Os08g0376200

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Revision as of 12:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0376200| Description = Similar to Nudix hydrolase 15, mitochondrial precursor (EC 3.6.1.-) (AtNUDT15)| Version = NM_001068211.1 GI:115476159...")
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Gene Name

Os08g0376200

Description

Similar to Nudix hydrolase 15, mitochondrial precursor (EC 3.6.1.-) (AtNUDT15)

Version

NM_001068211.1 GI:115476159 GeneID:4345423

Length

3065 bp

Definition

Oryza sativa Japonica Group Os08g0376200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:17731574..17734638

Sequence Coding Region

17733355..17733525,17733678..17733797,17734163..17734363

Expression

GEO Profiles:Os08g0376200

Genome Context

<gbrowseImage1> name=NC_008401:17731574..17734638 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:17731574..17734638 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtttcttgcctaaatttgagattgtcaggcgaggttgcattgccaggagggaaggctgaggaaggtgatgctgatgatgcagcaacagcactgagagaggcaaaggaggagattgggcttgatccttctttggtcactgttgttgcctctttagagcatttcttgtcaaagcatcttctggtggttgttcctattgttggcatcctctcagatatagaagcatttaagcctgttcttaatgtcgatgaggtagatgacatttttgatgtaccgctggagatgttcctcaaggatgaaaataggacatctgaggagcgcgaaaagatggggcagacattcacaattcattacttcaattatgagaaagagaaccaaaagtacttaatctggggcctgactgcacgcatcttaattcatgctgcttcagttgtataccagcgcccaccagactttcccgagcgaagagtacatttcaacctgccaaagttctga</cdnaseq>

Protein Sequence

<aaseq>VSCLNLRLSGEVALPGGKAEEGDADDAATALREAKEEIGLDPSL VTVVASLEHFLSKHLLVVVPIVGILSDIEAFKPVLNVDEVDDIFDVPLEMFLKDENRT SEEREKMGQTFTIHYFNYEKENQKYLIWGLTARILIHAASVVYQRPPDFPERRVHFNL PKF</aaseq>

Gene Sequence

<dnaseqindica>1782..1952#2105..2224#2590..2790#attctcaccttctccgatctctcatccttcccatggtggggacgacggaggtggagggcatcgaggcgctcgtccgccgcctcaggctgtaccagccgcctccctccccgtacgacggcgcctcgaccacggcggccggcggcggcggcgagctgttccggccgcggagggccgccgtgctggtctgcctcttccgccgccgcggaggcgacggcgagctccgcgtcatcctcaccaagcgatcctcctccctctccacccactccggtgagctcgcttccttccttccttcctcctccctcgcatcgccttcgcgtggtgtggtgtggtgtgggggggtccgttgggcgatcgggcgcgagtgcgatcgatcggattcttgcgggtaagctcggagatttgtcggcagcggggctcgccattgcggtccatgcgagcggtaggttggggaatgtggggggaggggggcgggcattccctaggcgctttcttctttccatcggtccccaagggggattggccgttagttcttggcatttttgctaaggtcaatgaagcaaatataattgtttctgagagcatagaggagcaagagttcgtgattttttggtggattttgttcaggtattttagtggcatagatgtaagtttcttctgtttctagtgtcctctacggtgcctatagtagtttatataaaaaatattagagtaaatttcacaaaaatacaggtattttgaccaaattatcacaaaactacaactatagatttaatgtgttgtatcacaaaactacaactacagatttagcatcaaatttatcacaaaactacagttttaaggttaagtatcacaaaaatgcatatttaatattgaagtaatcacaaaactacaacttggagtttagatccctagcaccattgttatattggagctataaacattattgctttctgactaaattggttctaaacttgtagtcttgtggtaatttagttaataaacatgtagttttgtgacacttcatcataaatgtgtagttttgtgatacaccgagttaaatctgtagttttgtgataattttatcatagtattatgtcagattgaaacattttttctttttgggggtgagggggggggggtgttaatatatagttcacaaatatgatagggagtcactttctagtttctaccatgtgggtgattcattcatgaagttagtttacaaatgatatagttgtttctctcttgtcttgtccacttcaacattattagccaactggcttttgtggaatgttttgaacaaacaatttgtacagatgattggacttatactaggaacatcatagcatttcttacttcggtgtctacttgagaaaaacaagtagggtgcatcagaatttacaaattttaagcgacttggcctcacctcaggaattgtttgagcaacttgagatttggttctgaagtgaaatgaaacaagctgactttctgaaatacttttgaaaccaagcctgctcatatattttcttgttatagattttgagtttggggacttgagctcacaaatggtctcaagataggtttggcttacacaagagttataaattgagcttctggctctactagagagctgacttggtttgagtcagcatattcaggtgagctgatccaaatgtagtctgccctggctcattttatctaaacttgcttcaactacaccccaaagtgttgatggatgctcatagatgcccaatgctgcttctatgctttttcttaactaagtttcttgcctaaatttgagattgtcaggcgaggttgcattgccaggagggaaggctgaggaaggtgatgctgatgatgcagcaacagcactgagagaggcaaaggaggagattgggcttgatccttctttggtcactgttgttgcctctttagagcatttcttgtcaaaggtgcaatgcctttcggtcttcttttacatcgaaactgaaattttttcttagatcagagaaaactgtgttgcaatgcatcaataaaaaatagggaaatctttttttattttttttctggtgttacaaatacaaatctttaaacattcttgcagcatcttctggtggttgttcctattgttggcatcctctcagatatagaagcatttaagcctgttcttaatgtcgatgaggtagatgacatttttgatgtaccgctggagatgttcctcaaggtcagtttatttatcttcttactgtattaattaaaaggcatcacattgtttgtactttatgagtagtaaattttttacatccttcattccatgttcatgacatactgacatttgcagtttactgtacaaaataacaattcactgttaaaaatgtccaggcataactgccatagttaccatgctgcagtgatttactttggaacatgctctgttatgtacgttgaactgctttggaaagttaccagaattgcatgggttaatacagtaaattaattattatgtgcaaataatggcaaaagaaatctgcttcttttttctttttttttgggacattgtgacatccaatccattctggaacgctgcaggatgaaaataggacatctgaggagcgcgaaaagatggggcagacattcacaattcattacttcaattatgagaaagagaaccaaaagtacttaatctggggcctgactgcacgcatcttaattcatgctgcttcagttgtataccagcgcccaccagactttcccgagcgaagagtacatttcaacctgccaaagttctgaaggggtcgttggcagtgccatggatcagcatatactaaatactgttaacttactatggagactcaattataccgattgaagagcatggcggaaaaaaaatcccaaaaaaggttgctggagaatatatattttctattctttgcaccattctttacataacacgctgatgttaacatttgttgatgctgagttatctgagtaacccccatttgctccctgttgatgtcaccaaacagttgcactaatacagttgggttttatatgtgaagtataaa</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0376200, RefSeq:Os08g0376200