Os08g0442000

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Revision as of 13:02, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0442000| Description = Protein of unknown function DUF566 family protein| Version = NM_001068449.1 GI:115476635 GeneID:4345694| Length = 35...")
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Gene Name

Os08g0442000

Description

Protein of unknown function DUF566 family protein

Version

NM_001068449.1 GI:115476635 GeneID:4345694

Length

3545 bp

Definition

Oryza sativa Japonica Group Os08g0442000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21627577..21631121

Sequence Coding Region

21627577..21628828

Expression

GEO Profiles:Os08g0442000

Genome Context

<gbrowseImage1> name=NC_008401:21627577..21631121 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:21627577..21631121 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgccgtgaagacagaggggaggaaggccgcaggtaccgtcgactgcgccttgcggcagccgctggtgccaccggagaagaacattgctgctccggcaggtcggaggagggaggtggcctccaggttcaagtccggcggcacgccggcgccacaggctgctgcttcctcggtgaggcgatgcacgtctccaagtctgagcagggcttcagcagctgaaggcacagcatcgacaaacagagcacagtcagctgagaggaggaggtcttccacgccttcttccagctcgacgccgtccggtggtggtggcggcgctgcgtcgaggcccaggacgccggtgcgtgttgcggcagccaccgaggtacatggcatctctcgtcgtgcagccagtacaaagccccctgatggcttgtgggcatcagctcgtagcgtgcctccattgcttcagaaggagtccatggcaatggcaacctctgccaagaagagacacaagcttgctgatggctcatcttctgaccagaccaaggtgcaggcaagaaacgtgaccgagactgagaggaaaagaagtcctcttagagggaggaacattggcaaccaatgtgagaatgctcggccatcagagactccaaacaagagggtcgttgagcaacaccgatggccggcggcaatgatgggtggccgtggctctgccgtcttaacttcgagaagcaatggtgttgccaacacgcctatcaggtcagtcactccatcaaaccctacaagggggctttcaccaaggaggatttgtccagctgaagtcaaagccaatggtctgaatcagccattgaacggattggcaaagagattggctacacatgagagcagaagagaggataagacagaatctggtagtgatgtttcttcacagacatcagaaaactctaaagctgctactcgcccgagcaggactctgtcttcacctgttctacatcgctcgtcgtcaccaaacaaggtcttgtcagctgcatcccctgcttctacagcctttcaaagtcctttgaggacaaggccttcggcaccttgccgatcacgatgttgttcaacaagtcaatcaggcgttgcacctcttgtgtttaactatatagttgatgcgaggaaagggaagaagagtgcaagccagtttgagaatattcaccaattacgtctgctgtataatagatgcctgcagtggcagtttgtaaatgctcgttcagaagatacactaaccttcc</cdnaseq>

Protein Sequence

<aaseq>MDAVKTEGRKAAGTVDCALRQPLVPPEKNIAAPAGRRREVASRF KSGGTPAPQAAASSVRRCTSPSLSRASAAEGTASTNRAQSAERRRSSTPSSSSTPSGG GGGAASRPRTPVRVAAATEVHGISRRAASTKPPDGLWASARSVPPLLQKESMAMATSA KKRHKLADGSSSDQTKVQARNVTETERKRSPLRGRNIGNQCENARPSETPNKRVVEQH RWPAAMMGGRGSAVLTSRSNGVANTPIRSVTPSNPTRGLSPRRICPAEVKANGLNQPL NGLAKRLATHESRREDKTESGSDVSSQTSENSKAATRPSRTLSSPVLHRSSSPNKVLS AASPASTAFQSPLRTRPSAPCRSRCCSTSQSGVAPLVFNYIVDARKGKKSASQFENIH QLRLLYNRCLQWQFVNARSEDTLTF</aaseq>

