Os08g0399500

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Revision as of 13:00, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0399500| Description = SRA-YDG domain containing protein| Version = NM_001068283.1 GI:115476303 GeneID:4345503| Length = 2413 bp| Definiti...")
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Gene Name

Os08g0399500

Description

SRA-YDG domain containing protein

Version

NM_001068283.1 GI:115476303 GeneID:4345503

Length

2413 bp

Definition

Oryza sativa Japonica Group Os08g0399500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19139440..19141852

Sequence Coding Region

19139440..19139611,19139711..19140294,19140332..19141306,19141466..19141852

Expression

GEO Profiles:Os08g0399500

Genome Context

<gbrowseImage1> name=NC_008401:19139440..19141852 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:19139440..19141852 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgggggcgaggtggggaggaggggacgtggaagagtcatggtggagggggacgaggtgcggagcgcgcgggcgcggtggtggcgccgccgagggcagcggacgcggcggggacggggacggggacggggaggaacgcggtggccgtcaacggtggtgcggcggaggatgtggtggtgattgcatcagggcggcgatcggtgggcgagccgacgctggacgtctcggagatgctgctccaggcggcggagacatggagaagccggcgcacgcagcgcgaagcccgcccggacgcgcttccacctcgtcccgtcgccgcggatgggcgaggcggctcaggcgaggggaccagtagagcgcgggggcgcggcgaggaggggatgactcaagtggccgtggccggtggtttggccacgctcacgcacggcggcgagcgggatcctggcgcggcggtggcgacggaggagaagagaaatggcggcgaggtggggacgaagaaggggttggaggagcgggccgcgcgttcgccgccgccgctgccgccgcccaagcggagggcggtgtcggccgttcgccagtttcctccaggttgcggaagggacgccgctgttccactcgggcgccgccacggccgcggccgcaatgccgacggtggtgttcgtccgttggatcaggcgactgctcctcctctcgctggcagcaaaactgatttgccgttggaagctgtggtggatggtggtgatccaattgcaaatgtcgctcacaaacttggttcactgaaaaacggtgtacaagaaggggcagcaaatagtggtgaattgctggggaggaagcaagtgatggctcaagccgcgaatgtgcttccaaagaggaggatggtacccgtgacgcgctgcttccctcctggatgtgggagggacgttaagactggttcaggtttggaattcatggctgttgatgcttcttgtggtggtgtgtcaaaggaggtggtggcttcggatggcggtgatagtttggttagccaggaattggaggagggtgaggtggctgaggaggcatactctgatgtagattcacaaaatgttgctgtggatgattccatggctgcagctactgaagatgttaaggtgatgaacaaatgcaaagggaccttacccagagccgctgctgaaccttgtgctgagggtccttccaaagaacattttaagggtacgagggagtgtgaaaatgataggatgggaaaatcatccatgaatgttgcaacagaagtatttggtgattgtatgatgagaagtaagataccattgatagctagaaaagcagtcaagtcaccactgaacattctgcatagacgtcccttctctaagggaaaagaggagtgtgttgtaacaaatagtgctccatgtggtcctaagaagaagttgaaggtaaaaggtgcatatcaaactaaagatattcctatcaagattgtctctacacctggattagggggcaaggacaaccttgtcgacaaagaggctttgatcttggaagatgatgatattttgaaggcactagctgttcatgatggaacacttaagttgtatctcaatgcttcctcatctgtgcagcatcacgggcaacatggaagtgggaatgctgatgataggaggaaaaccatgatgctgtgcaggaggtttcagtttatacgccaggctcttgtacaagctgtcaaacagggctcgttgaagggaggaatcgataccgccgatcataatggagtgcttgttgctataagcatcgttgcttctggaggttatcctgatagattgtcaagttcaggtgaactaatatacactggttctggaggacagcctactggtaagaagaaaagtgaggatcaaaagctagagaggggaaatcttgccttgaagaattgcatcaagacaaagacacctgtccgagtgatccatggattcaaaggtcaaaatggcaaggatgacagttattcaagggctaaacaaatctcagcatttacttatgacgggttgtatcatgtggtggattactggagagaaggtctaaaaggttctatggtcttcaaatacagactacaaagaattcatgcttatagatga</cdnaseq>

