Os08g0369800

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Revision as of 12:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0369800| Description = Carotenoid oxygenase family protein| Version = NM_001188613.1 GI:297726356 GeneID:9267611| Length = 6602 bp| Defini...")
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Gene Name

Os08g0369800

Description

Carotenoid oxygenase family protein

Version

NM_001188613.1 GI:297726356 GeneID:9267611

Length

6602 bp

Definition

Oryza sativa Japonica Group Os08g0369800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:17316917..17323518

Sequence Coding Region

17322272..17322850

Expression

GEO Profiles:Os08g0369800

Genome Context

<gbrowseImage1> name=NC_008401:17316917..17323518 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:17316917..17323518 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttgtggaatgcaggcggaaaccctctctatggaggcctccaatctgttagttccattttcgggcagtcccataacatctgggtggaaggagaaggcatgctccatgctgtatacttctgcaaaagtaataacagcacatggtcaatctcgtacaataaccgctacgtgcaatctgaaacatttaggattgagaaagaacgtcagaaaccatgctttctccctatgaccgatgggaaccctcccgccatgctcatcgcctctgttcttaacacagtatggtgcctgctgctattactacatcgcatttcttctgtaatttttttgggattgtcgcaaacattttggaaatgctatatgttgactgttgagtatgtgcagctgagattccgaaaggtaatgaaaagcatgagcaacactagcgtgtttgagcatgcagggagagtttatgcagcatcagaggatgatgttccccacgaggttgacttgcataacctcagtacactaggcagctggcatctcggtggtgaatggaagttgccatttacagcacaccccaaggtcggtggtccttttgcctag</cdnaseq>

Protein Sequence

<aaseq>LWNAGGNPLYGGLQSVSSIFGQSHNIWVEGEGMLHAVYFCKSNN STWSISYNNRYVQSETFRIEKERQKPCFLPMTDGNPPAMLIASVLNTVWCLLLLLHRI SSVIFLGLSQTFWKCYMLTVEYVQLRFRKVMKSMSNTSVFEHAGRVYAASEDDVPHEV DLHNLSTLGSWHLGGEWKLPFTAHPKVGGPFA</aaseq>