Gene Sequence

<dnaseqindica>2294..3545#tttttctccacggccccaccaccaccctcagtagtaaccgtgcggcgcgttcctccctctaccacgccacctccttcctctgcacgcgagaaaatctgcaggagttcgccgcacggcaacagctcgggatcccatcgccgccactaacctccgatccctcgcgcgcggcgaggaggccgacgaggcggcggcggcggcggcgacccgccggtccggcaacggagggggctcctcgcgccgcgatccccgatcgagccgaggtgagttcaacttgcagcttagtagcatactgctccactgctcgtgcgtcctgttcgttgcttcgcctcctctgatcggattgggttcgtgcgtgaagctgcattctcccagcgtttcctaaatcctaatcccctcatccttaaacccccaaatgctttagggattcgtgaaattttttgggggcattggagaaatttgtttccatctgtttccgtttgtagcattcttcaccacattcgagattccaaacggctttcaatttttttttctcgtttcaaagattccgcaatcgctctcgtcaatttgaaacagttccgagtaatcgggaaaaccccgttcattatttatttattactattcgaaacgtttcgaaacggagatttttttttttggcaaaattggttatatagcatcgaaagtttacgtttttggttttgtagcaccgaaagttaccggttcactttaatagcacctaaagttcaccatgtttctatttttaacacttccgtcaattctcgatcgttttccgtccgtcttgatccagccacacacacgatatgacgtttctacccctcacaagtacaagtataatgcatgtcaatgaggggtagaaatataatatcatgtgtgtggctggatcaataatgataaagacggacggaaaaattaacggaagtgctaaaaatgggaacagggtgaactttggatgctattaaagtgaaccggtaactttcggtgctataaaactaaaaagtgaactttcgatgctatataaccaattttgccttttttttttgtgggggtagtggacgattcgagttggcccagccgcttcgcgttcgtgctcctgcgtgcgtgcgctgtcgtcgcgatccagacgtacagtgagctttgaaaagggtgagccctttgcgccgaagctaagcgtccctttccgtgcgattgggctccgattcgctgtacatcgtgagcacggataggcccttcaatttgggtcttatatacgccatcgagctagatttatttccttctcgttttcttgccacatttgatcgcgaagccggtttggagaattttggagattctgctcatgttttccagtgagtgaaatgtgactgttgcatcggctggtgccatgtgaataggtatctggtagatttggattttgttttcttgcctgcatcgaacagtacaaaaatcttacgatgcattgcaagtttgtagttctggtcttctggaatggtgaggtgttaactcttaaagagtaatttactcttcgaagaatgatcccattcccataatgtttgtttccgatgaagaaaacaagtagtgaaagcagtagaataaactttctagaatctagatacaaagatccatgttgcgtggacgcatgtgtccctgtcggctccaacaacttcaggggaaaaaaaaggtgaacctaattctctcctcgtccttggtcgaactcatccatgtaactagtaccatgtagcagcagcaattcgcatttcacatcaagaggccatgttggattaatttgcagatttgcagttactgcactgttgcaatcctgtactaggccccaaccaagcaaacacgggagctttccttttcttccttggggcactttacgcccacacgacgagagggaccgggtgggcagtagcaacaaattggacaatcctttgcatgtaaatggccgtgacactaggttgtcgtcatccatcgttgtgaataatgtgcaatcgtccatgctgtttggttgcctgcatttgccgttctttgacgtggtggcctggtgggggaggggagaggcggagagccttcatgtttgtttgtttgtgttattgtgtcagaaggttaatgcacgcatgcatgtttggatttttgtatcagtttatcctggtggttggcgtcgtcttttggtagatctctctggtgatattgcctgctgaggagagtggtgggtagctttggtgatagctggccagtacatcaatgtgggcgtttcttggagcagctactcgactccatggatgccgtgaagacagaggggaggaaggccgcaggtaccgtcgactgcgccttgcggcagccgctggtgccaccggagaagaacattgctgctccggcaggtcggaggagggaggtggcctccaggttcaagtccggcggcacgccggcgccacaggctgctgcttcctcggtgaggcgatgcacgtctccaagtctgagcagggcttcagcagctgaaggcacagcatcgacaaacagagcacagtcagctgagaggaggaggtcttccacgccttcttccagctcgacgccgtccggtggtggtggcggcgctgcgtcgaggcccaggacgccggtgcgtgttgcggcagccaccgaggtacatggcatctctcgtcgtgcagccagtacaaagccccctgatggcttgtgggcatcagctcgtagcgtgcctccattgcttcagaaggagtccatggcaatggcaacctctgccaagaagagacacaagcttgctgatggctcatcttctgaccagaccaaggtgcaggcaagaaacgtgaccgagactgagaggaaaagaagtcctcttagagggaggaacattggcaaccaatgtgagaatgctcggccatcagagactccaaacaagagggtcgttgagcaacaccgatggccggcggcaatgatgggtggccgtggctctgccgtcttaacttcgagaagcaatggtgttgccaacacgcctatcaggtcagtcactccatcaaaccctacaagggggctttcaccaaggaggatttgtccagctgaagtcaaagccaatggtctgaatcagccattgaacggattggcaaagagattggctacacatgagagcagaagagaggataagacagaatctggtagtgatgtttcttcacagacatcagaaaactctaaagctgctactcgcccgagcaggactctgtcttcacctgttctacatcgctcgtcgtcaccaaacaaggtcttgtcagctgcatcccctgcttctacagcctttcaaagtcctttgaggacaaggccttcggcaccttgccgatcacgatgttgttcaacaagtcaatcaggcgttgcacctcttgtgtttaactatatagttgatgcgaggaaagggaagaagagtgcaagccagtttgagaatattcaccaattacgtctgctgtataatagatgcctgcagtggcagtttgtaaatgctcgttcagaagatacactaaccttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0442000, RefSeq:Os08g0442000