Os08g0343000

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Revision as of 12:57, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0343000| Description = Protein kinase-like domain containing protein| Version = NM_001068128.1 GI:115475993 GeneID:4345329| Length = 6491 b...")
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Gene Name

Os08g0343000

Description

Protein kinase-like domain containing protein

Version

NM_001068128.1 GI:115475993 GeneID:4345329

Length

6491 bp

Definition

Oryza sativa Japonica Group Os08g0343000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:15564561..15571051

Sequence Coding Region

15564578..15565081,15565891..15565943,15566305..15566396,15566762..15566845,15567029..15567123
,15569376..15569592,15569712..15569946,15570049..15570202,15570447..15570788

Expression

GEO Profiles:Os08g0343000

Genome Context

<gbrowseImage1> name=NC_008401:15564561..15571051 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:15564561..15571051 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgctccgttcatgagggggcagttgccgcgagagagatggcggcggcggtgctgaacgccctcgcgccggcggccaccgtcgcgcagctcgccggcgcggacgcggcggggctggtgtcggcgatcctgcaggcggtgcgggcggcccggcggaaccggagggagtgccgcctcctggcgcggcgcgcgatgatggtgggcgacctgctgcggctgctgccgccggagtcggagacgatgcggcggccggaggtgaggcgggcgctggacgggctgggcggcgcgctccggcaggcgctggagctcgtggaatcgtgccaggagagcggcgccgtgcgcggcttgatgacggcggggaggcaggcggagcagttcagggaggtgcagggcgagatcaacgactacatgctactcttccccgtcgtcagccacatcgacatcacccgccgcctcgacctgatttacggcctgctgcttcctgcagactctcaaccccaccagatgccagaggatgcgccaggttcacctggcgaccattttgaagctgatgttaggaatgtggagatcactgcagctgaggtaattccgtttgaaagcaatcaaactataacagagccttttgagttcggtgaacaccatgtagcaggtcatcaggaaggtttggaagagctgctgtccaaagtgcagaggttgaaatggctttgctggtggtctcagcatgattctctagagcgtccatcaacttatgacttattaaaggctgctacaaataatttctcatctaaaagtaaaattgcaagtgggggttgggctactgtttacaaggctcaaatgcgtaatagtcttgagattgcaatcaaagtatatcctatgggcacgggagaaaaacgtgtattttcccagtacgaaagggagcttaatttacttacgaagcttcagcatacgaatataattaaacttcttggacactgcactggagaatgggagctgattttgatatatgaatatatgcccaatgggagcttggacaaatttatacatggcccaaatagagaagtatcgtttgactggttttcgtgcttcaaaataattcaagggatagcagagggtctgctctatctacacacgtatgaagctgagatatgcattgtgcatagggatttgaaaccgagcaacattctgcttgattcagatatgaatgctaagataggtgattttggtatagctaaaactataagcccggcacggcagcaagacacatatgtatcaggcacatttgggtatattgctcctgaatatcttcgtggaggtattttatcaacaaaggttgatgtatatgcctatggtgtcattcttctagagattattactggcaggaggtcctgtattccctgtctaaaagatgatgagtatgtgcatttaactgagtatgcctgggatctatggagaaccggaagatcagctgagcttctagatgcagcattgcgcaatgaggctcgaattgctgagataacaagctgcattcagatagcgttgttgtgtgttcagaaggatccggctgaccggccttccatgttggatgtgcttgcgatgctaagagatgagaagattgtagctgcccctaagaaaccaggtgatcttctccttggagacgaaacgagcgtagagtcaggtgatcttctccttggagaggaaacgagtggagagactgcacattggttcgcaagcagcggcgctacttgcagttctactgagttcacggtgccccggtga</cdnaseq>

