Os08g0435800

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Revision as of 13:02, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0435800| Description = Similar to Lipoate protein ligase-like protein| Version = NM_001068418.1 GI:115476573 GeneID:4345662| Length = 4629 ...")
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Gene Name

Os08g0435800

Description

Similar to Lipoate protein ligase-like protein

Version

NM_001068418.1 GI:115476573 GeneID:4345662

Length

4629 bp

Definition

Oryza sativa Japonica Group Os08g0435800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21253137..21257765

Sequence Coding Region

21254095..21254334,21256428..21256576,21256941..21257179,21257292..21257476

Expression

GEO Profiles:Os08g0435800

Genome Context

<gbrowseImage1> name=NC_008401:21253137..21257765 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:21253137..21257765 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgctggggtggctggagcgaggggcgcaggtcgcccgctcatgcggctggtcaccatgagcggcgtgccgatcctgcggcagctgcacctggaggaacggctgctgcgccgtaccggggataactggtgcatcatcaacgacggcacggctcctgccaccatcgtcatgggcgtgtcagggagagtttcggagcttgtcgagattgagccggtcctccgggataaagttccggttataaggaggttcagtggtggtggcacagtcatcgtcgatcaggggacagtgtttgccacattcatatgcagcaagaccgccattcctggactgcagccatttccgcgggatatcatgtcttggactggtcagttgtatgacaaggtgtttgatggtttcggtgaatttcatctgcgtgagaatgattatgcctttagtcaaaggaagtttggaggaaatgctcaatccattacaagagatcgttgggttcatcatacatcattcttatgggattatgatatgaagaatatggattatctcaaaatcccaaaacgtgcacctgattatcgactggcgaggaaccacacagatttcttgtgtcgcatgaaggagtatatgccatcacgatccgttttcaccgaagggatcatctctgccctcggagaccacttcacagtcgaacccacagaaccagaggcagtgctctctgatgacacagggtttaagccttccacgaagctgttatcgccacaagacctagaggatgttatcgcctcaaaagaatcactcaaggtacaggaagtcgaagcatga</cdnaseq>

Protein Sequence

<aaseq>MAAGVAGARGAGRPLMRLVTMSGVPILRQLHLEERLLRRTGDNW CIINDGTAPATIVMGVSGRVSELVEIEPVLRDKVPVIRRFSGGGTVIVDQGTVFATFI CSKTAIPGLQPFPRDIMSWTGQLYDKVFDGFGEFHLRENDYAFSQRKFGGNAQSITRD RWVHHTSFLWDYDMKNMDYLKIPKRAPDYRLARNHTDFLCRMKEYMPSRSVFTEGIIS ALGDHFTVEPTEPEAVLSDDTGFKPSTKLLSPQDLEDVIASKESLKVQEVEA</aaseq>

