Os08g0299900

From RiceWiki
Revision as of 12:55, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0299900| Description = Cyclin-like F-box domain containing protein| Version = NM_001068024.2 GI:297608364 GeneID:4345214| Length = 2331 bp|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0299900

Description

Cyclin-like F-box domain containing protein

Version

NM_001068024.2 GI:297608364 GeneID:4345214

Length

2331 bp

Definition

Oryza sativa Japonica Group Os08g0299900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:12392160..12394490

Sequence Coding Region

12392160..12392198,12392582..12392592,12393387..12394291,12394321..12394490

Expression

GEO Profiles:Os08g0299900

Genome Context

<gbrowseImage1> name=NC_008401:12392160..12394490 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:12392160..12394490 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgccgccggagctcatagacaacgtcaccgcctccctcccgccggatctcatctccgagattctcctccgcctcccgccggatgagcccgagcacctcttccgcgccgccctcgtctgcaagtcatggctccgcgccatctgcgagcacggcttcctccgccggctcaaagtcatgcagggagaccccgccgcccgcctcgcccgcaccacagcggtgcccctctcccccgatcccacctttcgccgggccctcgattgccgccatggccgcgccctcctccacgcttcggacgatgattggtatctcattgtctgggatcccgtcacgggcgaacggcaccgcgtgccagagcctggcatcccgtggctgatctactccgcagcagtgttctgtgccgcgagtggctgtgaccacctcgattgccacggcggtcccttcagagtggtttttatagccacggacgatgacgacgaactcgttaaggcgagcgtctactcgtcggagacgtgtgcgtggaacaagacagtgattcttgctgatggttatcaaacctggcaagagcgtttgcaagccatcactagaggtgaatcataccgtacaccttatgtccagcccaggcgaggtgcccttgttggagatgaaatctacttcacgcttcggaatgagaatgcaatcatcaagtacaactgggccgcgaactgcttatctaagattgacccgccgatacgagatgtgtatgacatttccctcatggagatggagaacggttcactgggttatgcctgcattcagggttccagcctttatgtgtggtcgaggaatgccagttcagaaggggctgcagaatgggtacagtgctgggtgattgagctggagcaaatggtacctgttgccaatcgcggtgatgaagcatttgttgttggctctgcagagggtgtgggtgtcatattcatgagcacaggtgttggattattcacgatcgagctcaagtcaaggcgggtgaagaaggttgaagagcctggggtctactctagcgtcttaccctacatgagcttctacactcctgttgagcctcaggaaaatgttttggacaaggacgggaaatatggattatag</cdnaseq>

Protein Sequence

<aaseq>MAPPPELIDNVTASLPPDLISEILLRLPPDEPEHLFRAALVCKS WLRAICEHGFLRRLKVMQGDPAARLARTTAVPLSPDPTFRRALDCRHGRALLHASDDD WYLIVWDPVTGERHRVPEPGIPWLIYSAAVFCAASGCDHLDCHGGPFRVVFIATDDDD ELVKASVYSSETCAWNKTVILADGYQTWQERLQAITRGESYRTPYVQPRRGALVGDEI YFTLRNENAIIKYNWAANCLSKIDPPIRDVYDISLMEMENGSLGYACIQGSSLYVWSR NASSEGAAEWVQCWVIELEQMVPVANRGDEAFVVGSAEGVGVIFMSTGVGLFTIELKS RRVKKVEEPGVYSSVLPYMSFYTPVEPQENVLDKDGKYGL</aaseq>

Gene Sequence

<dnaseqindica>2293..2331#1899..1909#200..1104#1..170#atggcgccgccgccggagctcatagacaacgtcaccgcctccctcccgccggatctcatctccgagattctcctccgcctcccgccggatgagcccgagcacctcttccgcgccgccctcgtctgcaagtcatggctccgcgccatctgcgagcacggcttcctccgccggtaccgcgccttctcggccttcttcacaggctcaaagtcatgcagggagaccccgccgcccgcctcgcccgcaccacagcggtgcccctctcccccgatcccacctttcgccgggccctcgattgccgccatggccgcgccctcctccacgcttcggacgatgattggtatctcattgtctgggatcccgtcacgggcgaacggcaccgcgtgccagagcctggcatcccgtggctgatctactccgcagcagtgttctgtgccgcgagtggctgtgaccacctcgattgccacggcggtcccttcagagtggtttttatagccacggacgatgacgacgaactcgttaaggcgagcgtctactcgtcggagacgtgtgcgtggaacaagacagtgattcttgctgatggttatcaaacctggcaagagcgtttgcaagccatcactagaggtgaatcataccgtacaccttatgtccagcccaggcgaggtgcccttgttggagatgaaatctacttcacgcttcggaatgagaatgcaatcatcaagtacaactgggccgcgaactgcttatctaagattgacccgccgatacgagatgtgtatgacatttccctcatggagatggagaacggttcactgggttatgcctgcattcagggttccagcctttatgtgtggtcgaggaatgccagttcagaaggggctgcagaatgggtacagtgctgggtgattgagctggagcaaatggtacctgttgccaatcgcggtgatgaagcatttgttgttggctctgcagagggtgtgggtgtcatattcatgagcacaggtgttggattattcacgatcgagctcaagtcaaggcgggtgaagaaggttgaagagcctggggtctactctagcgtcttaccctacatgagcttctacactcctggtattgtactaaaaattgcttatctcctgtccttcatttcctttacagcttctatatatttgctttgtcataatgtaactgcaatattgtaatttcaattgacaaaaacagttttgtgtatgctagagaatactgaatagaggcattgcaaatcagagccttaatttttgtgatgagagtttgcttgctaagaaccatgaccttgcattggtctaatatattcgggatacaaacttgttgatctggtatatttgttactctgttactttcaagcatatctgttactcaggcccagttgattcatggaatagttcatgcagcagtaagtagctaataggctaaactggctattgctaaagatttatagaagccttcttgttatgatatttatagaaacattagattttccttaaatggtattggtaccttctggcatagatgaagctcatatctcagacccaaccttgtaacctttggaactggttctctgtacatagttcgtcaaactgtaaagtttgagctggacagttggttatgagttgtgtgcttgactgtttggtgtgtttctttttttcagatcgtggcacattgttatcgctagcgaggactcactgatactcaaaacatgttgcaattgacttcttccagaactaccactatgaaatcatttattttctgttcggcagtataagtatgaacaatgcaagtaatcatgtttcgaatgtggttctagtgtcgaattcatcctaccaaccatgaactgtatttaatttatcatgtctggcatatttcagttgagcctcaggtacaggaaactaaaatctaaaattatgttgacttttgttgcttccattcagagatctgcaagtcatgcgaagctgaatagctggatcatgtttacttcgattacaaccttacagggccggggtagtgaggtgggtttgatcagtcttgcaattttttggtggtcagttcaacccgaatatgagtggaatattcttttttttaccaactaaacccacctaatcctcaaaccaaacagctgcaaaaaaaaaaaaaaaaaaaaaaaaaaaggatggccccgacccgacgttcaacttgcagctacatactggtattcaagtagtagctcctgccccatcttaactgccatcttagtgaaccttttgcatcatgtcttattggcaggaaaatgttttggacaaggacgggaaatatggattatag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0299900, RefSeq:Os08g0299900