Os08g0327100

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Revision as of 12:56, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0327100| Description = Similar to Glycosyltransferase QUASIMODO1 (EC 2.4.1.-)| Version = NM_001068090.1 GI:115475917 GeneID:4345284| Length...")
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Gene Name

Os08g0327100

Description

Similar to Glycosyltransferase QUASIMODO1 (EC 2.4.1.-)

Version

NM_001068090.1 GI:115475917 GeneID:4345284

Length

5146 bp

Definition

Oryza sativa Japonica Group Os08g0327100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:14485932..14491077

Sequence Coding Region

14485986..14486094,14486230..14486264,14486359..14486400,14486500..14486593,14486723..14486919
,14488185..14488429,14488547..14488904,14488988..14489563,14490419..14490694

Expression

GEO Profiles:Os08g0327100

Genome Context

<gbrowseImage1> name=NC_008401:14485932..14491077 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:14485932..14491077 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgaggcggcggcggcggtccgtgctgctgctcctcctcgccctcacggtgctctcgccgctcgtgctctacacgcgccgtctctcggcggcgctgaaccccaaccagaggagggatttgcctggcgaaatcgtgaatcagggccgtggtgttaaggctagcaagctaaatgcacttcctctggaaactgtgggttctttgaaagaacccgttggcatcgtcttctcggaggagtcacgcgaatctgcaagcaaatcgaccgaacccgatagccaagaatttctattgaggaaggcaggggagcacaagaaccgggtgctctctgaggccacggctgctgatagtgccagatcggaagacgatgacttgatcgagcaagtgacaagcaaggatggagaagatgatggcttggcgacggtgtcagttgatcagcagcagataaccacggcatcccaacagcgatctgcttctgaggcaagttcattggagaatgtgcctgaacagacatccatggaaaactctctggaaggaaacaaagatggtgctttgcttgatactagaatccgcaatatcagggatctgttaatcaaggcaaaggtctaccttggtcttggagccattcgagcaaatccccagtacctcaaagacttgaggcagcggattcgggaagttcaaaaggttcttggtgatgcatccaaggactccgatctacccaagaatgccaatgagaaggtgaaaacacttgagcagacactgatcaagggaaaactgatgcaggatgattgttctgttgttgtcaaaaagcttcgagctatgcttcactcagctgaggagcaactgcatgcacacaagaagcaaactgttttcctaacacaacttgcagccaaaacccttcccaagggtcttcactgcctccccttgaggctagctaatgaatattttttattggatcctagccatcagcaattcccaaacaaggaaaaacttgatgaccccaaactatatcactatgcattgttctctgacaatatattggcagcagctgtagttgttaattcaacagtgttaaatgccaagcatccttctcatcatgtcttccacatagtaactgacagactaaactatgctccaatgagaatgtggttcctctctaaccctcctgggaaagcaacgattgaagtacggaatattgaagagttcacatggctaaatgccagctacagcccagtgctgaaacagctcgaatcacaatcaatgattgattactacttcaggacacatcgtgcaaactcagattcaaacttgaagtacagaaacccaaaatatctttctattctcaatcatttgcgattttatctacctgagatttacccaaatctccacaagattgtctttcttgatgatgatgtagtgataaagaaggacctaaccagcctctggtcaattgatatgaaggggaaagtaattggtgttgtagagacttgtggagagagcttccatcgttttgatcgttaccttaatttctcaaatcctgtcattgtgaagaattttgacccccatgcatgtggatgggcttttggaatgaatgtctttgatctggctgaatggaggcggcagaacataactgaaatctatcactcctggcaaaagcttaatcaggacagattactatggaaacttggcactctgcctccaggtttgattacattctggaataagacgcttcccctcaatcgttcatggcatgtccttggtcttggttacaacccgcatgtgagcagcagagatattgaacgtgccgcggtcatacattacaatggcaatatgaagccttggctggagattggtctgcccaaattccgaaactactggtcggcatacctcgattatgaccagcccttcctgcgggagtgtaacatcaatccttga</cdnaseq>

