Os08g0332600

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Revision as of 12:56, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0332600| Description = Similar to NBS-LRR type resistance protein (Fragment)| Version = NM_001068103.2 GI:297608418 GeneID:4345297| Length ...")
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Gene Name

Os08g0332600

Description

Similar to NBS-LRR type resistance protein (Fragment)

Version

NM_001068103.2 GI:297608418 GeneID:4345297

Length

2309 bp

Definition

Oryza sativa Japonica Group Os08g0332600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:14803302..14805610

Sequence Coding Region

14803302..14803663,14803734..14804522,14804596..14805610

Expression

GEO Profiles:Os08g0332600

Genome Context

<gbrowseImage1> name=NC_008401:14803302..14805610 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:14803302..14805610 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggacaattttagtgtgtttgtcatccaaatgtttagaaaagctggttgggatactgcgggaggaatttgtgaagacattatttgtgagaagagatatcaggaggctccgtgaatctctgaagtactttgattctgttcgtgaagatgccgatgctttggccttggaaaatagagtgacaggaacatggtggagtgatgtgaaggatgttatgtatgatgttgacgacattgtagattttttgagagctcactcgtacaagcagcgatgttgtgatcgtgtcctgttctctaggctggcacaacttccacttgattacaggattgccagaagaatcaaatatgtaaatgaaaggcttgtgcaaatcacaatgaacagcaagatgtttgttccactggcaatgaggagtcctcaaactctccaaagaaacggtgttagtaggtatgtggctgctttggttgatgaacttgatgttgtcggaagagaaatcaaggaaactactgatgatatggttcaaatgatcattggatgtggccatcagagcaccatatcagtttacgggatcctagggatgggaggaattggcaagacaactttagctcagaagatatacaatgatcgaaggataagggagaggtttcaccatgtccttatatggctgtcaatttctgagagcatctcagagactgacttgctgaaggaggccattgaaaaggcaggaggacagtcttatcagggcaagagtaaggatcaacttctacaagctctactaaattgtatcactggacaaagtatcttccttgtgttggataatatgacaagttcacatatctggattgatcttcttcggtccccaatagagagatgtgcggatgcccatgtacttgttaccacaaggagccgtgatgttttgtcacagatgaacgcgatacatgttcacgaagtgcacaagctgaaggaacatgatggcctggaacttcttcagatcattccgaaccgaagacgaaataaatgtgtcctgtcctcgaaggcaacgaaggaagaatgggctagagtcctggagagcagatggtgttatgaaggacttccagaagaaatacaaggccccttgtatttaagttacaatgacttatccccacagcttaagagctgtttcctctggtgtgccttgatgcctcaaaatttccatattcaccgagatgtcacttacttctggattgctgaaggctttgtgaagaaagagggcagcagaccgatacaggaggtagctgaagattactaccacgagctaatcatgagaaatctactgcaggcaagaccagagtacatagacaagggaatttctaccatgcatgatctactaaggttgcttggccaatacttgacaagagacgtagccgtgttcatggatgaggacgaaacccctccaaatgttcggcgtttagcggttggcaacgccgttgaggaaatacctggtatacaagaccagaaaaacctacggtgcctcctagtgtatcaccacgacgcatgcagatcagtcaagagggacatttacaggaagctggagcatcttcgcatcttaattctagttggagcaggcctccagagcataccagagtcagttgggcacctggtgctgttgaggctgctggatgtcagctgtaatgaagaaatcaagcaacttccgggatccatcggaaaccttacctgccttgaacacctctcagtgtctggttgcgaaaaattggcatcgctgccggcgagtctgatgacgctgtccacgataagcttcctcaatatagttttccaagatggtactggcgggttccgattggatgaactagatagtctctccaagatacggcgcctcttgctgatcaagctggagaaagcctcaccgccagcttcacccgtgttgtgcaacaagcgtcacctcaaagagctcggccttacctgtacaatgggtgaagaagctgattgtcgaaccagctacgaggacagtgaagtgaagaacatcgaggagatctacaacaagctctgtccatcacgaaaattgcagtacatctttatagatgggttccctggtgacgcgtttccaaaatggttatcttcagagccgcaggacacactgccgaacctggctcatttgcacttcaaccactga</cdnaseq>

