Os08g0290400

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Revision as of 12:55, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0290400| Description = Conserved hypothetical protein| Version = NM_001067997.1 GI:115475731 GeneID:4345185| Length = 3746 bp| Definition ...")
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Gene Name

Os08g0290400

Description

Conserved hypothetical protein

Version

NM_001067997.1 GI:115475731 GeneID:4345185

Length

3746 bp

Definition

Oryza sativa Japonica Group Os08g0290400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:11671489..11675234

Sequence Coding Region

11671979..11672013,11672102..11672234,11672351..11672413,11672491..11672537,11672639..11672941
,11674842..11674950

Expression

GEO Profiles:Os08g0290400

Genome Context

<gbrowseImage1> name=NC_008401:11671489..11675234 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:11671489..11675234 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccgaggaggaagaagggcgtcgccgccaagcagaagccgccggagccacccgccgccgacgcgccgctgcgggaccggctgaggtggctcaacgaccaggaatatgaacatcggagtgctgccattaaagctattcaagcagctgagattgagagtatactttctcggttgcgtttggttgaatcctacatttccaaggagcaacaagagggatgtgccttgcaatattttcaggagaacttacccaacttatcagttgtccggaatgaggagcagaatgagcttgagttgaaacgggaagattgggacaaacgattaattggagaccactgtgatgacaagatttttcgggcttcagtctcttcgttaccaaatgttggttatgttcaattctcaggggattcagtgcggaaaagctttattgagagcatgccttttaattttaatgactttgcttggggtgagctacctgaggatcaactggcaggaattgcagatgctttacagacacccggggctgtgagtactcggctctcttttggtatgacaccaaaaactttaaggttgcccaaaaagggcgagatgctcttatctgtgcgtggctcacctcttggagtgtacaaagaagaaaatctggcagctgttcatgaatctacaaatggaagtgaagatgctgcctcatag</cdnaseq>

Protein Sequence

<aaseq>MPPRRKKGVAAKQKPPEPPAADAPLRDRLRWLNDQEYEHRSAAI KAIQAAEIESILSRLRLVESYISKEQQEGCALQYFQENLPNLSVVRNEEQNELELKRE DWDKRLIGDHCDDKIFRASVSSLPNVGYVQFSGDSVRKSFIESMPFNFNDFAWGELPE DQLAGIADALQTPGAVSTRLSFGMTPKTLRLPKKGEMLLSVRGSPLGVYKEENLAAVH ESTNGSEDAAS</aaseq>

