Os08g0397900

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Revision as of 12:59, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0397900| Description = Conserved hypothetical protein| Version = NM_001068276.1 GI:115476289 GeneID:4345496| Length = 4294 bp| Definition ...")
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Gene Name

Os08g0397900

Description

Conserved hypothetical protein

Version

NM_001068276.1 GI:115476289 GeneID:4345496

Length

4294 bp

Definition

Oryza sativa Japonica Group Os08g0397900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19044809..19049102

Sequence Coding Region

19044989..19045156,19046730..19046810,19047009..19047336,19048502..19048557

Expression

GEO Profiles:Os08g0397900

Genome Context

<gbrowseImage1> name=NC_008401:19044809..19049102 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:19044809..19049102 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggaggaagcggaaggcggaggcggcgcgggcggcggaggaggaggccgaccgggcgctctacggcgccttccgcggcgccgccaactcgctctcgcagctctacgcgctcgccggtgcccaccagcgcctctccttccacgccggtgagcgccacgccttggaaaaactctaccagtggatggtgcgacagcatgaaattggcttgaggctcacagtatctgacatagcatcccacatccagcacgagattgagtatggaggtgacaatgcattaacttcaccgagatcgcaacacgcattccagaatctccaagctccaatgcacatccccaacacaagcacgcagcagccgccatcttgttcaatcacaccatcaaacccttccaaggactctatgatattttcgaaagcgctatccagccctgtccggcaaaacctgcaactgtaccatgtacagcaatgcggtgacacaggatgctttgcagatggcattttttgccctggaaacggtgactcggatcctgcagcatcaaatgattcgtcggtggatatgcattcagatagcccagggtttccacggcccactgaggccctacgagacagcgaagggggccgacccagctga</cdnaseq>

Protein Sequence

<aaseq>MAGRKRKAEAARAAEEEADRALYGAFRGAANSLSQLYALAGAHQ RLSFHAGERHALEKLYQWMVRQHEIGLRLTVSDIASHIQHEIEYGGDNALTSPRSQHA FQNLQAPMHIPNTSTQQPPSCSITPSNPSKDSMIFSKALSSPVRQNLQLYHVQQCGDT GCFADGIFCPGNGDSDPAASNDSSVDMHSDSPGFPRPTEALRDSEGGRPS</aaseq>

