Os08g0363000

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Revision as of 12:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0363000| Description = Protein of unknown function DUF295 family protein| Version = NM_001068175.1 GI:115476087 GeneID:4345381| Length = 32...")
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Gene Name

Os08g0363000

Description

Protein of unknown function DUF295 family protein

Version

NM_001068175.1 GI:115476087 GeneID:4345381

Length

3299 bp

Definition

Oryza sativa Japonica Group Os08g0363000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:16885598..16888896

Sequence Coding Region

16885967..16887186,16887311..16887371

Expression

GEO Profiles:Os08g0363000

Genome Context

<gbrowseImage1> name=NC_008401:16885598..16888896 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:16885598..16888896 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccagcggccttggtggcgtgcagcggcaagcgccggcggcggacggccaccactcatgctgctcgggactcatcgtcgtgggcttctctggcggaggatctggtgagcctgataggctggcgggtgctggctggagatgtgcgagactacatctgcttccgcgccgcgtgccaccactggcgctcctgcaccgccagcccgtgcggccgcggcgttgtggacccacgcttccacccgcggcggtggatgatgctccctgaggggaacggtctctacccgggccacggcatgctgcgtggcttcgttcgcttcttcaacctctccaccggcgctttcgtccgtctcaagctgcccatcgtccgcgaccaccgcatccttgactccgtcgacggaatcctcctcctgcagcggaaccgtgacaccgcggtccgtcttctccaccccttcaccggcgacatcgtcgacttcccgccgctggacaccttgctgccgtacatgggccgccggtcggaggaatatctcagagatgtcgctgctgcctccataacatcatcagctgatgatcaagccgtcttgcttatgatatggttattccgcacggtgcgcgtagccttcgccgcctctggggataagcagtggagggtgtcgagctggtccatgtaccaagcctatactccattgccattccaaggcaagctatacatattggatcaagccacggcttatggtggacctgaggtcttgcagatagacccacccctgcaactgcaactggaagggacgacggagctctcgctaccaccaccaaaatcaattgctaaatgtccagcaaggacacctgactcattctttctctaccatttggtagaatgtgactctgacattctgttggtcacctttggtgttagtgtgtatgcacaaatttcagtttacagactagctgatcttatttcgggaacaactgtcccggtgacttgcatcggcagcaattcccttttccttggtaataggaatctctgtgtcagctccaaggcgtttcctaccattgtgggtgatgccattgtgttttaccatcagaaggagaattatcttgcacaataccacctcagaagcggcacattgtcacccacatcagatggatgtatctttgcgactaatatgccaagtcctagtagcatcattcaccatatctacacctgttgctttcgtacacaatggaccaagggacatttattgtttcaaagggagaacagggcatggcagatgaaacggaagtag</cdnaseq>

Protein Sequence

<aaseq>MPAALVACSGKRRRRTATTHAARDSSSWASLAEDLVSLIGWRVL AGDVRDYICFRAACHHWRSCTASPCGRGVVDPRFHPRRWMMLPEGNGLYPGHGMLRGF VRFFNLSTGAFVRLKLPIVRDHRILDSVDGILLLQRNRDTAVRLLHPFTGDIVDFPPL DTLLPYMGRRSEEYLRDVAAASITSSADDQAVLLMIWLFRTVRVAFAASGDKQWRVSS WSMYQAYTPLPFQGKLYILDQATAYGGPEVLQIDPPLQLQLEGTTELSLPPPKSIAKC PARTPDSFFLYHLVECDSDILLVTFGVSVYAQISVYRLADLISGTTVPVTCIGSNSLF LGNRNLCVSSKAFPTIVGDAIVFYHQKENYLAQYHLRSGTLSPTSDGCIFATNMPSPS SIIHHIYTCCFRTQWTKGHLLFQRENRAWQMKRK</aaseq>

