Os08g0337700

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Revision as of 12:57, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0337700| Description = RabGAP/TBC domain containing protein| Version = NM_001068116.1 GI:115475969 GeneID:4345310| Length = 3343 bp| Defin...")
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Gene Name

Os08g0337700

Description

RabGAP/TBC domain containing protein

Version

NM_001068116.1 GI:115475969 GeneID:4345310

Length

3343 bp

Definition

Oryza sativa Japonica Group Os08g0337700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:15251662..15255004

Sequence Coding Region

15251984..15252115,15252381..15252482,15252589..15252666,15252770..15252863,15252983..15253161
,15253236..15253352,15253717..15254274

Expression

GEO Profiles:Os08g0337700

Genome Context

<gbrowseImage1> name=NC_008401:15251662..15255004 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:15251662..15255004 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtttggtacccaagtgaggggtgtggtggaagatgatttcaaccctaggaggaggaggacattgtggaacacgccagctgcatccatgcccactaccacccacaccatcaggtacagcacacccaggaagggccatgccaatgctcaccagctgttggccaaattcgaggacctctacggattcatggtggagggcaatgtcgacgacgtcaatgtgctgaacgatgtgagggagaggatgagggagcaagggagggtgtggtgggcgctcgaggccagcaagggcgcaaactggtatctccaaccaaggatctcctccaatggtggcagtgagggggtaatcagcgtcacgtcgctcaagctgtcggtgctcaccaacacgattacactaaggaggctgatcaggaagggtgtgccaccagtgctgaggccgaaggtgtggctgtcagtgtcgggggctgccaagaagcggtcaacggtgcctgagacgtactatgatgagttgatccgggctactgaggggaagaccacgccagccacgctacaaatcgaccatgatctccctcgcacatttccatgtcattcttggctgaacagtgaggaaggtcaggcatctcttcggcgtgtgcttgttggttactcatttcgtgactcagaagttggatattgccagggtttaaattatgtagctgcattgttgttgcttgttatgaagacagaggaagatgcattctggatgcttgctgtactactggaaaatgtacttgtcaatgattgctatactgataatctttctggatgccatgtcgagcagagagttttcaaagacctcctagctaaaaagtgccccaggattgctgctcatcttgaagcaatggggtttgatgtttctcttgttgccacagaatggttcttgtgcctcttctccaagaccttgccttcagagacaaccctccgggtatgggatgttctattcaatgaaggagcaaaagtattgttccatgttgctctggcaattttcaagatgagagaagatgatctactacgtattcaacatattggtgatgtaattgatattttgcagacaactgctcatcatctatacgaccctgatgaactcctcacgttcgcttttgataagattggttcgatgacaacaaacacaatcacaaaggaaaggaaaaagcaagagacggttgtaatggctgagcttgaccaaagaatcagacggttaagttcactcaagatggatggataa</cdnaseq>

Protein Sequence

<aaseq>MFGTQVRGVVEDDFNPRRRRTLWNTPAASMPTTTHTIRYSTPRK GHANAHQLLAKFEDLYGFMVEGNVDDVNVLNDVRERMREQGRVWWALEASKGANWYLQ PRISSNGGSEGVISVTSLKLSVLTNTITLRRLIRKGVPPVLRPKVWLSVSGAAKKRST VPETYYDELIRATEGKTTPATLQIDHDLPRTFPCHSWLNSEEGQASLRRVLVGYSFRD SEVGYCQGLNYVAALLLLVMKTEEDAFWMLAVLLENVLVNDCYTDNLSGCHVEQRVFK DLLAKKCPRIAAHLEAMGFDVSLVATEWFLCLFSKTLPSETTLRVWDVLFNEGAKVLF HVALAIFKMREDDLLRIQHIGDVIDILQTTAHHLYDPDELLTFAFDKIGSMTTNTITK ERKKQETVVMAELDQRIRRLSSLKMDG</aaseq>