Protein Sequence

<aaseq>MVRRRRRSVLLLLLALTVLSPLVLYTRRLSAALNPNQRRDLPGE IVNQGRGVKASKLNALPLETVGSLKEPVGIVFSEESRESASKSTEPDSQEFLLRKAGE HKNRVLSEATAADSARSEDDDLIEQVTSKDGEDDGLATVSVDQQQITTASQQRSASEA SSLENVPEQTSMENSLEGNKDGALLDTRIRNIRDLLIKAKVYLGLGAIRANPQYLKDL RQRIREVQKVLGDASKDSDLPKNANEKVKTLEQTLIKGKLMQDDCSVVVKKLRAMLHS AEEQLHAHKKQTVFLTQLAAKTLPKGLHCLPLRLANEYFLLDPSHQQFPNKEKLDDPK LYHYALFSDNILAAAVVVNSTVLNAKHPSHHVFHIVTDRLNYAPMRMWFLSNPPGKAT IEVRNIEEFTWLNASYSPVLKQLESQSMIDYYFRTHRANSDSNLKYRNPKYLSILNHL RFYLPEIYPNLHKIVFLDDDVVIKKDLTSLWSIDMKGKVIGVVETCGESFHRFDRYLN FSNPVIVKNFDPHACGWAFGMNVFDLAEWRRQNITEIYHSWQKLNQDRLLWKLGTLPP GLITFWNKTLPLNRSWHVLGLGYNPHVSSRDIERAAVIHYNGNMKPWLEIGLPKFRNY WSAYLDYDQPFLRECNINP</aaseq>

