Os08g0427300

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Revision as of 13:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0427300| Description = Conserved hypothetical protein| Version = NM_001068377.1 GI:115476491 GeneID:4345617| Length = 4723 bp| Definition ...")
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Gene Name

Os08g0427300

Description

Conserved hypothetical protein

Version

NM_001068377.1 GI:115476491 GeneID:4345617

Length

4723 bp

Definition

Oryza sativa Japonica Group Os08g0427300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:20641137..20645859

Sequence Coding Region

20641319..20641497,20642171..20642264,20642688..20642871,20642969..20643078,20643575..20643670
,20643772..20643926,20643990..20644233,20644406..20644561,20644847..20645076
,20645495..20645525

Expression

GEO Profiles:Os08g0427300

Genome Context

<gbrowseImage1> name=NC_008401:20641137..20645859 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:20641137..20645859 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggctctcgtcggcggcggcgggggaggggccgcagctgtgcgtgttcgacctgaggcgggggcagcaggaggggcaggagctcgacaagatcctcttcttccaccccaccgactgccccatcctcctccagctctccgtcatcggcctctgcgaggggatcatcaccttcgctagaatattttctcctgatgatgattgtgaggtgatagaatcagagaaacactcccatgttttttaccaagctgaagcagatatatggatggttctggtagtggagaaaaacaaggacattgagtcaacttggcggtgtggtgcattgcaaggaattcttaaagaggttcactcgcttttcacaatgttccacggaccaattcgaactttacttgacaggcaacccagtgcagaacttgcccgtggtcaccttcgcacatttttcacagattatttaagtgattttaatgctggtaaaaagatacaattgccaaccttccgtgattgcctaaaggagcgaggaactgtccaaatgctaacaatctcacgagaagtggcacttgaagttcagtcactcaccacagttcttgggtcatgtcttggaaatgtcatgtgccaatcacttgtattatttgaagatctcttggtgtccacaacacttccaccggatgatacactaaacctatatacttatgctatcttgaggttaactcctcgtgctttattgtccaatgcaacttcctggtcctatctgcggaaaggaacttcggttcatgctggccccacttctagttcatcaaatggaacagcttcagtagaaaggcctctccagcgtgagaaactatacaaaggaaaggatggttttgttgccgctggttccactacttcagaagttcgtggtgctgtggcttgggttcccatactgtggttccagcaggcagaagaccgcatgcatctctgtgtttatcagcacaagaacataaccattctgctactgattccagcttcatctctaataaatggagatgatggcattgctcatgtgaagagacatcttcttgaaaatgcatcacagaacattgtgactctggagctgaaattatcacgaggatggggaggagaaaatgcttatcatgttggtggatatcgctacttacttgttgatccagatagaaaagtatcaagagcctccccacctgggaaagtcaccaccctctcaaaggattctctactttccttgaatagactaagagaagaaatagatttggagaagtcaagggccaagaggtctgactcttgtcatgacaaggattttgaagtatgcatcagagccaaaaataatgcatgggtcattgctaaagttacccgaggaagagaactttatatggcgttagagaaggctggtgaaacacttctttatgcatctactgccatcgagaagtttagcaacaggtactgtgaaggagcattctctacagactag</cdnaseq>

Protein Sequence

<aaseq>MGLSSAAAGEGPQLCVFDLRRGQQEGQELDKILFFHPTDCPILL QLSVIGLCEGIITFARIFSPDDDCEVIESEKHSHVFYQAEADIWMVLVVEKNKDIEST WRCGALQGILKEVHSLFTMFHGPIRTLLDRQPSAELARGHLRTFFTDYLSDFNAGKKI QLPTFRDCLKERGTVQMLTISREVALEVQSLTTVLGSCLGNVMCQSLVLFEDLLVSTT LPPDDTLNLYTYAILRLTPRALLSNATSWSYLRKGTSVHAGPTSSSSNGTASVERPLQ REKLYKGKDGFVAAGSTTSEVRGAVAWVPILWFQQAEDRMHLCVYQHKNITILLLIPA SSLINGDDGIAHVKRHLLENASQNIVTLELKLSRGWGGENAYHVGGYRYLLVDPDRKV SRASPPGKVTTLSKDSLLSLNRLREEIDLEKSRAKRSDSCHDKDFEVCIRAKNNAWVI AKVTRGRELYMALEKAGETLLYASTAIEKFSNRYCEGAFSTD</aaseq>