Gene Sequence

<dnaseqindica>2890..3021#2523..2624#2339..2416#2142..2235#1844..2022#1653..1769#731..1288#gaaagccgtaggagaagctgccattggcaagaagctcatcaagaagagagctaatcccgaaaaaaaatctgagagagaggcacaggcgctgagcatttcatcatcttggtgataggaacggaagagctgctcccaatcttggtttgattcgatcagagccattggacctcccaaaatagggtcaaaagaggagaggagagaggagcagaagacgtgcagggcctgccatttttagccgctgctcgtgctcccaatctgaggctgccggtgcttgctttgcttccgcctcctcctcgggttcttgcagcttccgggatcaatcttcccacagaggcggcagcaccggccaaatacggtcgtcttcttgattcttggtgcaacgaatcagctcacccgaggaaagatccgtgcgggttcttgcaatccaaggtgagttggtgtttttccctctccaatccaatgagttcttgcacctaatttgttccttgtttgatgccaagtgcaataaatttcttcttcttgaaatggtcccaggggtcaaggattagagagtaataaatcagtggttacaatatccttggaggagtaatccatcataagctcttttttttttccaagaaaggttaggaagatagaaggaagaaaaccttcgaagcagcagagatttggggatttttagatcgatttttgtgaatattatttgttggcaagtagatttgtggataagaacatgtttggtacccaagtgaggggtgtggtggaagatgatttcaaccctaggaggaggaggacattgtggaacacgccagctgcatccatgcccactaccacccacaccatcaggtacagcacacccaggaagggccatgccaatgctcaccagctgttggccaaattcgaggacctctacggattcatggtggagggcaatgtcgacgacgtcaatgtgctgaacgatgtgagggagaggatgagggagcaagggagggtgtggtgggcgctcgaggccagcaagggcgcaaactggtatctccaaccaaggatctcctccaatggtggcagtgagggggtaatcagcgtcacgtcgctcaagctgtcggtgctcaccaacacgattacactaaggaggctgatcaggaagggtgtgccaccagtgctgaggccgaaggtgtggctgtcagtgtcgggggctgccaagaagcggtcaacggtgcctgagacgtactatgatgagttgatccgggctactgaggggaagaccacgccagccacgctacaaatcgaccatgtgagtactgtgaagctattacggatttatcctgtacaagtcagtatattatctatatttatctaaagtgaaagattatatggtcatctcagaatttcaagtttaatttaatgaataagcctgttaaattttttttatttatagttgttaaaaaaactgtatgacataggcaacaaatagagtgtatagttgtcgcattctagctaagtgtataattagtaatgagcatcattttacattcttcagttaacttcatcagtataatttttattttagtgaaaacaaatgtgtgattctactataattatcattttactaggactatggaatttagagaataatattagttatgggaattttacaggatctccctcgcacatttccatgtcattcttggctgaacagtgaggaaggtcaggcatctcttcggcgtgtgcttgttggttactcatttcgtgactcagaagttggatattgccaggtaggcataaagcaatgcttttcaaatgtaactgttttatagagaagctccattactaacaccatgcaatgcagggtttaaattatgtagctgcattgttgttgcttgttatgaagacagaggaagatgcattctggatgcttgctgtactactggaaaatgtacttgtcaatgattgctatactgataatctttctggatgccatgtcgagcagagagttttcaaagacctcctagctaaaaagtgccccaggtatttcccccctgttatgtttatggcttttatgctatgatttttcatcagtcgctggcaataacaagcattaccattataagatgattgtgaatcattggattacccaaatgatgcaggattgctgctcatcttgaagcaatggggtttgatgtttctcttgttgccacagaatggttcttgtgcctcttctccaagaccttgccttcagaggttagaagaaataccagatagcataaatatttaagaggtcaatgtatggtttactcaaacttatcttaaataattttcattattattatcactgttgtggcagacaaccctccgggtatgggatgttctattcaatgaaggagcaaaagtattgttccatgttgctctggcaattttcaaggtgtgtatcatgaaatttatcgatgcatgcattctgagagttgcctctatgagcaagagggtgcctgctgtttctttcgcttactctgtttttggtatatttgcagatgagagaagatgatctactacgtattcaacatattggtgatgtaattgatattttgcagacaactgctcatcatctatacgaccctgatgaactcctcacggtaaatcttcttcctagttttgggtccatcatatcgtatattatttttgttcatgtactggtaactcagtgaggtagtcagtggctttatattacgtagtcgcaatagttttacagatgaaaatttgggtcaatgggatatttcagtacaatgagaataaaaaccgtaaaagatgtctgtatggtttacccagatgtgttgatgttttgaagcactctaccaaacattggttgctgatggatcttttttatccttgtttttctagttcgcttttgataagattggttcgatgacaacaaacacaatcacaaaggaaaggaaaaagcaagagacggttgtaatggctgagcttgaccaaagaatcagacggttaagttcactcaagatggatggataatgtataagaaagggaaaaatgctctgcagtgttgtagcctttgtaggtttggaaacagtgaaatgggtagtcatttggtacttggcaccagttcagactgcggttcgatgagtgaaatcgtggaagaaccaagaatatgggggagttgcgaaaactgcaatgtgggtttctcatgaacaagtcatattgtgtgtttttgtgtgtgcatcacatcttcatatttgaaagagaattccatgatgccatatgagcagattgtgctaatggtggaaacttgtacaggtttggtgtttgttgaaattcatttggcaacccagcaagg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0337700, RefSeq:Os08g0337700