Os08g0419000

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Revision as of 13:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0419000| Description = Conserved hypothetical protein| Version = NM_001188651.1 GI:297726432 GeneID:9267039| Length = 5483 bp| Definition ...")
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Gene Name

Os08g0419000

Description

Conserved hypothetical protein

Version

NM_001188651.1 GI:297726432 GeneID:9267039

Length

5483 bp

Definition

Oryza sativa Japonica Group Os08g0419000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:20120127..20125609

Sequence Coding Region

20120187..20120438,20120545..20120922

Expression

GEO Profiles:Os08g0419000

Genome Context

<gbrowseImage1> name=NC_008401:20120127..20125609 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:20120127..20125609 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcgtctccccgcggccgcctcctcgccttcgcgcccacgctccacctcctcctccgcgcgctctgggtagccggcgtcctcaacatcgccaaggacgtcgtgcactgcgcccgcctgcagagcaccacctccgtcctggacgaccaccgctgcaacctctccctctcgttcgcgctcgccatgctcttcatctcgctgctcggccggagcatcctccgccgcagcgacgccaaggcggaggcggagcttggaggaggtgaagaagacggcgacgatgtgctccccgagaaggcgtcttcttccccggagacgcatccccgtgctcactggatgctccaggggtggtcgccgcgtgatgtggaggtcggattcgtgatggggctcgccttcctcccctacctctggatcaccatgctcgtctcgctcttcctgctggtgccgcggctgcatccgcccccacctgctgaaaggggggttcctgtggtggagctgctcggtgacctcatggtccatgtcgggtgcctctgcgtctccatcaacctgtgcagccttggcgtcccgtacgccatgctcaggctgacgaaggcgctcgacgccaaggatggagacgcatggatactctaa</cdnaseq>

Protein Sequence

<aaseq>MEASPRGRLLAFAPTLHLLLRALWVAGVLNIAKDVVHCARLQST TSVLDDHRCNLSLSFALAMLFISLLGRSILRRSDAKAEAELGGGEEDGDDVLPEKASS SPETHPRAHWMLQGWSPRDVEVGFVMGLAFLPYLWITMLVSLFLLVPRLHPPPPAERG VPVVELLGDLMVHVGCLCVSINLCSLGVPYAMLRLTKALDAKDGDAWIL</aaseq>