Gene Sequence

<dnaseqindica>55..163#299..333#428..469#569..662#792..988#2254..2498#2616..2973#3057..3632#4488..4763#tttcatcagtggagaggaaggaagagaggaaaccccattgaggaggaggaggagatggtgaggcggcggcggcggtccgtgctgctgctcctcctcgccctcacggtgctctcgccgctcgtgctctacacgcgccgtctctcggcggcgctgaaccccaaccgtgagcgcatcttctttttctcttgttccttttcttttctttctttttcggtgtaattttggtgtagagattgccttctgtcgggcggtttcttgggcattggggtttatggtgttaccgtgtgatttcttgcagagaggagggatttgcctggcgaaatcgtgaatcaggtgcgtgtttctcggggttcttgcgagggattcgggagatttgtttggattttgatgagaacatttttttatggatttttttttgttttgctagggccgtggtgttaaggctagcaagctaaatgcacttcctctggtaaattttgttattgctcttcgtttcttcattttttgtttattttttcttggcgagggcgacgaataaaactggaggtttttttcttttggggttcaggaaactgtgggttctttgaaagaacccgttggcatcgtcttctcggaggagtcacgcgaatctgcaagcaaatcgaccgaacccgatagccaaggtctgggattttattttcttggtcctgtttgcatcttgtgttcctaggtccatggtatcgctctgtgaaattaaactatgatattttgagtttgtgctctgagttcgtttgcacgccaactgttcctagaatttctattgaggaaggcaggggagcacaagaaccgggtgctctctgaggccacggctgctgatagtgccagatcggaagacgatgacttgatcgagcaagtgacaagcaaggatggagaagatgatggcttggcgacggtgtcagttgatcagcagcagataaccacggcatcccaacagcgatctgcttctgaggttgatagtttattattgtcaagtttttatgtgcatcttaccaaatttagttatgttgtcacctgtggattagtcatctggacctttgggacctccgcatgtgctttagcttctatttgggattgcattattagtgttggggccaaactctgaatttgtggtaggtagggaaagtcttttttgtgcctattatacctaacttatcaatatctggtaatgttcctttcttgtgaaaagacagtggctactcatatcttgacgtatctttcttttcttgtcgtagtaggtcaaagtacctaagatgcaatgatgcattattttcaacattaaagaatgtgttggtaaattgttctgctcatgtcgttagaggaaaccatattttttagttgaacatgaattaatttatgcaatgtagctccgtacaaagtaactcagttgttttgttttcaaatgtgtgggtaaaatgctgtaagggtgtccttcagaaaagatgatgatcatagtttatctgacaatgttaatgcacagtttactgtaacaagatttatgctgttaaacaactagactaatgattaatcatggagtatgtcaagattcaaagcatttatgtttatcaattttgagaatgtgtgtatttggttcagttacggtcttctgcttcaggctaaagttaagtttctttgttatggaatgttctttgtgcacgcttttgttaatatgcttgcctctttcagccattccttaactttcctgtaagttaacttgactcccaatattcttgcctttcatgtttgtccacccaaaccgtttcttaagttgagattcttgtaccaactttgcaaggcatccctaaagtgtagaatcttggcacctgatgtgaagtccatttcacattatattccctcaacctttacaaatacaaggcacatagcaacctagacaaagtttcgttttgggaaatgaaactaccagacatttaaaaggctactcacatgagcacgtgcacacacattttcataattccttttgttgagttgactagaaatttctagatttggtagatctgttcacatgtttgtgcatccatatgctggggtcacctaaactgtagcactcatgcagaatttgtgccattttattatcaagtaatggtatcataattctgttcttgaatttcctttttaacaaaattcatttgccatatgttgagataatgatttcttgctaaatggtttcttttttattgcatggtcttctatttacaggcaagttcattggagaatgtgcctgaacagacatccatggaaaactctctggaaggaaacaaagatggtgctttgcttgatactagaatccgcaatatcagggatctgttaatcaaggcaaaggtctaccttggtcttggagccattcgagcaaatccccagtacctcaaagacttgaggcagcggattcgggaagttcaaaaggttcttggtgatgcatccaaggactccgatctacccaagaagtaagggtttcctatcctgtccgattgatgtatttaacattgtagctagttattatgttcaggatagcagcctcatcaattgttctgtaaccttttcatctgtcttgatttgatcagtgccaatgagaaggtgaaaacacttgagcagacactgatcaagggaaaactgatgcaggatgattgttctgttgttgtcaaaaagcttcgagctatgcttcactcagctgaggagcaactgcatgcacacaagaagcaaactgttttcctaacacaacttgcagccaaaacccttcccaagggtcttcactgcctccccttgaggctagctaatgaatattttttattggatcctagccatcagcaattcccaaacaaggaaaaacttgatgaccccaaactatatcactatgcattgttctctgacaatatattggcagcagctgtagttgttaattcaacagtgttaaatgccaaggtatgtaatattctgtcctagtttgaattacgctggaagatgatagcaagcatcatactgagtagattttattttatttgcagcatccttctcatcatgtcttccacatagtaactgacagactaaactatgctccaatgagaatgtggttcctctctaaccctcctgggaaagcaacgattgaagtacggaatattgaagagttcacatggctaaatgccagctacagcccagtgctgaaacagctcgaatcacaatcaatgattgattactacttcaggacacatcgtgcaaactcagattcaaacttgaagtacagaaacccaaaatatctttctattctcaatcatttgcgattttatctacctgagatttacccaaatctccacaagattgtctttcttgatgatgatgtagtgataaagaaggacctaaccagcctctggtcaattgatatgaaggggaaagtaattggtgttgtagagacttgtggagagagcttccatcgttttgatcgttaccttaatttctcaaatcctgtcattgtgaagaattttgacccccatgcatgtggatgggcttttggaatgaatgtctttgatctggctgaatggaggcggcagaacataactgaaatctatcactcctggcaaaagcttgtaagattcacatattctttacttccttgcataaataaaagtacttgctagaaatatttctatctattgaagccaagatacttcttaacattcaagaaatcgtgttgtttgtagtgagtagttagtattgaaccaatactagcttgagggctgtatgcctttatccctgtacgtaaagaatgtgacagcgtactaaattttttttgaactgctacatggctggtttttatgtacaatgaacatacctatttttccgcttaaaccatgtatcaaggcttaggcccactttgattcaaaggaaattcataggagttttagaggatttcgttcctataggaatctttcctatatagctctttgaatcaaaggaatgaatcctatggaatcctatgaaattcctatggaatacctaataccatgctagttttggaggaattctaacatgaggttttacctcatggaaactttcctttgagtctttatctctcctctaattcctgcgtttttcttgtgattcaatcaaatgaccattcctgtgttttgcaatcctcagttttacacttacattcgtatgaaaatcctgtgtttttcctattcctacattttctcaatcttgtgtttttcctattcctacgttttctcaatcctgtgtaatcacttgtaatctatgaaattacctttttagaaaggtttgtaattagtgtagaaattatttatggaaatgataactaaaatatagtgtgtatcataagtgtcaggtggctttgagtgcttttagtactaacgttgagttgtgtactttcatgttcattttggttcacatatgtactgaaatatatcaatctttgcttgcagaatcaggacagattactatggaaacttggcactctgcctccaggtttgattacattctggaataagacgcttcccctcaatcgttcatggcatgtccttggtcttggttacaacccgcatgtgagcagcagagatattgaacgtgccgcggtcatacattacaatggcaatatgaagccttggctggagattggtctgcccaaattccgaaactactggtcggcatacctcgattatgaccagcccttcctgcgggagtgtaacatcaatccttgaagaaagatggcaccttcaatgatccacactgacataaccaatagttttccccattcgtgggtcttgtgctctttagtttagtttttctagtatttgattgatttttttttaattgtagatgtcagttgttaactagatttccttgccacctgtcctttgtatccctacttctgcataactgcagatatggttgtagatgttttgatattacattctctcctggggcaggaaaatgttaaatagtgtgattctcctgtgtatggctttttaatccctacttctgcataactgcagataagttgtagatgttttgagactgcattctttcctggggcggaaaaatgttatatggtgtgattctcctgtgtatggcctttttatct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0327100, RefSeq:Os08g0327100