Os08g0409100

From RiceWiki
Revision as of 13:00, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0409100| Description = The start codon is not identified.| Version = NM_001188642.1 GI:297726414 GeneID:9267122| Length = 3675 bp| Definit...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0409100

Description

The start codon is not identified.

Version

NM_001188642.1 GI:297726414 GeneID:9267122

Length

3675 bp

Definition

Oryza sativa Japonica Group Os08g0409100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19666785..19670459

Sequence Coding Region

19668770..19669189

Expression

GEO Profiles:Os08g0409100

Genome Context

<gbrowseImage1> name=NC_008401:19666785..19670459 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:19666785..19670459 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tggaattttttctctttttttttgttcaggcttaatctgtcgccgtcgttttcttcttccctgggcttggcactgattgttttgtgtgctcgttgtgaaacgaataataaaaataatgcagggttcgccgactgcaccaacgtgctgccggtgtacatcggcgacgaccggaccgacgaggacgcgttcaaggtgctccgcaagagaggccagggcatcggcatcctcgtgtccaagtaccccaaggacaccaacgcctcctactccctgcaggagccagccgaggtaatgaccaccccccttgcatttctttcaatttttctttctgatttctcatctcaaaactgtcaacacgtacatcacacaaaaatgttcagatttttttttagaaaaggaaactcttctactttaaataaataa</cdnaseq>

Protein Sequence

<aaseq>WNFFSFFLFRLNLSPSFSSSLGLALIVLCARCETNNKNNAGFAD CTNVLPVYIGDDRTDEDAFKVLRKRGQGIGILVSKYPKDTNASYSLQEPAEVMTTPLA FLSIFLSDFSSQNCQHVHHTKMFRFFFRKGNSSTLNK</aaseq>

