Os08g0377400

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Revision as of 12:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0377400| Description = Exonuclease domain containing protein| Version = NM_001068218.1 GI:115476173 GeneID:4345430| Length = 4717 bp| Defi...")
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Gene Name

Os08g0377400

Description

Exonuclease domain containing protein

Version

NM_001068218.1 GI:115476173 GeneID:4345430

Length

4717 bp

Definition

Oryza sativa Japonica Group Os08g0377400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:17818099..17822815

Sequence Coding Region

17820125..17820292,17820511..17820589,17820681..17820745,17820816..17820904,17820997..17821105
,17822274..17822358,17822494..17822759

Expression

GEO Profiles:Os08g0377400

Genome Context

<gbrowseImage1> name=NC_008401:17818099..17822815 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:17818099..17822815 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttctccgccgccaccggcggccgccgccgccgcgagcccgaagcggaaacccaagcccaagccgaaggcagccggcgcctccaccctaaaccctaactgggcgcagctccagtccaagctcccccgccccgtcgccgccaccaccctcggcaagcgcaagcaccgccccgaccacccttctccggcccccgcgcccaccgagcccgccgcggaggaggaggcggcggaggtcaagctcgtgcccacctccgacgacaccagcttgacgaaggcggtcgctgtggattgcgagatggtcggggtcggcgcaggcggcagcaagagcgccctcggcagagtcaccttggttaactcttggggtaacgttgtatatgatgaatatacaagaccggtagagcggattgttgactaccgtacccatattagtgggattagaccgaagcacatgaataaagccaaagatttctgggttgttcagaaagatgtagctgagctgatcaaaggaagaattcttgttgggcatgccttgcaccatgatcttaaggttttgctactaggccacccaaagaaggacataagggatacctcagaatatgaggtttttcgaagggaagggaagaggagatcactgaaagatcttactgctcaagtacttggtgctaaaatacaacagaaagagcattgcccaattgaggatgctcgtgcagcaatgttcatttacaacaagcataagaaagtatgggagaagaatatgaaagaacaattcagatttagaaagaagctcaagaagcgaggcaagaagaaatctgctgaaggcagtgggaatgatcctaatgttcccacggttcttctatag</cdnaseq>

Protein Sequence

<aaseq>MASPPPPAAAAAASPKRKPKPKPKAAGASTLNPNWAQLQSKLPR PVAATTLGKRKHRPDHPSPAPAPTEPAAEEEAAEVKLVPTSDDTSLTKAVAVDCEMVG VGAGGSKSALGRVTLVNSWGNVVYDEYTRPVERIVDYRTHISGIRPKHMNKAKDFWVV QKDVAELIKGRILVGHALHHDLKVLLLGHPKKDIRDTSEYEVFRREGKRRSLKDLTAQ VLGAKIQQKEHCPIEDARAAMFIYNKHKKVWEKNMKEQFRFRKKLKKRGKKKSAEGSG NDPNVPTVLL</aaseq>