Protein Sequence

<aaseq>MGTILVCLSSKCLEKLVGILREEFVKTLFVRRDIRRLRESLKYF DSVREDADALALENRVTGTWWSDVKDVMYDVDDIVDFLRAHSYKQRCCDRVLFSRLAQ LPLDYRIARRIKYVNERLVQITMNSKMFVPLAMRSPQTLQRNGVSRYVAALVDELDVV GREIKETTDDMVQMIIGCGHQSTISVYGILGMGGIGKTTLAQKIYNDRRIRERFHHVL IWLSISESISETDLLKEAIEKAGGQSYQGKSKDQLLQALLNCITGQSIFLVLDNMTSS HIWIDLLRSPIERCADAHVLVTTRSRDVLSQMNAIHVHEVHKLKEHDGLELLQIIPNR RRNKCVLSSKATKEEWARVLESRWCYEGLPEEIQGPLYLSYNDLSPQLKSCFLWCALM PQNFHIHRDVTYFWIAEGFVKKEGSRPIQEVAEDYYHELIMRNLLQARPEYIDKGIST MHDLLRLLGQYLTRDVAVFMDEDETPPNVRRLAVGNAVEEIPGIQDQKNLRCLLVYHH DACRSVKRDIYRKLEHLRILILVGAGLQSIPESVGHLVLLRLLDVSCNEEIKQLPGSI GNLTCLEHLSVSGCEKLASLPASLMTLSTISFLNIVFQDGTGGFRLDELDSLSKIRRL LLIKLEKASPPASPVLCNKRHLKELGLTCTMGEEADCRTSYEDSEVKNIEEIYNKLCP SRKLQYIFIDGFPGDAFPKWLSSEPQDTLPNLAHLHFNH</aaseq>

Gene Sequence

<dnaseqindica>1948..2309#1089..1877#1..1015#atggggacaattttagtgtgtttgtcatccaaatgtttagaaaagctggttgggatactgcgggaggaatttgtgaagacattatttgtgagaagagatatcaggaggctccgtgaatctctgaagtactttgattctgttcgtgaagatgccgatgctttggccttggaaaatagagtgacaggaacatggtggagtgatgtgaaggatgttatgtatgatgttgacgacattgtagattttttgagagctcactcgtacaagcagcgatgttgtgatcgtgtcctgttctctaggctggcacaacttccacttgattacaggattgccagaagaatcaaatatgtaaatgaaaggcttgtgcaaatcacaatgaacagcaagatgtttgttccactggcaatgaggagtcctcaaactctccaaagaaacggtgttagtaggtatgtggctgctttggttgatgaacttgatgttgtcggaagagaaatcaaggaaactactgatgatatggttcaaatgatcattggatgtggccatcagagcaccatatcagtttacgggatcctagggatgggaggaattggcaagacaactttagctcagaagatatacaatgatcgaaggataagggagaggtttcaccatgtccttatatggctgtcaatttctgagagcatctcagagactgacttgctgaaggaggccattgaaaaggcaggaggacagtcttatcagggcaagagtaaggatcaacttctacaagctctactaaattgtatcactggacaaagtatcttccttgtgttggataatatgacaagttcacatatctggattgatcttcttcggtccccaatagagagatgtgcggatgcccatgtacttgttaccacaaggagccgtgatgttttgtcacagatgaacgcgatacatgttcacgaagtgcacaagctgaaggaacatgatggcctggaacttcttcagatcattccgaaccgaagacgaaataaatgtattcggtgatattggatcacagattgtcaagaaatgtgatgggcttcctcttgccatcaaggccgttgcaggtgtcctgtcctcgaaggcaacgaaggaagaatgggctagagtcctggagagcagatggtgttatgaaggacttccagaagaaatacaaggccccttgtatttaagttacaatgacttatccccacagcttaagagctgtttcctctggtgtgccttgatgcctcaaaatttccatattcaccgagatgtcacttacttctggattgctgaaggctttgtgaagaaagagggcagcagaccgatacaggaggtagctgaagattactaccacgagctaatcatgagaaatctactgcaggcaagaccagagtacatagacaagggaatttctaccatgcatgatctactaaggttgcttggccaatacttgacaagagacgtagccgtgttcatggatgaggacgaaacccctccaaatgttcggcgtttagcggttggcaacgccgttgaggaaatacctggtatacaagaccagaaaaacctacggtgcctcctagtgtatcaccacgacgcatgcagatcagtcaagagggacatttacaggaagctggagcatcttcgcatcttaattctagttggagcaggcctccagagcataccagagtcagttgggcacctggtgctgttgaggctgctggatgtcagctgtaatgaagaaatcaagcaacttccgggatccatcggaaaccttacctgccttgaacacctctcagtgtctggttgcgaaaaattggcatcgctgccggcgagtctgatgacgctgtccacgataagcttcctcaatataggtggcacagcactgaccccaagttcccaaagggatcggtaatttccgatgcatggataatcttcgatcagttttccaagatggtactggcgggttccgattggatgaactagatagtctctccaagatacggcgcctcttgctgatcaagctggagaaagcctcaccgccagcttcacccgtgttgtgcaacaagcgtcacctcaaagagctcggccttacctgtacaatgggtgaagaagctgattgtcgaaccagctacgaggacagtgaagtgaagaacatcgaggagatctacaacaagctctgtccatcacgaaaattgcagtacatctttatagatgggttccctggtgacgcgtttccaaaatggttatcttcagagccgcaggacacactgccgaacctggctcatttgcacttcaaccactga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0332600, RefSeq:Os08g0332600