Os08g0317300

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Revision as of 12:56, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0317300| Description = Retrotransposon gag protein family protein| Version = NM_001068054.1 GI:115475845 GeneID:4345247| Length = 1080 bp| ...")
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Gene Name

Os08g0317300

Description

Retrotransposon gag protein family protein

Version

NM_001068054.1 GI:115475845 GeneID:4345247

Length

1080 bp

Definition

Oryza sativa Japonica Group Os08g0317300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:13736141..13737220

Sequence Coding Region

13736141..13737220

Expression

GEO Profiles:Os08g0317300

Genome Context

<gbrowseImage1> name=NC_008401:13736141..13737220 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:13736141..13737220 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaagcaatgcaagcagagttgaggtcgctacggcagagtagggctgcacagggtaccactagtgctgcccagggtgccactggtgagggttcccatggtgcaggccaagatggtcagggtgcgaatgctcgtgttagtggtgtttctttgatccagtggattgggatgaagcttgatagttttgatggtagtggaactccagttgaggctgctgattggttgtcctatgtggaggacaagatggaagtttttgatgtattgactccggatcgctttcattatgggacacaacttttaaagggtgaggcacagatttggtggaaaggagtgcaatcagctcacacagctgcacatggccccttgtcttggcccgagtttgttaggcaatttgagaggagattctacccagctacgttcctcgaccggttgaaaattgatctgaacaactatacccaggaaaagaagtcggtggcagagtatgaggtgggcttcaaccagattgttcgctttgtccctcatgtggctcgtgatgaggttgagaaggccagacagttccggcagggcctcaagccttccatccgacatgtgttgggtgctttcccggtggtggattttcgcaccatggtggagcaggctttgggagttgagatgcaacaggtttataccttcgatatgcagaagtcttctggtggtgatcagactcggaaccatggtgataagaatagcaattctggtggcccagttcataagaagagcagttcccaacgccatcatccttaccatggtggtacaggtcagcctcgtgctcaaggagggagtaatactaaatatcgtgcttttcctaaacctgggatgggaatggtgtgcttccgatgtggcgatgcgcatcgccgtactgagtgccggtgggccggcaagtgctccatttgtagtcaggatcacaaggatgttgtttgtaggaagaatcccaatggtaagctgcgatgggaggcagtgacttcttcagccactacaggcacagtgcagatgatggctacaccctctacaccacacctacctgcgtcccatgtgcaatag</cdnaseq>

Protein Sequence

<aaseq>MKAMQAELRSLRQSRAAQGTTSAAQGATGEGSHGAGQDGQGANA RVSGVSLIQWIGMKLDSFDGSGTPVEAADWLSYVEDKMEVFDVLTPDRFHYGTQLLKG EAQIWWKGVQSAHTAAHGPLSWPEFVRQFERRFYPATFLDRLKIDLNNYTQEKKSVAE YEVGFNQIVRFVPHVARDEVEKARQFRQGLKPSIRHVLGAFPVVDFRTMVEQALGVEM QQVYTFDMQKSSGGDQTRNHGDKNSNSGGPVHKKSSSQRHHPYHGGTGQPRAQGGSNT KYRAFPKPGMGMVCFRCGDAHRRTECRWAGKCSICSQDHKDVVCRKNPNGKLRWEAVT SSATTGTVQMMATPSTPHLPASHVQ</aaseq>

Gene Sequence

<dnaseqindica>1..1080#atgaaagcaatgcaagcagagttgaggtcgctacggcagagtagggctgcacagggtaccactagtgctgcccagggtgccactggtgagggttcccatggtgcaggccaagatggtcagggtgcgaatgctcgtgttagtggtgtttctttgatccagtggattgggatgaagcttgatagttttgatggtagtggaactccagttgaggctgctgattggttgtcctatgtggaggacaagatggaagtttttgatgtattgactccggatcgctttcattatgggacacaacttttaaagggtgaggcacagatttggtggaaaggagtgcaatcagctcacacagctgcacatggccccttgtcttggcccgagtttgttaggcaatttgagaggagattctacccagctacgttcctcgaccggttgaaaattgatctgaacaactatacccaggaaaagaagtcggtggcagagtatgaggtgggcttcaaccagattgttcgctttgtccctcatgtggctcgtgatgaggttgagaaggccagacagttccggcagggcctcaagccttccatccgacatgtgttgggtgctttcccggtggtggattttcgcaccatggtggagcaggctttgggagttgagatgcaacaggtttataccttcgatatgcagaagtcttctggtggtgatcagactcggaaccatggtgataagaatagcaattctggtggcccagttcataagaagagcagttcccaacgccatcatccttaccatggtggtacaggtcagcctcgtgctcaaggagggagtaatactaaatatcgtgcttttcctaaacctgggatgggaatggtgtgcttccgatgtggcgatgcgcatcgccgtactgagtgccggtgggccggcaagtgctccatttgtagtcaggatcacaaggatgttgtttgtaggaagaatcccaatggtaagctgcgatgggaggcagtgacttcttcagccactacaggcacagtgcagatgatggctacaccctctacaccacacctacctgcgtcccatgtgcaatag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0317300, RefSeq:Os08g0317300