Protein Sequence

<aaseq>MRGRGGEEGTWKSHGGGGRGAERAGAVVAPPRAADAAGTGTGTG RNAVAVNGGAAEDVVVIASGRRSVGEPTLDVSEMLLQAAETWRSRRTQREARPDALPP RPVAADGRGGSGEGTSRARGRGEEGMTQVAVAGGLATLTHGGERDPGAAVATEEKRNG GEVGTKKGLEERAARSPPPLPPPKRRAVSAVRQFPPGCGRDAAVPLGRRHGRGRNADG GVRPLDQATAPPLAGSKTDLPLEAVVDGGDPIANVAHKLGSLKNGVQEGAANSGELLG RKQVMAQAANVLPKRRMVPVTRCFPPGCGRDVKTGSGLEFMAVDASCGGVSKEVVASD GGDSLVSQELEEGEVAEEAYSDVDSQNVAVDDSMAAATEDVKVMNKCKGTLPRAAAEP CAEGPSKEHFKGTRECENDRMGKSSMNVATEVFGDCMMRSKIPLIARKAVKSPLNILH RRPFSKGKEECVVTNSAPCGPKKKLKVKGAYQTKDIPIKIVSTPGLGGKDNLVDKEAL ILEDDDILKALAVHDGTLKLYLNASSSVQHHGQHGSGNADDRRKTMMLCRRFQFIRQA LVQAVKQGSLKGGIDTADHNGVLVAISIVASGGYPDRLSSSGELIYTGSGGQPTGKKK SEDQKLERGNLALKNCIKTKTPVRVIHGFKGQNGKDDSYSRAKQISAFTYDGLYHVVD YWREGLKGSMVFKYRLQRIHAYR</aaseq>

Gene Sequence

<dnaseqindica>1..172#272..855#893..1867#2027..2413#atgcgggggcgaggtggggaggaggggacgtggaagagtcatggtggagggggacgaggtgcggagcgcgcgggcgcggtggtggcgccgccgagggcagcggacgcggcggggacggggacggggacggggaggaacgcggtggccgtcaacggtggtgcggcggaggatggtaggaggacgcctctgtttctgttcgtcacctcctctgcttgggtttcgtcgaatgcctgggatgcgtgactgttaatttggtcctctttgtgttcagtggtggtgattgcatcagggcggcgatcggtgggcgagccgacgctggacgtctcggagatgctgctccaggcggcggagacatggagaagccggcgcacgcagcgcgaagcccgcccggacgcgcttccacctcgtcccgtcgccgcggatgggcgaggcggctcaggcgaggggaccagtagagcgcgggggcgcggcgaggaggggatgactcaagtggccgtggccggtggtttggccacgctcacgcacggcggcgagcgggatcctggcgcggcggtggcgacggaggagaagagaaatggcggcgaggtggggacgaagaaggggttggaggagcgggccgcgcgttcgccgccgccgctgccgccgcccaagcggagggcggtgtcggccgttcgccagtttcctccaggttgcggaagggacgccgctgttccactcgggcgccgccacggccgcggccgcaatgccgacggtggtgttcgtccgttggatcaggcgactgctcctcctctcgctggcagcaaaactgatttgccgttggaagctgtggtggatggtggtgatccaattgcaaatgtgcatcaaatcttcacatgcttcggatgagaatcaggtcgctcacaaacttggttcactgaaaaacggtgtacaagaaggggcagcaaatagtggtgaattgctggggaggaagcaagtgatggctcaagccgcgaatgtgcttccaaagaggaggatggtacccgtgacgcgctgcttccctcctggatgtgggagggacgttaagactggttcaggtttggaattcatggctgttgatgcttcttgtggtggtgtgtcaaaggaggtggtggcttcggatggcggtgatagtttggttagccaggaattggaggagggtgaggtggctgaggaggcatactctgatgtagattcacaaaatgttgctgtggatgattccatggctgcagctactgaagatgttaaggtgatgaacaaatgcaaagggaccttacccagagccgctgctgaaccttgtgctgagggtccttccaaagaacattttaagggtacgagggagtgtgaaaatgataggatgggaaaatcatccatgaatgttgcaacagaagtatttggtgattgtatgatgagaagtaagataccattgatagctagaaaagcagtcaagtcaccactgaacattctgcatagacgtcccttctctaagggaaaagaggagtgtgttgtaacaaatagtgctccatgtggtcctaagaagaagttgaaggtaaaaggtgcatatcaaactaaagatattcctatcaagattgtctctacacctggattagggggcaaggacaaccttgtcgacaaagaggctttgatcttggaagatgatgatattttgaaggcactagctgttcatgatggaacacttaagttgtatctcaatgcttcctcatctgtgcagcatcacgggcaacatggaagtgggaatgctgatgataggaggaaaaccatgatgctgtgcaggaggtttcagtttatacgccaggctcttgtacaagctgtcaaacagggctcgttgaaggttctaagagctgaccttgaagctgataaaatcgttcggaaattgccgagctttatcaaacctggacctattgtgggaaatgttcgtgttgtcgaagttggtgacgaatttctatacagagtttagctagcccttgttggtctccaccgtccataccagggaggaatcgataccgccgatcataatggagtgcttgttgctataagcatcgttgcttctggaggttatcctgatagattgtcaagttcaggtgaactaatatacactggttctggaggacagcctactggtaagaagaaaagtgaggatcaaaagctagagaggggaaatcttgccttgaagaattgcatcaagacaaagacacctgtccgagtgatccatggattcaaaggtcaaaatggcaaggatgacagttattcaagggctaaacaaatctcagcatttacttatgacgggttgtatcatgtggtggattactggagagaaggtctaaaaggttctatggtcttcaaatacagactacaaagaattcatgcttatagatga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0399500, RefSeq:Os08g0399500