Os08g0360100

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Revision as of 12:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0360100| Description = CRS1/YhbY domain containing protein| Version = NM_001068170.1 GI:115476077 GeneID:4345375| Length = 3771 bp| Defini...")
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Gene Name

Os08g0360100

Description

CRS1/YhbY domain containing protein

Version

NM_001068170.1 GI:115476077 GeneID:4345375

Length

3771 bp

Definition

Oryza sativa Japonica Group Os08g0360100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:16670656..16674426

Sequence Coding Region

16670883..16670945,16671046..16671105,16671194..16671486,16671608..16671764,16671848..16672195
,16672294..16672424,16672664..16673129,16673672..16674298,16674347..16674379

Expression

GEO Profiles:Os08g0360100

Genome Context

<gbrowseImage1> name=NC_008401:16670656..16674426 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:16670656..16674426 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccacctcccctgcacctcttctccccgcatgtcccctcgacgtccgtctccccgccggaccccgccaccgaggcccctccggctccgaagcagcaccgtgggcccagaccggcgccaagaaaccccggctccgccaagcccctcaccgccggcgtccccggcggccgcacccgccgcgcggtcctcggaatcatccgcaaggtccgctccctcgagctctccgacccgcgcacacccagccccaatggtggtggtggtagtagtagcagtagcaccgcgaccgcgcgcgtccccttccacctcccgatacatccgccgccgccggagcgggaggaggaggaggagaagaaggggattcgcagggcggtgccgtgggccgcggcgagggacgaggagaccaaggtggtgctgcggcgggagaagaagacgcgggtgccgacgcgcgcggagacggagctggaggccggcgagctggagcggctgcggcgggcggcgcgggggaaggagcggtgggcgcgggccaagaaggccgggatcaccgacgaggtggtggaggaggtgcgggggcagtgggcgaagggccaggagctcgccggcgtgaggatcgtggagccgctccggcgatgcatggaccgggcaagggagattcttgagattaaaacaggaggcttagttgtttggacaagagggggcatacattttgtgtacagaggaagcagttacctagaaaacgcaaagcggcatcgtgactttgttaattataatgaggaactttccccagtaacatctaacaatcctacatcccaagggaaatattggagtaaagatgaaactttaaccaatgataatgatgaagctgatgataaggacgacaaacctatcaagggaacactatatgaaagagaagtcaacagactactggacagtttgggccctcgatttatcgattggtggtggaacacaccattgcctgttgatgctgatctccttcctgaggttgtccctgacttcaagactccatttagacaatgccctcctggtgtgagaccagcactagcagatgaggagctgacctacctgcggaagcatgcacggcctttgccaacacattttgtcctaggtagaaatacaaaactgcagggtttggctgctgctatactaaagctttgggaaaagagccttatagcgaaggttgcagtgaaagtgggtatccaaaataccaatcatgaacagatggccagaaatcttaagcgtcttacaggaggaactgtcatattgaggaacaaggattatattattatatatagaggcaaagattttcttcccggtggcgttgctgaatcagttattgaacgggagtctcaggtacatgaccagcaggcgaaagaagaggaggctcgattaaagatggctgactcacttcaaatgattgttggactatcatcggagagaagttatgtgggaactttcagagagtatcaggatttccatgatagccatgcacgtagaacaactgaaaacaacttcagaattcaactagaggcaaagaagcatcgattggaaaaggaactgaaagaccaggaatggagactttccatgcttaccaagaagattgaaagatcaaaccaagtgctggcaaagcttcatagttcttggagcccttcaaagaaagatggagacagagaactcttgacagaggaggaaaggaggatattccgaaaaattggcctaaaaatggatgaacatgtgctgcttgggagacgtggtgtctttgaaggcgtaattgaagagattcatcaacactggaaacataaagaggttgtgaaagtaattaccaagcagaaccaagccagccagatcacgtacacatctatgatgcttgaggttgagacaggaggcacattaatagcaatagagaggttcactaccagccatgccataatactttaccgaggaaagaattatcgtcggccaacaaaatcagcacccagtaatctcctgacaaaaagagaagcattacaaagatcaattgaggttcagcgacgagggtcaatgaaatacttcgctcaggagaggaaaaagtccattgatgaattgaagagagaactgaggaatgtgacatgggaaatcaggaagctaaaccatgatactgaacagtcttggacagcatga</cdnaseq>