Gene Sequence

<dnaseqindica>181..348#1922..2002#2201..2528#3694..3749#ctctgagagagtgggccccacgcggcagcgacgcacgcatgataggctcgtagccctcgccgtcgtcgtcttcctcctcctcctcctcgcgccgcggagaggattccatcctcctccctctccccgccgccgccgtcaatcccgaatcccgagggctcgggtggtcgtcgtcggtccgggatggcggggaggaagcggaaggcggaggcggcgcgggcggcggaggaggaggccgaccgggcgctctacggcgccttccgcggcgccgccaactcgctctcgcagctctacgcgctcgccggtgcccaccagcgcctctccttccacgccggtgagcgccacgccttggtacgccccgagctaaaatcgccccctccccaagtcccaccctttccagtcgggtgaacttctggtcagttttgcaatcgagagattagattatttgtttttttggccccttttcctcgatttctttcagttcttggatcttaagatttttggtgttgcggtgcgggtgggacgctgaacattttgagtcgtggggcttctttcttcagaatttttgttttcgctacttacattttgtggagaattgaactctcgattttcacctttttgctaggttctgtgcatataaagctgcaatatttgctatattctgtcttcagctgtggtgaaattgtgcggagattttttattttggtgttcactgctattcatgtttggttttagttgccacttatgagttatgacaacaattgtttcttgatgcaaattttgctcagttaattcacacttttaatttgtgtgggcgtcatcacaccatctgaaattgcagtttatcgctacttcatgatgactgaaacctaaatgcatctttgttttcatcattggtattctcgtttaattgcagaaatcgtggtttgttgtgaatttgtttaccatcagttagtcaaacttaggtggaaatgtttcaattctgtattccaagacacaagttagattgtgctcttgtcgttcaaaaaaaagaaagaagttagattgtgctaatagtaataaagagataaaaaaagggattggcgtacagaacataatagagaaacgtatgggacaggtttccttctacactatttctaaaggatctttgacaagtttccttttgcttgtttggtgttcacaattaaaaagtagtactgttaggtgtaggtatgcttttctaatcttaaaaggcatgtttttttttctcatcttaaagcattgcaataagcaaattctaggttggaagattagccaaaattatcccccctgtgatagattttagctataattgttttggtgctgtaagacagcttgctgggagtgctctttaagttttacaagtttgccttcatcaacttgtgctaaactagtccacctgtactacatgttctgttattgtgcattagttcattttggttgtggttcaatcttctcctataagttttgaatgacttagaagaggcaataccaccgaaactaccattgcctactgaaacaccaattgagatttaaaatctgatggactttttggttcaccaacaggctgcagtaattcatgggaggacacagtgatattgtgtaatgaatttggcatacttgaatgcgttgttccttacaaaaagcttaagtgatggtggcacagtaccaaatacataattgatttagtcatctggtcccccatttgtgttaatatggtatagatagacaagtattttagttgtttaaatcaatcctcagggattgtgtccatacaacaggacaataattggtgctatgatgcacaaacccaattgcatatactggtgcttagcatttttcgtgctcttgtttagattgatagattatgcttggtaataatgtgcagccattttgttttattcaggaaaaactctaccagtggatggtgcgacagcatgaaattggcttgaggctcacagtatctgacatagcatcccacatccaggtccagatttctatttgtagactaatcacactcttattgtactacatatagttcactttcacatctatgatctgttcactgaacctctcagctaggctgtagtattatgaacgatgatatttcatcacatttcattaatagctcctgtccttactccttacccatgtagccatgtttatgggtttttcttgaatgtagcacgagattgagtatggaggtgacaatgcattaacttcaccgagatcgcaacacgcattccagaatctccaagctccaatgcacatccccaacacaagcacgcagcagccgccatcttgttcaatcacaccatcaaacccttccaaggactctatgatattttcgaaagcgctatccagccctgtccggcaaaacctgcaactgtaccatgtacagcaatgcggtgacacaggatgctttgcagatggcattttttgccctggaaacggtgactcggatcctgcagcatcaaatgattcgtcggtggatatgcattcagatagcccaggtcatgactcatgagccctgattcctgaatgagcaattaccattttccagtttgattccatgaactgcaatcaacaaacttgaagtaaagaagtggaattgccctcacgcaatctgggatctcaatttaatccctcacccaagttaacttgtaatttgtaactagctattgcccagttacctcagatataacgtgcacatatatatcatccatgtatgtactttcagattatataatagctgacgtatcagttttttatggtactaaacagtgaacactgatcagtaatttcagattgcaaaactttaagctagcttatatagctgtttcttcggttaagtgtcgcaaatgttaatcgtatataatttctttggggtaaatatgtgatgaaaactcaatttaagtgaaaactcgtgcaaacaccaatcaaaaagttgtctaaatttttttaaaaaaaatcacaaatgtagatatgatgatattttgtaaccaagtaaaaaaatcctgttcaaatttgattttgtttgtaagaaataaaaatatataattccaaaaaatataaaattgttatttttatatctcacaaacaaagtaaaagcaatatagaaattcagaatacttttagtaagtgttatttgtgtactcaatttggcagaagctatatatatcgtggccgtgggaaccagaaaccgtacgatccctatggtatgatatgtataaacaacaggaacaatgcactaatgcatctaatgagcacattatttatatttctaaaacaataagattgataattatatacttcacccatgaacaaaaaaaataaattatgagcgacaaaacaaggaccccagacatcctaccgtcctgaatgcaacaaattaaatcactgtaaaaattcctgtcattcttgcatctgtaatcgtcaagctctttgtcagccaccaaatggaagatgtaagcatgttgtatctatcatcaagcacttcctttaccacaaaacagaaaaaatacactgttctagtacaaacatatctatagttgcattacacctagagataatttacatgaagacaaatctaaattcatccactctcagaatattcttctttctttggcactcatcttgctgctgtgacctcattcggatcaatgatgtacccaacagggtttccacggcccactgaggccctacgagacagcgaagggggccgacccagctgaacattggctgggacagggatttcatcagagtgaccagaaatgcagagtgatccattgtcatcttgatcccagtaaacttcaaccatcacgcctcttgggtgatcctccgactcggttccgggaattccgacaaaacgagccccctttggtatctgcattgccatagaaaatggaagtgatatcaaagagatattcagagttttctgaagaaatcacacaatcaaattacagcatagcagcaagtttcagagttttctgtactgttgctgctgtacagaagttctctacatagcagtgagattatccttttcatgtccaatattgcagcattgttcttaggggtactaaggaacaaacctgaatagatgaacctgatgataggttcagagtaaccagggtgccttcagcagtagagctctccagttctgcctgctttgcgatgttcaggaatacttcttcgagcgtcgtgaggccgagttgaatgtctgagataccgaattcccgttccctgtcttggagttccccaaagaacctctgcttaatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0397900, RefSeq:Os08g0397900