Gene Sequence

<dnaseqindica>183..361#1035..1128#1552..1735#1833..1942#2439..2534#2636..2790#2854..3097#3270..3425#3711..3940#4359..4389#ccgccccgtcgccggccgcaaccaccaccaccactcgccgtcgcctccgccccccgcacgcgctcctcccctcccctcccctcccctcccctctccccggccgcgccgctcgccggatctctcccctcctcccttccaggaaccccagccaagcaggtagcgtgtgacgggggaagggggggatggggctctcgtcggcggcggcgggggaggggccgcagctgtgcgtgttcgacctgaggcgggggcagcaggaggggcaggagctcgacaagatcctcttcttccaccccaccgactgccccatcctcctccagctctccgtcatcggcctctgcgaggggatcatcaccttcgctaggtttgcagttttgctccacccccttctcactcgcatccccctcctgttcgtgctgctgcttggctcctcgcgcaggttggagctcttagcttattcggtcggagctttgttgctcgtggaggttagttgtttaggaacgatttgtagcacttagttgcgtggacgagcggaattccaacgaccttgaagctcatgggatttcaggcgaaggggtttatatgggaaaattctggcgtgttgattgtaatcggagttggaggtgaatgaatttggttcatcagggtgagatccttatgggggataattctggcgtgttgattgtaattggagtccgaggtgaatgtatttggttcgttaggatgagatccttcttagatccccatagaacttaacttttatctgcttcgagatagtatagtcagacatactacccgttctgttcttgaatccaaattaggtgcagtttcactgcttgttgctccttatttcagaatccgatttttaaattatttcacaaaattgtagtatatgtaactaggggcaaaatttgcctgttattttaatttttgcttttagttccaaccataagcactttctcgcgactggtgcttctgcacttataccttttgcttttatctgttggcttatctatctaaatattattcctgtgcagaatattttctcctgatgatgattgtgaggtgatagaatcagagaaacactcccatgttttttaccaagctgaagcagatatatggatggttctggtaatggctgttcttacattaacagttcatcactatttgttataaaccaaattgttgtactctagagcctcttcaattgggtgtagttaaaaacagcatgtaacctttgtctgtcacctattgtcattgaacaatatttactggaaatcctgaaaacattcaagaaccaagagtatttctagtctgccaccaaagtaaattctgtaacgagaacatgggcgttcatactcaagcatactatgccttcagtctcgcagatagtataatgaccattttggatttctttatttttaactgaagaagctatgagtttgcttcataacacttgttcctttcccagcaaattgtctgtaaatctttttttgcacttataacttgaatgattatcatactcatttccagtgaaaacttgttcatgcataggtagtggagaaaaacaaggacattgagtcaacttggcggtgtggtgcattgcaaggaattcttaaagaggttcactcgcttttcacaatgttccacggaccaattcgaactttacttgacaggcaacccagtgcagaacttgcccgtggtcaccttcgcacatttttcacagattatttaagtggtgagtctcgtttccattcatattgtgtataacatgagcgcaacattgccctttaaagaaatatacatttggtcttcatgaacatgttcttgagcagattttaatgctggtaaaaagatacaattgccaaccttccgtgattgcctaaaggagcgaggaactgtccaaatgctaacaatctcacgagaagtggcacttgaagttcaggtaggaaatgtactcttcaaacatgaaagacctcctagttacagaaatataactgtagtaccttttgatcttttcagggtacatgatagttgtctcttgcttttataattattgcttgtgtgaaatatgttatttttcttgctagcggcctgttatttatgtcctgtccagagttgtagtctggttttcagattatgagatcggcgttttcttgagggtctagtagtcattttcgaaggtagctaatgatgttataggcttaaaaacggttgctctgttgtacttgtaggagtatgtacttatgcagaagcctgctttccgagggggagaacttttggaatcaactctcacaacttaactacccctagatagctattgtctcactgttatagtgttatgaagctgtgcttaaagtactgtctaaagtcatcttgactctgataattacatagatttgttttctctgtttcaactattgatgcatgaatatttgcagtcactcaccacagttcttgggtcatgtcttggaaatgtcatgtgccaatcacttgtattatttgaagatctcttggtgtccacaacacttccaccggtacggggtctccctttaatcatcacttcttttataactttgttttctttgatggctttgagcagttcccatgtgattaatgtagttttaccactttgtaggatgatacactaaacctatatacttatgctatcttgaggttaactcctcgtgctttattgtccaatgcaacttcctggtcctatctgcggaaaggaacttcggttcatgctggccccacttctagttcatcaaatggaacagcttcagtagaaaggtatcgtagtcgatctcgtgatacttctcctggtggacaaaatcagatgcatcattatttcaggcctctccagcgtgagaaactatacaaaggaaaggatggttttgttgccgctggttccactacttcagaagttcgtggtgctgtggcttgggttcccatactgtggttccagcaggcagaagaccgcatgcatctctgtgtttatcagcacaagaacataaccattctgctactgattccagcttcatctctaataaatggagatgatggcattgctcatgtgaagagacatcttcttgaaaatgtgagtggcccttgcataatttccacccttttcatgatttcttgatgcggtactgagctcaagcaggccatgttgaatgaaaataagaaatattctcatgtctggtgtggcttgcaaaatattgatactgtggttgtgaacacatgctcatttttttatatttatattgcaggcatcacagaacattgtgactctggagctgaaattatcacgaggatggggaggagaaaatgcttatcatgttggtggatatcgctacttacttgttgatccagatagaaaagtatcaagagcctccccacctgggaaagtcaccaccctctcaaaggtttgttctgttgcatacttgcatatagagtaaacatacgatgtttcctacaatatgtgttaatggttctgttcttctcttcacctcaatatttccataaattttagatcctaaagattgttaatgttggtctgtttttgtagactaatatgttttagatgatcaattcgtatctcctgttcatttcttcctcactattgttcttcggttgcaattttacgtttttgtgttgaattggattgccatgcatttcttttaaccgtgctctgcaatgaaatcatgcaggattctctactttccttgaatagactaagagaagaaatagatttggagaagtcaagggccaagaggtctgactcttgtcatgacaaggattttgaagtatgcatcagagccaaaaataatgcatgggtcattgctaaagttacccgaggaagagaactttatatggcgttagagaaggctggtgaaacacttctttatgcatctactgccatcgagaagtttagcaacaggtatatttactcaataccttgtaaggtcatgttcggtaaatccctaggtggggggaatggaggggatttattccacacctattgtgatgtggaattattccctctcaatcccctccgatcctcttcaatccccatcaaactgaataaggcctaaaggggcagaagcatatcttaccacattatatgaccagctttggtttactgtgaccacttgagttataattccactgtcatgcattaaccgcctaaacgtggtatatctcaatatcttgtaaaggggcagaagcatatcttaccacattatatgaccagctttggttactttgatcacctgagttataatagttccattatcacgcattggcctaaccgcgtaaacatgctttcgatttttctaacgattgccttcctctctcaggtactgtgaaggagcattctctacagactagaacaccgaaatgacaacgattgttttatccaaaccactcacctatccagcttcgtcatttaggctgtgcggctcgctccctcatggtgtcgtgaatatggatcttgttattttgaagagattcgtacatgttgtacagctgccatgttgttgcctttctatgcatacaaaacaaatagcttcgtcagagaacaatacagcgcaggaaacagtcagtttcccctgccctgcgctccgacgtccttccagttccagattcgaccatcttaatttgtttgttgtatattctgacgatggacctgctgacttatgtagtagttcattcgattgcttcg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0427300, RefSeq:Os08g0427300