Os08g0332800

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Revision as of 12:56, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0332800| Description = Similar to F7O18.23 protein (SWP1) (Struwwelpeter 1 protein)| Version = NM_001068105.1 GI:115475947 GeneID:4345299| ...")
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Gene Name

Os08g0332800

Description

Similar to F7O18.23 protein (SWP1) (Struwwelpeter 1 protein)

Version

NM_001068105.1 GI:115475947 GeneID:4345299

Length

3679 bp

Definition

Oryza sativa Japonica Group Os08g0332800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:14826600..14830278

Sequence Coding Region

14826965..14827198,14829003..14830094

Expression

GEO Profiles:Os08g0332800

Genome Context

<gbrowseImage1> name=NC_008401:14826600..14830278 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:14826600..14830278 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggggagctagggcagcagacggtggagctaggcgcggtggtgcggcgggcggcggaggattcgtacctggcgctgcgggagctcgtggagaagtcgcgggtggaggccgaggggaagaacgggcagcagaggtcggacaccgagaagaagatcgacctgctcaagttcatcgaccgcacccgccagcgcatgctccggctccatgtcctcgccaagtggtgccagcaggttcctttggttcattattgccagcaacttgcatcaaccctctctagccatgagacatgcttcacccaaacagccgattcgctgttctttatgcatgaagggttgcaacaggcccgcgctcccatttttgatgttccatctgctatagaagtcctacacacagggagttataggagagtgccaaaatgtgttgaggaaattggtactcagaacacactttttcaagatgaacaaaagcctactttgaagaaattaagcacccttgtacgggctaagttacttgaaatctcacttcctaaggaaatatctgaggtttcggtgactgatggaatagccaatgttcaggtagatggagaatttaaagttcttattacattaggttaccgtgggcatttctcactatggaggatattgcacatggagttacttgttggtgagaaggctgggccaattaagcttgaagagacaaggagatatgctcttggtgatgatattgaacggagaatggctgtggctgacaatcctttcatgattttgtatacaatactccatgaactatgtatttcacttgttatggatactgtaattagacagacaaatgttctacgacagggcaggtggaaagatgcgataaaatctgaacttatctcagatatcggcacaggacaaggtggaagtaatgctgtaatgcagcttggtcaagatggggagcttgattcaagtgggtctaggatacctggtctgaaaattaattactggctagaggaaaaaaacaatgcttcagctgaatcagattcatctccatatattaaaattgaggcagggcaagatatgcagataaagtgtcagcacagctctttcgtattggatccatttacagataaagaagctgatctttctattgatctgagttgcattgatgttgaagctctaattttgaaagcaattgcttgcaataggcacacacgtcttctggaaattcaaagggaattgatgaaaaatgttcagatgtcacaatcatccactgaggttatcctgaagcgagaagttcatggagagggctttcagaaggtaccttgtgggctgttctaa</cdnaseq>

Protein Sequence

<aaseq>MAGELGQQTVELGAVVRRAAEDSYLALRELVEKSRVEAEGKNGQ QRSDTEKKIDLLKFIDRTRQRMLRLHVLAKWCQQVPLVHYCQQLASTLSSHETCFTQT ADSLFFMHEGLQQARAPIFDVPSAIEVLHTGSYRRVPKCVEEIGTQNTLFQDEQKPTL KKLSTLVRAKLLEISLPKEISEVSVTDGIANVQVDGEFKVLITLGYRGHFSLWRILHM ELLVGEKAGPIKLEETRRYALGDDIERRMAVADNPFMILYTILHELCISLVMDTVIRQ TNVLRQGRWKDAIKSELISDIGTGQGGSNAVMQLGQDGELDSSGSRIPGLKINYWLEE KNNASAESDSSPYIKIEAGQDMQIKCQHSSFVLDPFTDKEADLSIDLSCIDVEALILK AIACNRHTRLLEIQRELMKNVQMSQSSTEVILKREVHGEGFQKVPCGLF</aaseq>