Gene Sequence

<dnaseqindica>61..312#419..796#tcctccattgcgttgcgctgcgcccacgccgccgccgccgccagagcgtggaggtaagccatggaggcgtctccccgcggccgcctcctcgccttcgcgcccacgctccacctcctcctccgcgcgctctgggtagccggcgtcctcaacatcgccaaggacgtcgtgcactgcgcccgcctgcagagcaccacctccgtcctggacgaccaccgctgcaacctctccctctcgttcgcgctcgccatgctcttcatctcgctgctcggccggagcatcctccgccgcagcgacgccaaggcggaggcggaggtaggtatacatgatacatcgcctcgcgccctgctcgatctgtttattctggttacttctgatatttcaatttgggggtgaactctgcatcttttgccatctctagcttggaggaggtgaagaagacggcgacgatgtgctccccgagaaggcgtcttcttccccggagacgcatccccgtgctcactggatgctccaggggtggtcgccgcgtgatgtggaggtcggattcgtgatggggctcgccttcctcccctacctctggatcaccatgctcgtctcgctcttcctgctggtgccgcggctgcatccgcccccacctgctgaaaggggggttcctgtggtggagctgctcggtgacctcatggtccatgtcgggtgcctctgcgtctccatcaacctgtgcagccttggcgtcccgtacgccatgctcaggctgacgaaggcgctcgacgccaaggatggagacgcatggatactctaattgggtaattcacttccacattatatatgtttctaattggtttgaattggtgaagaatgatgagttagcaaattaagcgattagattttcgattcgacaggctaggaatgcgattgtgaaaactttgaaattcgccggtccgatcgatgtacgtagcatctgtttggcttcggtgcttagtttatgggagtcatatgtctaaagttatttcagtcaattattattatgttcctgaaatatcgtcacattctttttactttcttcttgtctctagccatttgctctactgtgataccgtactcttcattacttttccttcaatttacaggacttctcagtactgtttaacatcaggtttttgcctctacggttaatgctaacttctccatgtaggaaatagtatgacatcaactttgcttggtttgcaacaagtaaagatactttgataaaaggatcatcacagtaatgctagttctcaactatattccacaaataatcataacccatgctgtcacagtgatcttgataaaatagcacgttggcacaatcagtgaggttgagtacgggtctgtttagtttgcgaaaagaaaatttttggatgtcacatcggacgtttgaccggatgtcggaaggagttttgaacacgaatgaaaaaactattttcataacttgtctggaaaccgcgagacgaacttattaagcctagttaatccatcattagcacatatgggttactgtagtacttatagctaatcatggactaattaggctcaaaagattcgtctcgcgatttccatgcaaactgttaaattagtttttttatctatatttaatacttcatgcatgtgtctagagactcgatgtgatgtttttggaaaaaaaaaaaagaaactaaacaaggcctacattgaggtgcgcgaattgttattgaaaactgttaggatacttgtttggcaaggacatttctgcagcattttctcgacagtaccccattaacttaaagaatgagacaactgctccttcaacattttcccccctcactcactgtgtcacttaggttgtactccctccatattttaatgtatgacgccattgacttttcgatcaacgtttgaccattcattttattcaaaatttttgtgcaaatatgaaaatatttatgtcatgcttaaataacattcgatgacgaatcaagtcgtaataaaataaatgataattacataaatttttttgaataagacgaatggtcaaacgttggacaaaaagtcaacggtgtcatacattaaaatattgaggtagtactgtttatgacatatacacttccacaatgaactcaaagaacattgtcctgatggaaacttgggtgtttggatgtaattcacacgagagtcaaccatctctcgaattggtgtttaggctatggtgctaataaattatatgtccattggatgaaaaaacgtcctaaggaggcaagatgaatgttttggtacatgcttgttcaattgatcattattggtattctttcttcagaactccttttaatgaaaacttttgtcaatcaaaaagtatggtacttaactgtcaagggaaactctgtaaaaattataacttattttacttgacatgttatatcccttgtttccccttatcctgatacataacttctaagatccttatcgatgcggctcaaggtctgtaacctttgcatgaattgtaacctactaaccttacaatactcgagattgtttccagagtttactgaatgctgaccattaattaaaggatgacaacaaattactcagatggaaaatatcctgctaagaatattaattgctaatctttgatcaaatcatatagaaatgaaacctatatatattggttggcaatacacagacacgatgattaatttggccatcgcaagttggttttaaacagagccaccttttgaaaccttgacaatgcaatcgatcttgtgaaactaaactaagcagtgcgcccttagttcttaattacctttttttcctttgagactgacaagctatttttaagagcgttactgaagaaaactcctttagattgtgacatagaaccatttttttttgtaattactggtagtaaatatgtgattgcaaattgcaatatgtttttgtatcacttcctttgctattgcataaaactattggcccatacacccaacttggtgttggtatcactgttattttttcttgcctttttacccctaaaaaactttgcattggatacaccagcagccaattgtgcattacaggttccccttcttacagagtaatcatatgtttgtatgaactgctagagtttttaattctttgtatgcatattgatttgccttcaaagagcaaatagttttaggacatcggacatcaaactatataccacgtcttgaagcaagtatagtcgcgttcaactactatgtcttgttcttagtgtacatattacagataagatgtgaatattttcatacagtaactgttggcagctttttttttagtttctgcaacgtgttggcgaaatgagtttttttgctgctgagtaattaagacgatggttatgcaatagggggtttgtttggctgctgagtatgaagatgattatgggacaactgtcgctaaatgcgattacttatgttttagcacaaacaatgtgattgatgtaatgcggcatcggttgttgcttcgtctcacttttgatgaggcctattctggatgtacgggaatctatttatgcttagctttggccttgccattgttaaactttattgcatgcgaatcttattgccccatccttttgataatacttatgtttgtaaactaaaattcgaattttagaatttaattttggagttgattttatgttttttaccatgatttattttacactatgtgcttatgaaccggtaaggatatgtatataaaagttttactcgtaaatatattttttaatttgcaaataaaccatatagataagtataagcaaaacgatggacctgtgaaatgtcctcttttactttctcttattaaactcggatattgaacacatccaacaaagtattctaatattaattggagcatttgtattcgctatttaatgatgggcttacttttgatgttaaaatgctacatcgaggcgcctaaaaatcaggcgcctgatttttgggcatttcttcaccaagtagatcgaaaatgttttactaaataaattgaaaatgtttcaatcttttaaaaagctgaaacacaaccaaatcacctcataaaacattttgctacaacgtatgaaacaacggtttccacaaaatcgggcgtgttttcaccctatataaacaatgtttcagtaaatagcgaaagaatgtttcaattcttaagaaaagtgaaacacggtcagatcactagatgaaataatttggttcaacgtatgcaacaaacaatcattgcaacacttaaaccccgtgcacatcaacaaaccacgtgtccatcgagatgaaattattaaaacagtataaaaatccactgcaacatttagtacatacatagtgaaacatcacgagtatactagctgaaatattgttttttttatctcaactgaaacattgttggtggaacaaaacatgaaacggatcaccctaataaggcattttcgtaatatgcaggtgatttgttacaacagcgcgtggtgggggtggtgcgggaggcgtgggcgcctgattttttttctctccccattgggtgcccgatggggaagattttccatgctacacatacgtttttttggtacgatcttgttacgataagacgtaacggcacagacagcaggggaacctaacatgagtgcatgacgcacgcgtaagcggcagtccaagcgtgctcatgtgccctaaagcccaattcacctctaactttacgttcactactctaaaccctaaacatgacattccctattccatctttcatgttctgatctaatctgcaagtctgaaactaatccaatagcatgcgccatcgaagacaaaggtatgccatcttatttacttgatttcctttagcttcacaatcatcttttctggtacattaatctctctctctctctctctctctttcttttttgttcctgggcaatgttcatggccatgaaatgctttctttattattatggatttaatctgaaattttccattgcaaaacatatgccattatttttaatttaatctgaaactatggttgacactatcactgtccaaggtgcaaggaacatatttgtatgcgtaatttgcttaacctgccacatgataaattcaatgtttagtgctaagtacaattactatacacagtaagatattaggaagaagattgagattgcttaagatatgattgaaaagaagattgctttggttgggtgtgcaagcaagccaacgagatagcaggtcaggacgtcaggagcttgggctatggatatgggatcagcagtgaaggagggatccgtttgatcgtacaaccatcgtacgtatagcagcgctgtttgattaattgaacaaagattacatatacatgtgatgtgaatgctgattgctgaatgggattgtgttgcttgttgcttgcaacaggaaatcaacatttcctgcatttataaatatcgtgctgcattgtcttgcccgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0419000, RefSeq:Os08g0419000