Gene Sequence

<dnaseqindica>3222..3256#3001..3133#2822..2884#2698..2744#2294..2596#285..393#atttctttttttccttttcaatcttccgcctcttcgttcaaacttcaaaccaagctttggcctttggccccgggggctcggtggcctcggcgaaatccgccgaccttgcgcctctgtccgcctccgccgctgccctccgccacctcgggggaagggaaccgtcgggccgccgccggggttgtcggtgaggggggctcgctccagtcccccacaatcccaccgttccccctccgtcgtcgagatcttcccgactactacgagcggaggcccggcgcgcgcgcgcgatgccgccgaggaggaagaagggcgtcgccgccaagcagaagccgccggagccacccgccgccgacgcgccgctgcgggaccggctgaggtggctcaacgaccaggaatgtacggcgcctctaatccctattcttcatcccctttcacgaattttaggggttttttttttttggccttgtttatgtattctatagacccggccttgtaattactgtaagttgggggcaagattggttggttggttgtgcgttttggttggtcgattaataattgcttggctatgcttcgattaatagtgtagtgttatagtagatgaatcgcatggcttgtttctcattatttagttctgttgggaattaggttttagggattttcttaagtgtaatgtaactcattcccctccaaaattaggagccattttggagacctgacaacaacatagggatcattatgtaaactaaatatagctaatttgaggtgtgctattgacttgagaattatcagaacagaaaaaccaagaactaacaatcataagaactgcatggcaattgacaacatgtgaagcagaaaattactattttccatggctggtttggagatacttatctcttttgaaaagcatagcagattttatagctaagcacccaatctaggggaatgcgattttatagcacatccatggctgctgattttgatgtttcctttcattttgccgtagagtttggatgttctagaacatatttgagagtgaactatcaaattactttttttcccttttcttttgaaatggtataactttcattttcccttgtggaaacaaagactatcaaggtgtaggtaacataagcctgctaatccagagagcaatgaaacaaatagacataatttactagagagttaaacagaaaaagggactgccaaaactgaaaacaaacttgcatcgtctcaagtaggcaggcctcaaatctcaatccatcagatccactgctcctttttacctgccacctattcaatcctgaattgctgacttgcaagtcttaacccttgtattgagttggtgccttacctcattagttgcaaccaggtatttgcaaacctgctcggtacccagtgtgagaaacgagcaaactttgtactccaccagtcctggttctctgattgctttctgatgaaactaatcatttctggttctttgttgaggtagatgacatgtaattccttacttgtagtaatctaagtaatgtattcctgatctctatatctgaactatcaataatttgaataaaacttgcatagtttctctttaccaagctcatacaacttaagtgagcgatttaggtcaaatgcttaatcaacttcctctcatacaagaaattgttcatccggcatcctattgttgactgtggtttggttatttctttgtttctgtactctgtgatagcttttctaacgtgctttgaatttgaagagtaataaccccccaagaaattgattaaagatgctaaaataatcaatccctttagcagttagccctgttccagtcttattttcttaaaaacatatatcacattattactactctgtagaatgcaattgctcaaactaacaagaaactataattgtgtgttgaaatttgagtttggagtcgagacagctttcaaggatttaccatccagttatctgtaatttcttcaaaggcataaccagtgcattaccattatcttacaattaatgctgaagattgcaatcaaatgtgaatgaaaaggcttaaaacctggagcacacaataatgtagcattgactcgtaatctattggctttaggatgcattattcagcacaagatgccatcttttgagggagtactcccaattattgaagatcattacctgatcttcctgcttatccctagtatttgataaaccaacaataagtagtataggtttgttgtcaatttgcgtaatgtgattatcatgagtccactgctaatccagtgcccacaataaatagatgaacatcggagtgctgccattaaagctattcaagcagctgagattgagagtatactttctcggttgcgtttggttgaatcctacatttccaaggagcaacaagagggatgtgccttgcaatattttcaggagaacttacccaacttatcagttgtccggaatgaggagcagaatgagcttgagttgaaacgggaagattgggacaaacgattaattggagaccactgtgatgacaagatttttcgggcttcagtctcttcgttaccaaatgttggttatgttcaattctcaggggattcaggttcgagcatgctctctacctattgatggttatacctttattggcatcaaataataaatgactgttttaaatgtttttgttaccttgtgtgatgtatgcagtgcggaaaagctttattgagagcatgccttttaattttaatgactttgtaagtgctttttgaatattgatatcagctatttcttctctagtcattactaatctcacccctctgttgcttccaaggcttggggtgagctacctgaggatcaactggcaggaattgcagatgctttacagacacccggggtagcattttacgctgtccatatttattgaaatgatatatgagtagcaaatgaatgaatcgattctgtgtttccttttaagcttacctttacatgttttaatatgatcttgagcaggctgtgagtactcggctctcttttggtatgacaccaaaaactttaaggttgcccaaaaagggcgagatgctcttatctgtgcgtggctcacctcttggagtgtacaaagaagaaaatctggcagctgttcatggtatttatcaccttttttttcttggctcttcacaagcatcccttactatggtcctgttaacagttggctaaccccccaaaaattgcagaatctacaaatggaagtgaagatgctgcctcatagtaccagttgccacatatagcatactaaggatgctatgtgatctatccactcttttcgtttagtcgtgtgccccatggttgatatgttttgtctattgcagggacttatcaacccttgacttaacctttgggatattggtgtttttctttttcttacctaagctgggatactcacccagaatcaagatgcaatcactagttcaggtgagttgcagtatctatttgttatccttgtgtagttggcagtccgcacgtgtgttgttggatgctgatttcattcaggtgaaatcgtgtattaagtaatgtgtcaatgtgtcaccgttgttaactttgctgccaaggaagtgggcaaaagcagtctaaatgcgcgtgtccgtgcactcgtgattgtcaatgctgtattagctcattaccagagatgagacaatgtgagctgttgtaaaaccgaattgaaattgtgaatcatcagatttaatattcaaattgcttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0290400, RefSeq:Os08g0290400