Os08g0359300

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Revision as of 12:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0359300| Description = Esterase/lipase/thioesterase domain containing protein| Version = NM_001068165.1 GI:115476067 GeneID:4345368| Length...")
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Gene Name

Os08g0359300

Description

Esterase/lipase/thioesterase domain containing protein

Version

NM_001068165.1 GI:115476067 GeneID:4345368

Length

5731 bp

Definition

Oryza sativa Japonica Group Os08g0359300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:16613457..16619187

Sequence Coding Region

16613917..16613973,16614088..16614188,16614277..16614447,16614745..16614919,16615034..16615134
,16615494..16615596,16615769..16616302,16618760..16618837,16618923..16619186

Expression

GEO Profiles:Os08g0359300

Genome Context

<gbrowseImage1> name=NC_008401:16613457..16619187 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:16613457..16619187 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttctccagcccatctccggcgccggcgccggcgctcgccggagctccgccgagggactctcccctcctcctaccgctcgcctccgccgccgcgtcctctgcgcgatccgcgccgacgcgccgcccccgatccacctctccgcggcggccccctcgcggccggcgaagccgcccgtctgcaccgccgacgagctccaccacgcgcccgtctccggcgccgggtggcgtctcgcgctctggcggtacaggccgccgcctcatgcgccggcgaggaaccacccgctgatgcttctgtcgggagtcgggacgaacgccatcgggttcgatctctcccccggggcctcattcgcccgtcacatgtctaaccagggatttgatacatggattgtcgaagtgagaggttctggtctgagcatacgtgatcatgataattctgcttcatctccatcaggcgctttcgatgatatatctaatggcacattggctcttgataaatcaagcacattggaggttgcttcagttcaaagttctggtttctctggtattgattatgatgaccttggaatagttgcgttggatgacccacctttactgatggagatgactagtttctttgatcgaatttcaaaacttctggaagaggctagtttaaataaaaattttcatgagatcacagataagatttcggttctatctgaaatggtagaaagctctgccgttattggtccaatgagagaagaaagtctgcgtcttctgaagaactttcaagagcagattgactcatgggaacactttgtggcaactcagatgaatctaaattctgaatataattgggacttcgaccattacttggaggaggatatacctactgcggtggaatatattagacaacatagtagagtaaaagatgggaagctgcttgccattggacactcaatgggaggaattttgttatatgcaatgctgtcaaaatatggtttcgaaggagttccatcaaacttagcggctattgttactttggcttcctctgttgactacacgacatccaattcatcactgaagatgttactgccacttgttcatcctgcgcaagcccttaatgtccctgctgttccattgggtacattattagcggcagcatatccctgggcatctggtccaccttatcttttttcctggcttaatcatcaaatatcagcacaggatatgatgcacccggagttgttgtccaagcttgtttttaacaacttctgtacagtgcctgcaaaggttgtccttcaacttacaacagcttttcgggaaggggggctatgcaatagaactgaaactttctcatacaaagatcatttgcgatattgtcagacccctgtcctagcactagctggagataaagatctcatctgtcctcctgaagccgtttatgaaactgtcaagctcatacctcagcacatggtgaaatatggggtttttggaaagccagaaggccctcattatgcacactatgacttagttggaggtcgactggcaacggatgaagtttacccatgcatcatagagttcctttctcaccatgatcagtag</cdnaseq>

Protein Sequence

<aaseq>MLLQPISGAGAGARRSSAEGLSPPPTARLRRRVLCAIRADAPPP IHLSAAAPSRPAKPPVCTADELHHAPVSGAGWRLALWRYRPPPHAPARNHPLMLLSGV GTNAIGFDLSPGASFARHMSNQGFDTWIVEVRGSGLSIRDHDNSASSPSGAFDDISNG TLALDKSSTLEVASVQSSGFSGIDYDDLGIVALDDPPLLMEMTSFFDRISKLLEEASL NKNFHEITDKISVLSEMVESSAVIGPMREESLRLLKNFQEQIDSWEHFVATQMNLNSE YNWDFDHYLEEDIPTAVEYIRQHSRVKDGKLLAIGHSMGGILLYAMLSKYGFEGVPSN LAAIVTLASSVDYTTSNSSLKMLLPLVHPAQALNVPAVPLGTLLAAAYPWASGPPYLF SWLNHQISAQDMMHPELLSKLVFNNFCTVPAKVVLQLTTAFREGGLCNRTETFSYKDH LRYCQTPVLALAGDKDLICPPEAVYETVKLIPQHMVKYGVFGKPEGPHYAHYDLVGGR LATDEVYPCIIEFLSHHDQ</aaseq>