Protein Sequence

<aaseq>MCSVHEGAVAAREMAAAVLNALAPAATVAQLAGADAAGLVSAIL QAVRAARRNRRECRLLARRAMMVGDLLRLLPPESETMRRPEVRRALDGLGGALRQALE LVESCQESGAVRGLMTAGRQAEQFREVQGEINDYMLLFPVVSHIDITRRLDLIYGLLL PADSQPHQMPEDAPGSPGDHFEADVRNVEITAAEVIPFESNQTITEPFEFGEHHVAGH QEGLEELLSKVQRLKWLCWWSQHDSLERPSTYDLLKAATNNFSSKSKIASGGWATVYK AQMRNSLEIAIKVYPMGTGEKRVFSQYERELNLLTKLQHTNIIKLLGHCTGEWELILI YEYMPNGSLDKFIHGPNREVSFDWFSCFKIIQGIAEGLLYLHTYEAEICIVHRDLKPS NILLDSDMNAKIGDFGIAKTISPARQQDTYVSGTFGYIAPEYLRGGILSTKVDVYAYG VILLEIITGRRSCIPCLKDDEYVHLTEYAWDLWRTGRSAELLDAALRNEARIAEITSC IQIALLCVQKDPADRPSMLDVLAMLRDEKIVAAPKKPGDLLLGDETSVESGDLLLGEE TSGETAHWFASSGATCSSTEFTVPR</aaseq>

Gene Sequence

<dnaseqindica>18..521#1331..1383#1745..1836#2202..2285#2469..2563#4816..5032#5152..5386#5489..5642#5887..6228#gataggttgatatttatatgtgctccgttcatgagggggcagttgccgcgagagagatggcggcggcggtgctgaacgccctcgcgccggcggccaccgtcgcgcagctcgccggcgcggacgcggcggggctggtgtcggcgatcctgcaggcggtgcgggcggcccggcggaaccggagggagtgccgcctcctggcgcggcgcgcgatgatggtgggcgacctgctgcggctgctgccgccggagtcggagacgatgcggcggccggaggtgaggcgggcgctggacgggctgggcggcgcgctccggcaggcgctggagctcgtggaatcgtgccaggagagcggcgccgtgcgcggcttgatgacggcggggaggcaggcggagcagttcagggaggtgcagggcgagatcaacgactacatgctactcttccccgtcgtcagccacatcgacatcacccgccgcctcgacctgatttacggcctgctgcttcctgcagactctcaaccccaccaggtgaggtgattgctcttcctaaatgacatttatcgaaaaaccggggttaaatttttagatatcgttgattcaattccacccctgattcctctatgatgtaaaattgttaatccctaggagttactgtaccattttacaatccttggtaatttctgaaatagaggaatgttagttgtgatgaaggaatcgtaggctcctagctttgccagcacaaccgtttgggggaattgactgacagagaaatgccaggggccttccgattaactccacaaggtggtggggcagtgggttaaatgtcctgggttcaaagcctcaccccttctaattatttgatattaggtcattccctattatttgcgtcttttttttttttggaattgactgaaaaggcatcagcgtgggatctgacagaaaagttcatatctagtggcttgcgaaatcctataggaggaagaggaggctactaagtcgagggccatcacaaagaagaccacattttggaggaggttaaccaaagagattgcctgtttgtctccaccacactgggagttcgccaaaattaagaaaacaattttgatgtccatggcatattagccaagcaacaatggcagcagtggtaccaaaaaaatatatttaagtgaactagtggcatgaaacagaatggcaaaattgcgttggcaaataaggaaaccacaaaccagttaatattcagaaccaaatcatgatttttttttctaaaattgtgcatgataaactattgtcctctgcttgattttcagtgattaacatcgtattgaactgtattccagatgccagaggatgcgccaggttcacctggcgaccattttgaagctgatgttaggttggtcagatgttaccaatgtattttgtaaatatgtgacacacgacagtgttcagatgcacatttgtgatatttttaaccatgcattgttgttcgaattgtattaatcatgcattatgtacagtacaatccattagaatcatgcttttccaaagtccacacagtaaaacaaacacattctcttgaactccaggataaacatcgttcatgtatttagctctgctagactacgaagtaacattcctttcttactctgattaagggtaaagagtttttttttctttctaaaatagtgaaaaggttttttcatactcatgtggccaaaaaaggaactctatcttttcatgtgtgtaactttcaggaatgtggagatcactgcagctgaggtaattccgtttgaaagcaatcaaactataacagagccttttgagttcggtgaacaccatgtagcaggtgtgtgctgacttctagtgcacatatttatttatttattttatttagatacatgaagtaatccaaacattaaacagtgtaaagtaaaaaaaattctaccagcagacttggtaggaattatgttggctaaaaaatgaagttctacaaaaaaaattcttatacatgaagtaatgcaaaaaaaaaaaaaaatggcaactgaattctgggggtccaaaaggagatttagtgtaggttttgacaatgtatcgaaccttttgttctgtttccattaatggaaattgggggatgccctcttgatccgtaaaggaaagtaatgcaaaaatttgtatgttcttataaataatgttttgggacattgtatctaggtcatcaggaaggtttggaagagctgctgtccaaagtgcagaggttgaaatggctttgctggtggtctcagcatgattctctaggttggtcacaaaagtcatctcagcatccaccatgatgcgcatccttgtgttgagtaccacatccgacatttaaaaaggattcaattattataactttatcctgttaaacataaataaactgttaaattctgctaaaagaaattttaatgcatgaaattaaccgaactccattccttttgacagagcgtccatcaacttatgacttattaaaggctgctacaaataatttctcatctaaaagtaaaattgcaagtgggggttgggctactgtttacaaggtagttcacaattttccatgcccttattatatgtgttatcgtataagcattttaggatgaagctgaaagcaatagtcatattttttctgattgtttaaaatatcttatcaatcatcagaacatttttttataataatcagaatatgaatattctttaattgtgttatatagttcttgtgtttattagtaaatgataatgagataaggaattgagtttatgctaaattatgactctttttaccttagtgccagatcatcgattgaatgactcgaacaaagccaatttgttggcatgcttatgtatataaagcactgcgatatattcaactagatgaaaccccgcgcgttggtgcgggagtttagtatgataatagtagaaataacgtgtaacatagctagacgttttaagcttatagaatttgtatttttttatcgatcattggaaaaaggctataaaccattaagttgatgtggtttatgataatttaaatggtatatagattgataatccaaaaaaaagtaaggtggtgtgacttcatgaaagaagaaaatgggggaaatgatttagacaatagattaatcatttaaaggctagaaacaataatatggtttaatgggagaatatagatactgtagaaattgatggggatatatatgttgaaatattatgtaaattatgtgggatgatgatttaacatgcttgaatttgaaagcttcaaaatataattaaatatagatgatataacatgtttgcatgaggtttaagatttaataattgctaatgaatgataatgtggtatctttgcatatcgagttttaggatgtaatgagttgtaactttatagatagtatagataagcttatagaaaacacataagatgccatggcccaaacctatgcatcttgtaaacagcattgaggtatacccttttaggtatataaagtgttggaaatgaatttgtccagcataatttaactgaaggtacaatatgcaaaacttttttttttttttgtatttgtagaacgggcaaggaatattgtagttatttaattattctaattttgtttgtacgttccctttatatgttgtaaccaactgcacacttatatgtctgttggtccttgatgtctctggtttgaaatatagccaagcaagatatatatgatatactaggagacaactcattttctatctggacaaataactctgtcatcaagaataagttttagaaaaccccaaatttcttgtcgaagtgcagaaaataccaagtattataactcgtcatatataacaccgggttttataaatgtttctgaaagccccattgcaaatccaattccaatcctacatattttactatcttggaaacaatagcccaaaacaacaaaagaattaaagacttcatcataattaagtaatgtacagttcaacacgcataaagattttgtgaaaatgtgataaaaatttaagtaaaaatatgtgatcaacatgtcacagggtgttatgagaccctaagacaagaaacctccggttatatatgtaccacaaccatcagacccagggttttctacaacttcaaccataaaaccttggttttctgcatttactcttatattcatgttaaaggagcatttgattttattagtttttttgtatgagtggttcaaggagaacaaaatttagggtctgttaggcacagcaccagctctagctccacctctcctggagctggagctcagccaaacagtttcagctccaccaaaaataggagcgaagctgggtggagctctctcacaaaatgaactagagaagtggggctgggtttaggcagcttcacaagtgcactccagacccaactcctggagctaaatttaggagttagagctttaccaaacaggcccttaatacctagctgtggtttcaaagggcacaatggtcacttcctttggctttcctttttgatgttgcaatatagagaaaactaacattttatacactaacaagattaaggtgtaaaagtgaaggtagcctagtcagtgatcaagacccctttgctccacatgcttggatttttttaacgttaagtttggatgttgacgagattgattttgcataaacttgggctaatatgtatatgcataatccctcatatggttaggatattcaaacacttacaatatgcaaaagctttgctgcacagattgataatcaatctcatttagagaaaatatcttttgacttcactttccaggctcaaatgcgtaatagtcttgagattgcaatcaaagtatatcctatgggcacgggagaaaaacgtgtattttcccagtacgaaagggagcttaatttacttacgaagcttcagcatacgaatataattaaacttcttggacactgcactggagaatgggagctgattttgatatatgaatatatgcccaatgggagcttggacaaatttatacatggtattctttctcggatcttgtatacattgtttattattgaaccaatttccacgtattgtattgatcttgtatacattgtttattattgaacaaatttataaataattgccatgttgcaggcccaaatagagaagtatcgtttgactggttttcgtgcttcaaaataattcaagggatagcagagggtctgctctatctacacacgtatgaagctgagatatgcattgtgcatagggatttgaaaccgagcaacattctgcttgattcagatatgaatgctaagataggtgattttggtatagctaaaactataagcccggcacggcagcaagacacatatgtatcaggcacattgtgagaaattatgaaacgcgtggatgattagattttataattttacatccattaaattcttctgactggtaatgtgtactgattctatctcttgaattgcagtgggtatattgctcctgaatatcttcgtggaggtattttatcaacaaaggttgatgtatatgcctatggtgtcattcttctagagattattactggcaggaggtcctgtattccctgtctaaaagatgatgagtatgtgcatttaactgagtatgtaagtaaattataatctaaacgctattcaatctctaaattttgggccaacatccaaacaaattaaagaaaactgcataatattttgtacaccctccatttcaaattacttcttgttgtagatttgtccaagtcaaacattttaatttttaaccctgaagtacctccacgtagaacgacaactaattagaacggagggagtacatatttataggacattttctgaaagacgattcttttcgcaggcctgggatctatggagaaccggaagatcagctgagcttctagatgcagcattgcgcaatgaggctcgaattgctgagataacaagctgcattcagatagcgttgttgtgtgttcagaaggatccggctgaccggccttccatgttggatgtgcttgcgatgctaagagatgagaagattgtagctgcccctaagaaaccaggtgatcttctccttggagacgaaacgagcgtagagtcaggtgatcttctccttggagaggaaacgagtggagagactgcacattggttcgcaagcagcggcgctacttgcagttctactgagttcacggtgccccggtgagaagagattttgtcatatttgaagctggtggctacttaaggtgcaagtacgttatgtataaagctattacctttgattattcacagcgttgcaagcaaaataagcatggtgaatgtgtatttcagattctgagtaattatggatttaccatatgtgatggaaataaattaaacatacagaaggtggaatgtatagtatatcataaatattttagacaaaattggctacaagcaatataattctgtggcatttgcttatgggcg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0343000, RefSeq:Os08g0343000