Gene Sequence

<dnaseqindica>2524..2691#2227..2305#2071..2135#1912..2000#1711..1819#458..542#57..322#cgttgagagcagaaaaccccaaatcccgcggttcccccgcgccgcaaaaatcatccatggcttctccgccgccaccggcggccgccgccgccgcgagcccgaagcggaaacccaagcccaagccgaaggcagccggcgcctccaccctaaaccctaactgggcgcagctccagtccaagctcccccgccccgtcgccgccaccaccctcggcaagcgcaagcaccgccccgaccacccttctccggcccccgcgcccaccgagcccgccgcggaggaggaggcggcggaggtcaagctcgtgcccacctccgacgacaccaggtgagccatcagagcaaacgccgcgcgaggaggcatcttcttgtctttgtattgtgctgccgcttttgagatgctttgggttttgattttgattgctgtggggatggccggatggatggggaatggttttggcagcttgacgaaggcggtcgctgtggattgcgagatggtcggggtcggcgcaggcggcagcaagagcgccctcggcagagtcaccttggtaataagcaccgtcctcccaaatctcaattccatacatccttttgtattctgtgcgcacagcaatgatgaatgagctaaatatcatagtatatattaatcagctcagtatagttcgggagtcaaggatatgcgcgagcattagtttcggagtttgttgttacgatttgatgaaaatggtgaggaggcgacataagctgtttaatcttgaaagaaggtagtatcgtgatttgtgttttgctggcaatgagattgcaactgttttgagtacagagtttgatttggattatattctagttggactattcacaataggaggatgggtaatgacaaaatgttgggcttagctagtatgtattggtattaactttggaactcagatggatcatttacttgattggaatttatggccttatttggttgcaaggaatatatagtaagaaacatgaatttctcaccagtagccagttcaatttttattttcactaagtagtgactagtttgtttggcaatattgtcacctagtctttgtgctgtgctatggaaatggttcccatgcattggctgagattttaagggttatgcttgaaattcatgatttgtaatattacagtcaaatgggcatggcatgattaattgtaccatataagtattctgctgatttgtgtacccattttcgttatctttatcaaagaacaaagaagctggagttaaactatgagacccactattaaactgtaataccagctatgtggtaatgctaacaatgcgtcgaggagaggttatgtttgtatcattttattatgcactctactctctaggaaggaaggaagcaactaaggaagtcccatactcttattttcttttactgatggggagcaatgggcatgatgtagttcttgagaaggaacaaaaaccaatgtatagttacttcctgctttgctttcgtaatttgaatgtacatatatgttatttcttagtatgttgagtgttggattgatttcactggttgaagcatcaaaggatttcatggaatctgtaaattgctgtggacttaaggttgatttagaaagctgaagagaattctagcctctttatgaagaagtttagttataataaatacccttcttttgaatatcacccattaatcttattgtgctttttactaggttaactcttggggtaacgttgtatatgatgaatatacaagaccggtagagcggattgttgactaccgtacccatattagtgggattagaccgaagcacatgaataaaggtaaacatcactaaactggcactgcatgattttatttctttagaggatggcaacctatatgggttatgcaacaatgttgtacaacactgcagccaaagatttctgggttgttcagaaagatgtagctgagctgatcaaaggaagaattcttgttgggcatgccttgcaccatgatcttaaggttgtcaatgaccataatttaattatttatgcactttgtgttcttgtgtaacacggtaaacattttccaggttttgctactaggccacccaaagaaggacataagggatacctcagaatatgaggtttttcgaaggttagatgatcttgacatatatattttctatattatgtgctcttgttaagattgctcaacattgtattgacatgtgctcctgttatattagggaagggaagaggagatcactgaaagatcttactgctcaagtacttggtgctaaaatacaacagaaagagcattgcccagtaagttatacataatatttttctctttatgcaatgtagatttgtttattcattttaaaatgtacttctgattactcttgaattactgctagtaatctttcacatggttaatcacttgtacagcgaaaacttgtaatcatttgactaaactttcttgtcaatatcatttatgcttgtactaaatactaattttcgtggccattttgatactcttatagattgaggatgctcgtgcagcaatgttcatttacaacaagcataagaaagtatgggagaagaatatgaaagaacaattcagatttagaaagaagctcaagaagcgaggcaagaagaaatctgctgaaggcagtgggaatgatcctaatgttcccacggttcttctatagaggatggatttaggaagctagtgtgatgcattgccctacctgacatgaatttgaagatgccaaaggctatttgtgtgagattctcatggaacttaaatgaggcagtatgctgacccaagatgtggtgcagctcaatcatgatgaacatcaacacatttctcgatgacagtgtcacgattccatggatttatcacatttcatgtagtagcatttgttttagggaagcaatatttctgatgaaaattttgtacctgaatctcatattctcatgtaatgttactccatacaaacctccaagctttgcagcaaacatatctattaatttattgaaaaagttacaggagacaagaccgggttactgagaatcggattctgagggctggggtgccttgtaaccactgtagatgccagagctctctgatcatgccgttttctaattgtgaactgatggttgtgcaatggcagggaattgctgtccagcaggtgcaggatgaacaccatcaacaccgagcaggtgaacattggtattggcccgaagatccacatcagcagcgttgtcgcgaagtagagtgcacggagccccattgaccagaagttgcctcctcggatcacagcatgctggatgtagcttgccgggacatcagaatccagcgtggttattaggaagctggcttggacatagtacctgcatctccagaggaaacaggtctgaaaatttctgattttgatgccatgttatgttacctcagcagggttggaataccggtagtatctccagaattagtggctccaaaaattcaactttaaagattcaaatgcaaaaggttgtatttttttactggtaaccactagaaatttttctaaattcaagtttcaaaatttaaatttgaatatccttctttcaggtatttacagaggctggtttcagaggtgagcagcagctgaagcctgaagggaagctaaccttgcagagtggatgaagcaagtgaaggagacgaggaagcagacgagaagggagatgtacttcacggtggccgtcgcctgggtgcggtcgccgtagacgagctccgtcatgaaaaccttggaggtgctgctcacccaggccccgatgagcgagcccagcgcgatgcacagcgacgccaggttcgtcgacgccgagatgttgctggagatgacgctcagtgccagccccgtctcgtccgggctcgcctgcaacgacagcaacacggtaaatcaccaacctcccatcaccacggccacacttggattcagctgttcagttgtcacagaaaattcagttgctccatgtcgccggcggccggcggtgggtggtttacctgcaccatgcggcggacccatgccagcttgttgtggttctcgtagccgatgacggtggcggcggggcggcggagaatccggtagaggaggatgaggtggtagccgaacatgatcaccagaccacatggcacaagcaccaggtccagggagctcttctgcatcatcatcaccaccatcttctcttgccctcctccggttagacctgtgttcttcttcccttctttcttattatcaatcacctacctctctctgtctctctggctctgcattattctctctctaagctcacatagccatgatgctattatcttatttgtgttcttgagaatgtgatctgatcgtggcgcatgcatgattgcgttttaatccgggtttatttgtgtgtgggtgtgctagtggcagagtggtggagctgggttgcttatggattaatggataggatcagtacgtggtaccaacggtacattctggcttggcttgtcgcttgggatcaaagacttgggaggagggtcaggcaagcaaaattcatggagcttgcttccaagaaatccaggcaattgttgcttcccgggttactgtatctcctaaccttccaagatccgaaacccaacttgcataaagctacatgtcaaaatcaataatttatgatttaaatataatataaataaatttctatggtagtggttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0377400, RefSeq:Os08g0377400