Gene Sequence

<dnaseqindica>1986..2405#tccctcctctctccgccgcgaatccgacgagctcgaacgcgaaggcggggactctctctctctctctcttcgacccggatcgattgtatcgatctcgccccgtcggtcgatcgatcgatacctcgacacggagcgaccgatgacgaagcagagcgtggtggtgccggaggtggcggtgccgatgccgcccaactccgcgccgctgctcccgtacccgccgccgcgggccgcgccgggcgtcgccgtgcgcaagaagtacctccaggcgcagctcgacctcggcgcgggcctcccgctcatcaacggatgggtggagtccatgcgggcctcctcccccacccacgccaaggccgccgccgcgctcgccgccgccggcgccgtcgacgacgagcgcgccgcctggatggtccgtgcatttctttttcatcgattcttgcgtcgccggtgcatgctctgttttactgaaatgggcgctggttgtctctgatcggtgtgcaggtgaggcacccgtcggcgctgagcaagttcgagcagatcgtggcggcgtccaaggggaagaagatcgtcatgttcctcgactacgacggcacgctgtcccccatcgtcgacgacccggactccgccttcatgtccgacacggtaaccacccacgcatcgaacacttcaaccacaccgccgtccacgatcgagctcactcaatccctctctctcttctccctcagatgcggcgggcggtgcgcagcgtcgccaagcacttcccgacggcgatcgtcagcggccggtgccgcgacaaggtacacacattatccccaatgccatcccaggagatcggtgggtgcagcgctatgtgctgagttcagattcttgccgtgtccgtgcttcgtcaggtgttcgagttcgtgaagctggcggaactctactacgccggtagccatggcatggacatcaagggccccgcgaaggcctcccgccacaacaaggccaaggtgagcatcctccactgccgcacttgtcaaccacagcgaggaaaagcaaaacttatctttctctgcttttgcacctctgtgtgattctcaggcgaaaggcgttctctttcagccggctagcgagttcctccccatgatagaacaggttagaacatagtactactgctgcgacgcaattatgcaaactatagctgaaggagaagtttagctttttttcttttaatttttgggttcgatctgatgttaaacttggttaattgtggtgtgtataatttgttaggtgcacgattctctgatagaaaggaccaagtgcatacctggagccaaggtggagaacaacaagttctgtgtgtctgtccacttcagatgtgtcgatgaaaaggtgcggcacaacacaattgtttcctttccttttctttctcttccttccctgcatctactactactagcacctgttttttctttgggtgttagtgtcttaattagtgtgtgagccccatcctaaaattgtcactattcagcagtaataattattattagtactattagaaaaagaagacatcaactaatcatcagcctcttcgatctccttaatttgtttctctctgtaactagatgatcaattaaccgatttcatgcatgcagagctggagcacattggctgacatagtgaaggcagagctcaaggactaccccaaactgaagctcacgcaggggaggatggtgagttttttttttctttcaaatctcactctcttttcttttcttttttctttttttttttgtttctgcagacatgtgtagccatcaatcgattctttgctaggtagagatatatgcttattattattaagctttgatatgttgcggccgtgagacgatcactgagtcattgtcctccgatcattggatgcttctcctgtaggtgttcgagatccggcccaccatcaagtgggacaagggcaaggccctcgagttcctcctcgagtcgctaggtaatggaattttttctctttttttttgttcaggcttaatctgtcgccgtcgttttcttcttccctgggcttggcactgattgttttgtgtgctcgttgtgaaacgaataataaaaataatgcagggttcgccgactgcaccaacgtgctgccggtgtacatcggcgacgaccggaccgacgaggacgcgttcaaggtgctccgcaagagaggccagggcatcggcatcctcgtgtccaagtaccccaaggacaccaacgcctcctactccctgcaggagccagccgaggtaatgaccaccccccttgcatttctttcaatttttctttctgatttctcatctcaaaactgtcaacacgtacatcacacaaaaatgttcagatttttttttagaaaaggaaactcttctactttaaataaataaaaacgcagtcgtccttattccatcccctcctgatcacctcatgtttcttcttgggtgtgtaacaattataggatcctattttattatcaatctacccacccagccaattcacgataatatgggcttagctcgtgctttatctcaatccacacatcctgtaaatcccaaattatatggtttggcccgttgtaaatcacttccaacttttctatcgcattaaaactttttcttcaaacttccaacttttccattacattaaaacttttctacacacataaacttccaattttccatcgcatcattctaatttcattaaaactttcaattttaacgtgaactaaacgcacccgtagtaaaagagatgaaaaaggaaaggaaatactagtacactacactgttatgttctactggcgcggcgctgcgcgcgcgtagttttccggcgcgcgcgtcgcggctattattattatctttagtcgacgtcaatgcgcgcgaagctttcgttcccggggaccaccgcgcgccgcgggggacggacagccggcgccgtcggtgtcgaccggtcggtcgactcgggagggcggcgcggcccggcgtccaccaacttgtttctgcactgcaccagcaccaccgtgtgttttctactccggctaaaatttttttttctcccattttcttttctcttgcaggtgatggagttcttgctgcggctggtggagtgggagcgcctctcccgtgctcgccccaagtggtgatttcgccgacggcttcaacccacatttcccgacagctatctctctctctctctctgctactgctctgctctgctcctaggggttttgggttaggatcggagaaagattattattattattattatcatcatcaagggtattagtagtatataaatatatgtaattaaggggaggggtgattaattagagagggagcattatcttttagttattatcgtagctctcctgtacactgttctgtgtgcacacactgacagtgcgcgcgcgcgcgtcctctggtttttttgggaggcgctttgtgttgggtggtggtggctatgagaaggggatgaagagtgttgctgtgtttgggccttgtgctctctcgtcctttttggctatggtggttgctatgctacctgggtgggtgcacaggaaggtggatggatttgagtgctaccgtgtaattgtatatggcttctgattatctatgtacaagaatatatatgatgaaatgaagagcatcagaatattacagc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0409100, RefSeq:Os08g0409100