Protein Sequence

<aaseq>MAPPPLHLFSPHVPSTSVSPPDPATEAPPAPKQHRGPRPAPRNP GSAKPLTAGVPGGRTRRAVLGIIRKVRSLELSDPRTPSPNGGGGSSSSSTATARVPFH LPIHPPPPEREEEEEKKGIRRAVPWAAARDEETKVVLRREKKTRVPTRAETELEAGEL ERLRRAARGKERWARAKKAGITDEVVEEVRGQWAKGQELAGVRIVEPLRRCMDRAREI LEIKTGGLVVWTRGGIHFVYRGSSYLENAKRHRDFVNYNEELSPVTSNNPTSQGKYWS KDETLTNDNDEADDKDDKPIKGTLYEREVNRLLDSLGPRFIDWWWNTPLPVDADLLPE VVPDFKTPFRQCPPGVRPALADEELTYLRKHARPLPTHFVLGRNTKLQGLAAAILKLW EKSLIAKVAVKVGIQNTNHEQMARNLKRLTGGTVILRNKDYIIIYRGKDFLPGGVAES VIERESQVHDQQAKEEEARLKMADSLQMIVGLSSERSYVGTFREYQDFHDSHARRTTE NNFRIQLEAKKHRLEKELKDQEWRLSMLTKKIERSNQVLAKLHSSWSPSKKDGDRELL TEEERRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQASQITY TSMMLEVETGGTLIAIERFTTSHAIILYRGKNYRRPTKSAPSNLLTKREALQRSIEVQ RRGSMKYFAQERKKSIDELKRELRNVTWEIRKLNHDTEQSWTA</aaseq>