Gene Sequence

<dnaseqindica>366..599#2404..3495#atatctccttctcccgccgcctcgtgatcctcctcctccccctcctccaccttccagaaccttctcgaccctcccgcccccgaagaaccccaaggcggcgaccccacgtcgctctccccctccctctcccctctcaacctcctgcggtagcctcgccgccccgttccactggtgggctccgggaggaggagcagcgggaaccctagggggcggccgcccccagccgcccggctgctccgcatgtccccgggggtctagaattctcggggaaccctaattagagcgcgaccttggggggcgttggagagtgagagagagggggagataccttccgccaaaccctagggggacttgggtggggggcgatggcgggggagctagggcagcagacggtggagctaggcgcggtggtgcggcgggcggcggaggattcgtacctggcgctgcgggagctcgtggagaagtcgcgggtggaggccgaggggaagaacgggcagcagaggtcggacaccgagaagaagatcgacctgctcaagttcatcgaccgcacccgccagcgcatgctccggctccatgtcctcgccaagtggtgccagcaggtttgcaactgtccattgatccccttttatagcttcctttttctgtccgatttcgcgaaaaagctatcatttaattagagactgagaggtgtggctataggataggtccgccaaagtttagatttgcggcgtctaaaccggctgctaatttagttcaaaccaattgtatgtattaattgtaacggaccttatttgttcaataagaactttaatttaactgtagtactgtgtcctgaagcattgttttaaagatttagccctgattgttccagcatactgaggtgttgtctaccttatcggagctaaaagtgaaggcggcaccttttagagtgttgttgtatccgggaagaaaatcctactgtagtaggaaataattgtccataacttattccggactattaaaaatttaagaatccttgtgtgccttttattgtttaatagccttcttcgtgttcctagtctattccattaaaagttggctaggaagtatttaactctcaagagagtttagtaaccagcagaggcttttacaaattacagttttaccttttgagttgttatgttctgtgcattcaagtaactagttgtgtgtgcacactttgctgcaggtcctgattaatattaatttcccgtgttctgtgaaatgcttagaatcatgttgttttacagtgtgcgagctttaagcttaaactcaaaatcagaacaaactgacaaaaaaaagtattccggagattggacactgcagttaatctggtgcagtgattttactaactcttatgacacttgcacattgcacctgatatcctcaatcagtaggaaaaaaattgttcaccctagatgcttcagctcccacacataacagctgtctttgcaataggatagactggtgtgtgtgcgcgtgcgtccagagtgcattacaggggctcacgcaccaacgttcataggtattcagctacccatatattttgtgcgtcttttatgtagtgaagaaggtgatttttgctgtattggttaggccatgcatatgctttaatcattaggttgtgggttcgattcccaagctttatctttgtattctctctctctctctctttctcacctggtagggtttgagaaacttgtcatattttgtaagacttgcatcagtactttccaaaaaaggccattcttgaactaaagaaagagtaaattgcactttgtgccaggtaaaatgtactttatttcgcgttacaccagatttagcgtatattttctctttacaccagggtgtattgaaataaatttcacacactgggacacatcatcgaacccctagaaatttcataagatctgaatgaaactttgtgaagcatatgtcctaaactcaagaagccccgtaagttttcttcattcacattttacaggattttcctccgattataccatgcaacccagttcacgctgaaacttatttcaaaataccatagtagtgagatatactaaacctggtgcaaagtgaaacacggtacattctatacggtgcaaaatgcaatttactcttaaaaaacttgcatcttttgtactagcgacattaatttttttctttaaataccactatgtatgcatgtcttgaacatccatcgcaaaaatcctgcgtctgccacttctgcattacatagcgtgtaataatttcagccaagtatcataagaataggtattatctgttaaacaagtaatacaatagaaaactatagcttcatgcgcatgccatccgaatgtcatatttcctgaatttcatgattgcgatcattgctgtttcttgcaggttcctttggttcattattgccagcaacttgcatcaaccctctctagccatgagacatgcttcacccaaacagccgattcgctgttctttatgcatgaagggttgcaacaggcccgcgctcccatttttgatgttccatctgctatagaagtcctacacacagggagttataggagagtgccaaaatgtgttgaggaaattggtactcagaacacactttttcaagatgaacaaaagcctactttgaagaaattaagcacccttgtacgggctaagttacttgaaatctcacttcctaaggaaatatctgaggtttcggtgactgatggaatagccaatgttcaggtagatggagaatttaaagttcttattacattaggttaccgtgggcatttctcactatggaggatattgcacatggagttacttgttggtgagaaggctgggccaattaagcttgaagagacaaggagatatgctcttggtgatgatattgaacggagaatggctgtggctgacaatcctttcatgattttgtatacaatactccatgaactatgtatttcacttgttatggatactgtaattagacagacaaatgttctacgacagggcaggtggaaagatgcgataaaatctgaacttatctcagatatcggcacaggacaaggtggaagtaatgctgtaatgcagcttggtcaagatggggagcttgattcaagtgggtctaggatacctggtctgaaaattaattactggctagaggaaaaaaacaatgcttcagctgaatcagattcatctccatatattaaaattgaggcagggcaagatatgcagataaagtgtcagcacagctctttcgtattggatccatttacagataaagaagctgatctttctattgatctgagttgcattgatgttgaagctctaattttgaaagcaattgcttgcaataggcacacacgtcttctggaaattcaaagggaattgatgaaaaatgttcagatgtcacaatcatccactgaggttatcctgaagcgagaagttcatggagagggctttcagaaggtaccttgtgggctgttctaattaagggtattactgcagccaccttgtgtttttgatatttgatgcactgactatattcataaattgtgtagagagtacatagaagagactccaatgattgttgtacaaatgaaatgcttcaagttagggcatatggacaatcatatattgaccttggaataaatatcaggtttgttaattgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0332800, RefSeq:Os08g0332800