Gene Sequence

<dnaseqindica>5215..5271#5000..5100#4741..4911#4269..4443#4054..4154#3592..3694#2886..3419#351..428#2..265#gatgcttctccagcccatctccggcgccggcgccggcgctcgccggagctccgccgagggactctcccctcctcctaccgctcgcctccgccgccgcgtcctctgcgcgatccgcgccgacgcgccgcccccgatccacctctccgcggcggccccctcgcggccggcgaagccgcccgtctgcaccgccgacgagctccaccacgcgcccgtctccggcgccgggtggcgtctcgcgctctggcggtacaggccgccgcctcatgtacgaccggtggtgcttcttcccgttgttttccaatttccagagccgtgcttgatttgatttgatctcgcccgtgttcgtgcaggcgccggcgaggaaccacccgctgatgcttctgtcgggagtcgggacgaacgccatcgggttcgatctctcccccggggtgagcagagatttctctcactgcaactctttttctgctgatgtagaatttcctcgcctgaaactaaacactgagatggtaggaagtggtggccagagtcttggaatcatgtaaatgcatggctcaagtttttggagtgatttgggatggggagagagcgatggtgtttgctgaaactactcttgtttggaattttcctgcaaattgtaagttgagggtcaatttggttgccatatgccaagttggatggatatggcattgacaggcatgatgtatactggggagtgggggcaatacatctaactctgttgaaaaatctggaacttattgtcttttcaaagtaaacattagttgcatatatccaactacaaagttatttttcttgaacacaattacaaaaagtgatgtgttacatacagagttacatactttcataggcctatcacattatcaacatacatccatgaggttctgttaaaaaaggcataagtatagtaggatcttgaccttcaatagtttttagatccttaaatttattgactatttgtcttgaagagaagaatgtttttgaagggtgctatcaagcaagatattagtggctttaggtcaacaccatgaaagccacatatttctatgttccaattcttctttttaagcatgatgagaagaatcagcataagcaaatactgcaaaattttccttgaacaaatacattttttttcctcgattatagtttaggaacgactagatacttagatggctagagcttggaggtgacaaactaagtgagaaagcacctgagtgggagatgcaagaggtgatggcaagctcaaaggtgaggatgatggtagctacagttatagtgtcgtgtgctgttgcaaaaatgggcatgatgacatgcgtgcacagttgccctggttatattgtttctagcttgaacatgcttcaggtgatgcctgccatgtccgaatggaaaattcatttttttttcataaatcacccggtgcacttggcacatattttgacgctgggtgcaacgccttttaggaagtgtatatgctacttggtcttggtgacggatgtaatatttcctatcttttctgccactgttgaatgacctactgaacttactatatcataattccatatatgtccaggttcaattttagtgcgtcatatcacatgtaaagttgcttctttgtaagcactgtaatcttttgcccactattttcttgtttgtttcacacatgcgaggaaacagtccctgactccctgttaacatgatctccaatgaataaggaagatagggttaactcatattataagattaacagcatcaagacaactaaaaaaatgcattccaaagaggaaaaaaccgaggatgctgaatattcagtttcttgagcttcatttgttttcttataagctgtaataaagttaatctatttttttatagaaaaataaatgaagttatgttgcatctaactcatattattgaaagtaaaatgcggttcaagttgcaaaagaactataggttacaagtcatggtagtcttgtatttggagtataggttatcaactaaactgttgggttgtcttcaatttttttagataatgtgggttgtcttcaattagacgggggaatccaattaacagcctcgactcgtatcctaacttgtctaagaactagcttcgcttcaaccaattctttcgtaccctcagctctactcatgttagctttggctatttcaagtgcctgttgagcttcttcctgatcaatgtcactacccagttccacatcattccctaaaatgatgatctcattattaactttctggcaaaactgctccacagaaccgccgttaaccattgatcattgaggaggcgattctcaagggacccatatctacagctgtgttaattggggggaggggggggtatggtttggtaatatggcaatttggccactactagtagataaaatgatttctttcacttcacaatcccaaatgattcgcttagtgcataaacatttaatttcatttcttcaatttgttctcctcttctaagtttatagctttcgtgctagcttcatcgatgttacccaccaaataaaaagcttgttcaggtagggcgtctaattccccggaaaggattagttgaaatcccataatagtttctgcaagaccaacatactttcccggagaaccagtaaaaacttctgccacaaaaaaacggttgtgataaagaagcgctcaatttttcgtgttcttgctacagttttatctacaagtttagtactattgattatcaaggatctcattatctttttcttttaatagttgtatctttcgctctccctcaactatagtgacaactgatggcagtcttgtgttctgctaacaagttcttttctatctgtgccgttcatactaatggtgcccctcattatttttaggcctcattcgcccgtcacatgtctaaccagggatttgatacatggattgtcgaagtgagaggttctggtctgagcatacgtgatcatgataattctgcttcatctccatcaggcgctttcgatgatatatctaatggcacattggctcttgataaatcaagcacattggaggttgcttcagttcaaagttctggtttctctggtattgattatgatgaccttggaatagttgcgttggatgacccacctttactgatggagatgactagtttctttgatcgaatttcaaaacttctggaagaggctagtttaaataaaaattttcatgagatcacagataagatttcggttctatctgaaatggtagaaagctctgccgttattggtccaatgagagaagaaagtctgcgtcttctgaagaactttcaagagcagattgactcatgggaacactttgtggcaactcagatgaatctaaattctgaatataattgggacttcgaccattacttggaggaggatatacctactgcggtgaggcgtcaccatccttttgtgagctataattgttgaatagttggcactgttgttatattcagtgagctaacagtgtaacagtgttttttaattattccatttgataatttcatcattagtgttataagattgtttttgtggaatatcgcttgacacacagttactacaggtggaatatattagacaacatagtagagtaaaagatgggaagctgcttgccattggacactcaatgggaggaattttgttatatgcaatgctgtcaaaatatggtgagacattacactgtattttgctgatgactgtttgcctgccctttactgttgctttttctatggaagtataattctactgctgctgctagaattggagccactattcaattatccaatgtaaagggaacattctagctgtaggcaatcaacaactactgcgcttgttttgctcagctttctggagttaacggtagattgttggacgtcttacaagttttacctttatatttattctagaaacacagtcaaattgttcatctgataagcaatatcatgatcgtttacagctcagcctactatctttcggttgtggatttttaaagtcacgacttattatttttcccttaatctcaaaggtttcgaaggagttccatcaaacttagcggctattgttactttggcttcctctgttgactacacgacatccaattcatcactgaagatgttactgccacttgtgagttcgtagtcgattgacagtttcaacttgataaagatgtttattacttttcatttttaaagtttttcttccttcattgtcatgaataaaactaatgagttcacttctcaggttcatcctgcgcaagcccttaatgtccctgctgttccattgggtacattattagcggcagcatatccctgggcatctggtccaccttatcttttttcctggcttaatcatcaaatatcagcacaggatatgatgcacccggagttgttgtccaagcttgtttttaacaacttctgtgagtactctttaattacacactgtcacactggattctgcatgtcatgcattttaagatttcagctttgccagaatgttactttaaagggtgttgccagaatattgttcaagaacacacagcactgtatatatgccatagtatccatatataggatttctgtactccagaattaattcataatacactgcattattaaccttttatgctatgatataaatatgggatgtctgtttcagcaacttttgtcaatggggttggatatgttcatttaagttgttatcatgtaatttgcaggtacagtgcctgcaaaggttgtccttcaacttacaacagcttttcgggaaggggggctatgcaatagaactgaaactttctcatacaaagatcatttgcgatattgtcagacccctgtcctagcactagctggagataaagatctcatctgtcctcctgaagccgtttatggtaagatgtggtgcttttcttgtctgctatctcagttgcttctatgaagattgctaactttttgtacatcatactcccatcttgtcagaaactgtcaagctcatacctcagcacatggtgaaatatggggtttttggaaagccagaaggccctcattatgcacactatgacttagttggaggtcgactggtacatattctcagtctcttcacataaaataaaatttgctgctccaattctgaaaagtcaaatctttttgtcatcctcttactcatgatttacacatgtttgtcccttgtacaggcaacggatgaagtttacccatgcatcatagagttcctttctcaccatgatcagtagtttatgtaacagtgaagctcctgaaatttcaatacgatgcggagtcaatgatacaatatatgttcacctcagatggtttttgagttgagctgaacaaactttccaaggttggccatgtgacatggccagctgcgcaaaatataggtaaacccacagaactcgtaggatgtatccttgtaaacaggtgtaccatgcgtcagtgcaccacttgttatacaaaacctataaatataggtatattacatgtgcccctagaaatataacaaattcaaaagaaattgtatgctgaactcattctttgaccttgtttccttagttgatgttgatccttcaaatacttggcttctgttgttgtaacaaaatgaaatggactgatatgtactgggatatactgttggcatgtagcgctgtctgcatttgtaatgaacagttctggaggtaatggaatgcttcattgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0359300, RefSeq:Os08g0359300