Gene Sequence

<dnaseqindica>3432..3671#1190..1338#587..825#290..474#gaagaggaaatctggtcaaactcgtcctcctctctcatctccctccccgtctcgccggcggaggtaggcttcgccctctcgcggcctcgcgtgcgcgtcgccggcgagagggccgcccgtaggcacggcgccgacggcctcgatccttccctatccacgcgctctgcgtggcatcctcgtcgaggtcccggaggggttgaccctgccaagctgcggcgcgcgcgcggcctgttcgacggaatgcgccactgagagactcccagcgtgagccgcccattccgagacaagaatggccgctggggtggctggagcgaggggcgcaggtcgcccgctcatgcggctggtcaccatgagcggcgtgccgatcctgcggcagctgcacctggaggaacggctgctgcgccgtaccggggataactggtgcatcatcaacgacggcacggctcctgccaccatcgtcatgggcgtgtcagggtaagcaagcacttcttcctggtggccgccgtaaacaatgtggtgtagtgccgtgtcctgctcgttgttgaggagacgacttctgttgatgacggggtttcggtgatgacaggagagtttcggagcttgtcgagattgagccggtcctccgggataaagttccggttataaggaggttcagtggtggtggcacagtcatcgtcgatcaggggacagtgtttgccacattcatatgcagcaagaccgccattcctggactgcagccatttccgcgggatatcatgtcttggactggtcagttgtatgacaaggtgtttgatggtttcggtgaatttcatctgcgtgagaatggtatgccatagcgtctggtctttcatcacttgacagcaaattttgtaatgcccctattttaccgaaattgatggaaatttccatgttcgtaatcgttatttcattctgccctctatagcatgtatgacattgattaataaaaaaacatgatgtgttttatactacatgtacaacttgcatattcatatcctagttttcatttaaaagtctcaaattaaatgttcagttttttttattagtccaattttactatcgaagagatactaacaacatatttccttctgatgttgcttgagtatgtactttatgctgtagtaagtgttctcctagaagttaatttattcatgtatttttacttctgcagattatgcctttagtcaaaggaagtttggaggaaatgctcaatccattacaagagatcgttgggttcatcatacatcattcttatgggattatgatatgaagaatatggattatctcaaaatcccaaaacgtgcacctgattatcgactggtacagttcttttcatattatttttccctctatatacttatcaacacctagattttaacatttcaggcaaacataaaatttgtagtttggttaggtagtagatatgcttggatatcagttcctgtagtttgtaagctaataatcaaatttaggattactagctaaatacccatgctttgctatggattagaataaattataagtgtgccaatattgcttggagttaattaattgtgaggtttttgggacaatttcgtccctgttagatgtctttgtacaataaatttgtattctagagatgaaataagatagaattcatatgtagaaggattatttgtgatatcaaagctcatgaaggagtatttggttccaaaaaaaggactatacaacaaagttggtggggagcagattcactgccaccaccattgcattcttttaaaagagtatagatatttccacaatatagcgaagaaaaactgagctataaactgctggttagtagctacctggctattgtagttcaagataactaatgcactgaacaagctggtagtggcttcaatatttttttttcctaccagacggtcttataatgtgttccatagttctgaaaacttgtgttgacggaaaacgcgagtccactggttgtctggttaatgatttgctgcttgaaccacctttatcttaatattgataatttattaccagggtactacttttattctgaaatactatgaacataactatagaagtgccactttatattaacgacaaaatggagatacagagtaatctagtcacctgtacctgcatggaacctaactgcatgtgtatcccgattgagcaatttaggtcaggctgtctctgcaagcctctacctctactgatctttgcccccacccagtctgtaccaatggcagatgatggcccttctgaattttggtggatgacggtgattgtggatctgtgctccgctccatattgttggacgacaataaactaaccagattgggagagaagataggccatgggagcccaaggtgctgtctgggccagaccaccagtcagcccatttaacccttttctatttctttctcttctcatgtccaacaaaaaggcagttcgattgcttcgaaactgtccgtttgctggttttgcaagattgttgggcctgttttctcttgtccacttccacaaacaatctttgaaaggagctgtgccattaaggccatggttcaggttttctcctgttaaaacttccagtctgatctggttatttagactatctatgcacatgacttccaatactgacttctgttgtagtaagcgagcttctgcctagaatttggtctgaagtgtgaaaacatttttgcagtctgtggttagaaccaaatgccagtaactgatcactaatgattttagcaacatcaacagtaattctgcagaaaagtagaacagtagtagttttaagggtgtatcactcgactaggtccagccagcccaaagagttgagcaatgcaaaactctagcttaccattgactgatgatattgaaaccttttctttttccgggggatgatattgaaaccttaaaagtgaagtactcaagggatttcaatataagcatttattttcttgtacttgaatatcatctagctgaaaacaaagcattgagtggagcatactggttttctacctgctgttggatgtgaagatctggtattgcatgaaacaatttataaattccagcggctgcaagcagcaacttgtctgggaacctgctgatatcctctggaccactagcagattagctttgatcctcaagtggcccattgccaccggtacctaaatgtacacatctccttttcccgtagaacaaaattcaattattcgttatatgtaatgatggttctgaagtcatcacacgcttttgttcaattcaatgtatgttttgattttaggaatgctaaaactagaactgagcctaaatcacagacgctgtgattgcgcggcttgcatttgtgagctttttaactttagggctcctcgacattatgctgatgttcatatcaattgccctatcttatttttcaggcgaggaaccacacagatttcttgtgtcgcatgaaggagtatatgccatcacgatccgttttcaccgaagggatcatctctgccctcggagaccacttcacagtcgaacccacagaaccagaggcagtgctctctgatgacacagggtttaagccttccacgaagctgttatcgccacaagacctagaggatgttatcgcctcaaaagaatcactcaaggtacaggaagtcgaagcatgacaacagctgtgaagatgacttcttttctcatgatcatgcctgacaagcggtaccatcgaacagtgaataaaatcaaccttccagtttggacggcgttgtgctcactgaaaatttggcaccgaaggacacaaccacagcttccttgaagcggacttccgcatctaaagcatcattgctcaaacagctaattgttattcattccggtttcggaatcttttttactggaataatcagctggagaacacaaatgttccttcgctaacgccatcctcatctcttataagttctaaccacactctttttgacctgtgttaacctgttcttcattcctcaaccatagtatgtgatatgtccagagcagtcaagcagaagctctccttgtcaccaccaccagccagtgcccagtaacccaaagtggcaggcagcctgagtgatcccctgctccaaattattcccctctgccaatcctaagcaggtactattactaacctgtggctcacctcacctgacctgctccccctttttttttgactgcatgtgacttccttacctgcaagtttgcatctggttttttaacttttaaccgcagatcgagctgatcacagtcatggatcgaccagccagggcggccggccgtgtggctgctctgcttgatctggataggctccgggggaggagaaagactgagagagaatagtagcttgtactgttacttgcgtgtgcccccacaaacctgcaggatcacacggggggagcgagggggcgtgtgatggatggatggatgcgggatggaggaggtcgccatggataacggacaaaaggccatcgcgtcatgcacgaacgcggccacagtgccccgtgcacggacactcggcgcgtaccgtcgccagggcgggcgcggccgtacgccgaccggagcagagaccggatgatgatatgatttggtgtttgatagtag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0435800, RefSeq:Os08g0435800