Gene Sequence

<dnaseqindica>370..1589#1714..1774#gttctgcgccgtctcgccggtctccatctccatcaccggagaacagcgatgtcggcgacctactgcttccgccgcatacttttgcctttcactcctcgcgcccagtcaatctccccatctcctcggcctcggcaatagtatcctcgcgagttcgcccgccggcgccaatctccatcccgcgagcagccgtgccggcgtcctgctgcttccgcccccggtgagcacccgtgccctacactcatcgtctttattccccatcttctgttgtagatctgggatattttttcgctttgtctcaatcctagtactaataacaggtttcccccaaaaagaaatatatttggtgcccctggcatccggtagatcggcatgccagcggccttggtggcgtgcagcggcaagcgccggcggcggacggccaccactcatgctgctcgggactcatcgtcgtgggcttctctggcggaggatctggtgagcctgataggctggcgggtgctggctggagatgtgcgagactacatctgcttccgcgccgcgtgccaccactggcgctcctgcaccgccagcccgtgcggccgcggcgttgtggacccacgcttccacccgcggcggtggatgatgctccctgaggggaacggtctctacccgggccacggcatgctgcgtggcttcgttcgcttcttcaacctctccaccggcgctttcgtccgtctcaagctgcccatcgtccgcgaccaccgcatccttgactccgtcgacggaatcctcctcctgcagcggaaccgtgacaccgcggtccgtcttctccaccccttcaccggcgacatcgtcgacttcccgccgctggacaccttgctgccgtacatgggccgccggtcggaggaatatctcagagatgtcgctgctgcctccataacatcatcagctgatgatcaagccgtcttgcttatgatatggttattccgcacggtgcgcgtagccttcgccgcctctggggataagcagtggagggtgtcgagctggtccatgtaccaagcctatactccattgccattccaaggcaagctatacatattggatcaagccacggcttatggtggacctgaggtcttgcagatagacccacccctgcaactgcaactggaagggacgacggagctctcgctaccaccaccaaaatcaattgctaaatgtccagcaaggacacctgactcattctttctctaccatttggtagaatgtgactctgacattctgttggtcacctttggtgttagtgtgtatgcacaaatttcagtttacagactagctgatcttatttcgggaacaactgtcccggtgacttgcatcggcagcaattcccttttccttggtaataggaatctctgtgtcagctccaaggcgtttcctaccattgtgggtgatgccattgtgttttaccatcagaaggagaattatcttgcacaataccacctcagaagcggcacattgtcacccacatcagatggatgtatctttgcgactaatatgccaagtcctagtagcatcattcaccatatctacacctgttgctttcgtacacaatggttagtgacatgttttttatttttttcccgtcattgttctctttaataatagttattcctttcaatggagcattttgtgctctgcttggtaattaagctcattgtttcccctctctacctgtaggaccaagggacatttattgtttcaaagggagaacagggcatggcagatgaaacggaagtagggatagacggggtaagtcttgcctccggtgcaatgattctgcttgaatgtatgcatttttggcttctactatgcacccaactctcaatacaactgattgatcaatttattaattattgagtctttttcctagtattaaagtgaaagcaagatggctgcagagctttgcattttaattagatattatgcaactatctgggcacacatttctcaattggggtttgcaaatcttcgtgagaccctacaagtgtatatatttattactaacattgattgcttatttttgttgagatacactgaaaaagtaattgtcttctgatgaattgtgtcgtgtaaacaacttgctttcttctaattgtatgacatgcaatcttttgcatgtttgcgagaaaaaatacgctgtgcattttagttacaattattattatgcataagatgaattagtaggttatgctatttagagtttttgttttttgaaaagaaacatattcggtgaggaaaataagatgtaggttaagatttgcatttgcactttacagcacaaatggacagttagctgcacccatctgcatacaggactgaaaatggtctcacagctgcttgtatggagctactaaaggagtttgaacaagtaatgctggccattgaggttatgcaacctacaaaacatatgaaagtagtagtaatgaccttgatgtaacacaatttgaactgtacaatgtgcctgtagagtgtccatgttctctcttgtcttcttaggtaactcgccaagcatcacaaccacaattagcacagttgaatttgattatggttgtcatttacaattgcaatgttatcactgttacaaatcatacttgactagtttatttcttctgttagcactgaacttaattagcagagagaaagcaaatgcatttctgtgaggatgtgcatatgtatttgcaagttattgcattgtttgggagttgaacacacattgctcacatgttgattttccagaagctttaaaaggatagtcttaatatgttcagtggagatgctagtttgccattttcatatttaggatctaagacattctctatctaaatgctttatcatgcatgtgtttcctactattttatttgattagattggttcagttagtatagtgatgactaacttgtcgcctgtttttctacttgggtcctgctaggcgtaaacaactcttgttttgtgttggtggtggtgcctgcctgcctggttttccttcagggatatatttgttgatctacaggggaagtagttcccgggggctgtgaaagttttgctttggtacttataatcatgttactatttatgtgacaaagatgcttccctctgttgttgaatcaggcaactgtttcatgttgaaacaactaaattaattattgtaattggcatggtattttccaatggagttatgtaaccctggcttgtaaagttcttgtgacaattgatcaaacttccatcatcatagtagaattctaatatatccttatgagctagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0363000, RefSeq:Os08g0363000