatatatatttgatggtaaaagaacaaatgattggagtatatatctaccactttaaaaacacagtcattctccttccatccttttatcaccatcaccaccgtgtgctaacaactgtaggatcctactttcttcttagtctacacaactaattcctagtaatatgggcttagcccgtgatctatggacacattgtgggtgcaggcaatggcgtatttggttgcctgcacgcccatccgatctaggtccagcttgtgcaaatcacacctcgaagccaggcttggaggaaacacggaaattggcttaggctag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0281600, RefSeq:Os08g0281600