Gene Sequence

<dnaseqindica>3482..3544#3322..3381#2941..3233#2663..2819#2232..2579#2003..2133#1298..1763#129..755#48..80#atccgcctctcattctccgtctcctctccccaactcctcgcctcgccatggcgccacctcccctgcacctcttctccccgtccccgcggccgccgtcgccgaccccgccgccgtggctccacggcccgcatgtcccctcgacgtccgtctccccgccggaccccgccaccgaggcccctccggctccgaagcagcaccgtgggcccagaccggcgccaagaaaccccggctccgccaagcccctcaccgccggcgtccccggcggccgcacccgccgcgcggtcctcggaatcatccgcaaggtccgctccctcgagctctccgacccgcgcacacccagccccaatggtggtggtggtagtagtagcagtagcaccgcgaccgcgcgcgtccccttccacctcccgatacatccgccgccgccggagcgggaggaggaggaggagaagaaggggattcgcagggcggtgccgtgggccgcggcgagggacgaggagaccaaggtggtgctgcggcgggagaagaagacgcgggtgccgacgcgcgcggagacggagctggaggccggcgagctggagcggctgcggcgggcggcgcgggggaaggagcggtgggcgcgggccaagaaggccgggatcaccgacgaggtggtggaggaggtgcgggggcagtgggcgaagggccaggagctcgccggcgtgaggatcgtggagccgctccggcgatgcatggaccgggcaagggagattcttgaggtgattgcttcacattgctatctgctgctacttgatttcctggacgatgagcttcttgttgtggtgatgcaaaagcatttgttgcatctttgtgaaactttggagttcatctttagcttcatgtacagcaatgtagctaagtaacttagtttcgaaaatggaaagggggacgatcttgtctctctttcttcaaaaaaaaatgtagagcaatgtagctagggtgggttcatttttggcatcatgaaccacaattctgctaggaagttgcaaatgtgaccagcattttctggcagataaaatgattgaattgatgcaggtggtgctacacccgttggtggactgctggtgcttgattcaagatttttattggctgaaattgttaggttggcttagctgatgaattatgtttggcttagttaaactatggttaaacagagaaactattttaacgacaccctctttaccttgaattatttaagtccaaatcattattatcaattcaaaacctttgatatttatttttttaattctcttttcattagattaaaacaggaggcttagttgtttggacaagagggggcatacattttgtgtacagaggaagcagttacctagaaaacgcaaagcggcatcgtgactttgttaattataatgaggaactttccccagtaacatctaacaatcctacatcccaagggaaatattggagtaaagatgaaactttaaccaatgataatgatgaagctgatgataaggacgacaaacctatcaagggaacactatatgaaagagaagtcaacagactactggacagtttgggccctcgatttatcgattggtggtggaacacaccattgcctgttgatgctgatctccttcctgaggttgtccctgacttcaagactccatttagacaatgccctcctggtgtgagaccagcactagcagatgaggagctgacctacctgcggaagcatgcacggcctttgccaacacattttgtcctaggtgagtttgctattagtccccatattctgcacttgtcagtcactttattgatagtttcaaatgaatatgctttataggatgatttaagtgttgattgtcactactatctattgtaacatcttatgcacacataacctatttccttaaagttccacaagcattattgtatattcataagtaacccatcataagatgtttatatatgtagcccaactataatcttgactaatttctggcaggtagaaatacaaaactgcagggtttggctgctgctatactaaagctttgggaaaagagccttatagcgaaggttgcagtgaaagtgggtatccaaaataccaatcatgaacagatggccagaaatcttaaggtgtgtattgttctcatgaaatatattagagtcattaggatttctttgatatccatatgttcaatcttcatctgtgacactgaatcttctcagtgcagcgtcttacaggaggaactgtcatattgaggaacaaggattatattattatatatagaggcaaagattttcttcccggtggcgttgctgaatcagttattgaacgggagtctcaggtacatgaccagcaggcgaaagaagaggaggctcgattaaagatggctgactcacttcaaatgattgttggactatcatcggagagaagttatgtgggaactttcagagagtatcaggatttccatgatagccatgcacgtagaacaactgaaaacaacttcagaattcaactagaggcaaagaagcatcgattggaaaaggaactgaaagaccaggaatggagactttccatggtatgctttgatctaactcgtcttgtaccttcttttgaattcccgaacttccaatggtaatgtaaaaatggtacgtactgcagcttaccaagaagattgaaagatcaaaccaagtgctggcaaagcttcatagttcttggagcccttcaaagaaagatggagacagagaactcttgacagaggaggaaaggaggatattccgaaaaattggcctaaaaatggatgaacatgtgctgcttggtatagccttttgtatcaaactgcaatattccatgcctatatgtgtctctatccttgaaaccaagaaaagctatttaccatcctatgatgaaaggtattcatccatggttttcccttgcagggagacgtggtgtctttgaaggcgtaattgaagagattcatcaacactggaaacataaagaggttgtgaaagtaattaccaagcagaaccaagccagccagatcacgtacacatctatgatgcttgaggttgagacaggaggcacattaatagcaatagagaggttcactaccagccatgccataatactttaccgaggaaagaattatcgtcggccaacaaaatcagcacccagtaatctcctgacaaaaagagaagcattacaaagatcaattgaggttcagcgacgaggggtatgaattgacatataattctcccttctccccttaatttccaattttctggctgtctgggtatctcatttcctcattcgttttgcagtcaatgaaatacttcgctcaggagaggaaaaagtccattgatgaattgaagagagaactggttagtttacatgctgtttatatcaatacgacgaaatgaaacttcatatgcttaagcaactggaattttatgtacttgatttatcactcttgtgttacagaggaatgtgacatgggaaatcaggaagctaaaccatgatactgaacagtcttggacagcatgatcgctatcaacattgaagattggaataacgattcatcctctcttttttttttcgtttttaacatgataactacaaagaacaaagtacacagaggccactagatctggtaggtatggtagatatggccacaatgaattatcttgcaagtgtgaagatgtttttttttttgtttatgtacatgtgatacactaaagcacatgagagcagaatcattcaatttggctctg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0360100, RefSeq:Os08g0360100