Gene Sequence

<dnaseqindica>669..1247#agggagaccaaaaacggtgccatccatgtatacccttcaaccacgcgtatgcatctccagctccaggtcatccatctcccctaaagctgctcgtctatctcatcagaaagcatccactggaaaggttggcaatcttgcacacagcaatagatgtgtgatccttcagtgagtgagaaatgtaaaccaaatactctgctttgtttcatgtttcagccgtatttcagggagattcaggtgcatctaagctccaaactgggagaggcatcaaatgccatgaacagtacttaccaacagctgctggattcatttgttgatcacaccttcacattcaaatgtcaacctttgcgtcccactgaggtaaatacaaatggttcgattctgttccagttaacttgctgacaaggagctgaaaaacgagcagaaggcaaaatattatatgcataccttgtgttggcacttctatagagcaattttgcaccagtcgacgagatcggggagatcacacgggttatagagattgaaggagagattccagcagattttcctgagggtgtctacataagaaatggtaattcacatatgcaagcttattagtaatacgtttgaccgaataagatttcctttttttttcacaaaatgtcatggaacaaacccagatgctctgatgattgtggaatgcaggcggaaaccctctctatggaggcctccaatctgttagttccattttcgggcagtcccataacatctgggtggaaggagaaggcatgctccatgctgtatacttctgcaaaagtaataacagcacatggtcaatctcgtacaataaccgctacgtgcaatctgaaacatttaggattgagaaagaacgtcagaaaccatgctttctccctatgaccgatgggaaccctcccgccatgctcatcgcctctgttcttaacacagtatggtgcctgctgctattactacatcgcatttcttctgtaatttttttgggattgtcgcaaacattttggaaatgctatatgttgactgttgagtatgtgcagctgagattccgaaaggtaatgaaaagcatgagcaacactagcgtgtttgagcatgcagggagagtttatgcagcatcagaggatgatgttccccacgaggttgacttgcataacctcagtacactaggcagctggcatctcggtggtgaatggaagttgccatttacagcacaccccaaggtcggtggtccttttgcctagttcttcaaaatgttaagctaaatagcttacacatcagatttttatggcccgtaaatagggagtaccatgaccataaataaagtaatgagaatgcaatgcatgtgcttagattaactgacaagcatcacatagccgatttgacattggagatgaacaccagaaccaagcatagcatctatgaatactgtctataagttaattcttacatggaaacagttagattgttttctgttggtaaattagtacagcattactctgcttcaaaactaagaagatagctaaagattattgcagaaatatccatggaaatctgtaacttttaaacatgtttccaccacaacagatggccaccacatcatttaaataatgacaagcaaaaatatacaaatcaaactgaaggtagatacagccaaaattcagtccctataagtttcattcatctgaactttccaagttttccaataataacagttcaactactgtagttaaagccactagtgctccattgtttcatttgtacatctgttagctttcttttgtcatgttttagctatgcaatgcatcatgtccacggtaacaggtaatccctgggtcaaaagagatggtcattttcgggatcaatgcggtacagcctttcctaacagttggcataatctcaggttatctactttcataattccattgtcttctgctacatctcctgaataaaaatggggtcatatgcttaacttcataaacatcacagaggatggagaaaaacttaaacaaaaggttggtctcaagctagacagatgcacatattgtcatgaaattggggtcacggggacgtaagtttcttgcctacagctagctatatttgtttttatggctgctcttctgatttcattagatatttagatgcatgtaaaattttgctcttatttcaaatagtatatttatttaatttcaagaattgctcttatttcaaatagtatatttatttaatttcaagaaatggaagatactaaacagcacatttcacatagactgatgcacaagaaaacaatcaatcttggtcgcttcttgaggattcttaatttttattttttttcaacagggaatttttaagtaaaaaatagcaattttattgtgaagaacagaggaatggtgtcttatgaactagattagaaccaactggaagctagtagaaaaccatcatattcgtttctttttcatgatatgaagtacactaattttgtctggtttactgtcatttacaaatttcttaaacattacacagaaataaaacaacaatgtcttaactcacatgggatggacatggactccataaaaaatctattagaatttgaaacacagagcactattaatccctaaatgatatatatggaataaccaaatccatggatcccagttatggcagcaaccagctgagttgctctgctactaactgtaggattgagaactcacattctaactgtgcctaattcaatgcttgcaattagtcagcagctcagtcaatatttgtctagcagttttctattgaactgtacagaataaccaaaaaaataatatattcattttttactatgccacataaaataagctataacttcattaaagtcaaaatagttctattaaagtcaagttctcttgaagctccacttttcttatataaaagtaaagtggacctaaaaactttcaaatatgcatgaacacaatagctttaataggatgtaatgaattttctagaaatagcaaaccaattagaaaaattagtgaaatctaacatcctcaatgattgcaggtacaacatcatcatagattcaccacttaccctcaacccaactaggatgctaagaggggctccgtaagtacttggtatagctaataccaaaaatccaaaattattctcacaaatcgaatttatccttcttcatccctcatatagagtgcttgagtttgaagaggaaagctattcaagaattggggttatgccccattacggtgatgcagactcagtaatatggttttatgtagaaccattctgcacattccatcttgtcaattgcttcgaggaaggtcatgaggtaggcatctatgttatctctaaatacttctacagatctaccttagttagacacaggtccactgcaattttgaactacagtaaatgtgtgttcaaaggaagcagcataagcaatagttgagtaactcagatagtcagatgatcaaatagctaaagcagcagctcgacgactacctgtttctcttgtgactagcaaaatgcccgtgtgttgttacagaattaaaaatatcacatcggcacatttcaaagaagaaatctattttgaattttagagcttaattttagaattagtgagagatttttcatctttttatattttagccgtaaaatatttcaagcggactcaatcgacttataccttagactctacacaactagtggacagtggtcccacatatcagaaatttggggaatttggtggtggggtggtggtggcagattcatgactcatcaccacaattactatcttttaaaggagtatagatttatattttagccgtaaaaagtttcaagcggactcaattgtcttgtactttagactctatgcaactatttggagagggggtagacagtggtcccacacgtcagaaatttggagagtttggtggtggggtggtggtggcagattcaccactcaccaccaccactactctcttttaaaggagtgcagaaactcaatgtcaatttctcacccacatcaagcactcaaatcttttacatatatacaaaattgtaaaccttcctaaaagttgtcacttgtgaattgttccattgtatgtccaatctatgtgtatttcactgtttgtgggatatccttgcatactctaatttgctatcctgattattattaggttgtagtaaggggatttcatgtaccaagttctgcgattatgggtccaaggcagaagaacatggttatggatacttccagtcaagaaccaaatgaagagaacttttctcgcttgtatgaatggagattgaacctaaaaacaaggactgttgcaggcaaatacttaactagcttagatgttgccttggaattcccagttatcaatgataaattttctggcctacgccataggtacgcatatgtacaagtggcggattgttcagcttgtttcggaggtggtcatgaaataggtattgctaaatattcattttcattttttttcatacatatacacactttgagttgaacaagaaaattgagcggacaatacccacaagattggtaagctctcaaattgcttttaccatatagtgcatcaaaaagtaatactactctgataattgttttttccttcatccaaaacacatgtgaaagaaaaggtaccttcagaataattaaagaaaaggtacacatgcctgaataataaaatgttcattctgcttgcaagccttcatttatccttcaaaactgatttcatcagtaggttacttaaactacaaatgctattgagcaattgtagtttagggagatcaagttgctccttagtactaaacaattgaactgcaattacagaattgctgatactatggtccgaacagatggactctagaactagaattgcaattgcttatctctgctattacacaaatacatcctccttcccttcccactcccatcccacggacctgtttggcatagctccagctccaactccacctctcctggagctggagcccaaccaaatagtttcagctccatcagaaataggagcggagctgggtggagcactcttacaaaatgaactagagaggtggagctgggtttaggctgctccacaactccactccagacccaactcctggagcagaatttaggagttggagctctaccaaacaggccccacgtatagaaaaacccgctccaaaaaaaatggtgtaccaaaaaaaactgaccaaccaaaagaattatgggagaacagaaaaaatgaaccacgttcctaactaaccaactaagagagagaaaaatacgggagaaaaactaaaaccaccccgttccattgcaatagacaggcatctaaatagtatatcataatttgggtaaatctgtattccttctgtcatgtttcttatatggacatttgactacttctcataaaataagaaaatataccacataactgcgtattctctataaagcagatgccatatattagagtacgttctagcttgtcatactataatgttgatctatagaaactaatttcagtctaaatcttgcagctcgaccaaagtttattggttttgcaaaactttgtcttgaagaaaaacaaaacatagctactaaggtatcatatgatctataatgaacaagtaattcgctattcctatcatgcataattggaaactattatgatcttctaatgacatgaaacaatttggaattctcaaagcagatagacagagaagatctaataaaggtagagtatcatcagctagcaaaaaatcaattctgctcaggagtaacgtttgtgcctaaggcagcaggtgcgcatgaagatgatggctggatagtttcatttgttcatgatgaggaaaccaatatatcaaaagtatgtcctcattaatttcaactctattgttctatgtgtcctacaatgtctcgataacatatggaaatcagttttctgctaatcataatgcattctacaaattatcgattccagcattttacttgcaattgcttttctaaatgtaaaacctactaaatgtccgttttgtttctccaaagatataagacttgagatatggcatgcaagaagttatcagaacattagaaattgggaccggacctactattaatcagaagttcaaatgatttaacaataacagatgtattgataaactattcgcaggatcaaattcgtatggtaatgcttcattttcttacgttacaggtacacatcattgacgcccgaaactttgagagtgaacctatagccaagataatattaccacaaagagtaccctatggtttgcatggagcattcattacaaaaagaacatgacaagagggattattctttaagtatgccatttacaattaactttatatagtctatagtgacaactgccaagatgtatttataaatgatgtgatgatttgagataatgtacattgttcaatcttgagggtgcaagttgtggaactagattggtgccaccttatcatgaaagatactctgtatcttctttttctggaaattgcttgtacccataaatatatcagttagatagcataatctttgttcagttgttcttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0369800, RefSeq:Os08g0369800