Os08g0450700

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Revision as of 13:03, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0450700| Description = Chaperonin Cpn60/TCP-1 family protein| Version = NM_001068477.1 GI:115476691 GeneID:4345724| Length = 2677 bp| Defi...")
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Gene Name

Os08g0450700

Description

Chaperonin Cpn60/TCP-1 family protein

Version

NM_001068477.1 GI:115476691 GeneID:4345724

Length

2677 bp

Definition

Oryza sativa Japonica Group Os08g0450700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22091709..22094385

Sequence Coding Region

22091709..22092205,22092468..22092621,22092741..22093085,22093570..22094385

Expression

GEO Profiles:Os08g0450700

Genome Context

<gbrowseImage1> name=NC_008401:22091709..22094385 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:22091709..22094385 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggataatactgaggaatgcaatactcgatcttcttccttgtatagcatggaaatgctagaaaatgagcctgtagattttgaaaacaatagctcactctggctgcctcctgaacctgaggatgaagaggacgaccatgatggtgctttatgtgatgaggatgatggggaggatgccacaggagagtggggatatctacgctcaaacagttttggcagcggacattgtcgaagtagagataagtcagctgaggaacacaagagagccatgaaagacattgttgatgggcattttcgggcattggttgctcaacttcttcaggcggaaaaggtacagttggttgataaatctggcaaacagagttggctagatatagttacttctctgtcttgggaagctgcatctattctaaaaccagataccagcaaagggggacggatggaccctggtggctatgtgaaggtgaaatgcttggcttgtggtcgtccaagtgatagttttgttgtaaaaggagttgtttgtaagaagaatgttgctcatcggcgcatggcgtcacggaaagaaaagccacgcatcctgatccttggtggtgcacttgaatatcagcgcatatcgaatttgctttcaagttttgatactttactgcagcaggaaacagattatttgaaaatggcagttgcaaagatcaaagcccaccaaccaagtgtagtgttggtagagaaatctgtgtctcgatatgctcaggatttattcttggagaaaaacatttcacttgttctgaatatcaaaaggccacttctggaaaggatatcacgttgcactggtgctcatatagttccgtcaattgattacgtgtcatcccaaaagcttgggcattgtgatctattccatgtggagaaatatgttgaagagcatgggactgctggagaaggtggaaagaaaatgctgaagacccttatgttttttgaaggctgcccaaagcccttgggttgtacaatattgctcaaaggagctaatggcgatgagctgaaaaaagtgaagcatgttgtgcaatatggagtctttgcagcctatcacttggctctggaaacatcttttcttgtggatgaaggtgcaacacttccagaactccctcttaagtcaccaattattgttgctttgccagataagccttctagtgccgatagatccatttcaactatacctattttacaaatgcctactgcttcatcaccaaacgatagcttgcaagcatttgatgtgcaaacggatggttcaacatttaatggttttcaaacaatggaccaaacaatggtaatgtgctctcctgagtataaaagctgcaaaaaactgggagctggttctgcccaaaccgaatctgcccatttcaatggccaggataaaaatattgcctgtttgcatggtatggttccttggtcatctactgatcccttggttcagcaatcggccagttcactttgtcattgtccttcttgttctagagatgtagttaataaaaagcattttgaagaacgtcaacctgaaacatctggacataccctggataatgatttcaatgcgttgtctgcacatcgaacaaatttggagtctgttgagagcggtcacttatttgcctataattctgagaatggtgacaagataagagctaaactgtctgttcctctcaatgtgcaaatttctcttgatgatgacagttcaaaggatgattcagtaataaaaaaagatgaaattccggcatctcctgctgacaaccagagtatattggtttctctgtcttcccgttgtgtttgg</cdnaseq>

Protein Sequence

<aaseq>MDNTEECNTRSSSLYSMEMLENEPVDFENNSSLWLPPEPEDEED DHDGALCDEDDGEDATGEWGYLRSNSFGSGHCRSRDKSAEEHKRAMKDIVDGHFRALV AQLLQAEKVQLVDKSGKQSWLDIVTSLSWEAASILKPDTSKGGRMDPGGYVKVKCLAC GRPSDSFVVKGVVCKKNVAHRRMASRKEKPRILILGGALEYQRISNLLSSFDTLLQQE TDYLKMAVAKIKAHQPSVVLVEKSVSRYAQDLFLEKNISLVLNIKRPLLERISRCTGA HIVPSIDYVSSQKLGHCDLFHVEKYVEEHGTAGEGGKKMLKTLMFFEGCPKPLGCTIL LKGANGDELKKVKHVVQYGVFAAYHLALETSFLVDEGATLPELPLKSPIIVALPDKPS SADRSISTIPILQMPTASSPNDSLQAFDVQTDGSTFNGFQTMDQTMVMCSPEYKSCKK LGAGSAQTESAHFNGQDKNIACLHGMVPWSSTDPLVQQSASSLCHCPSCSRDVVNKKH FEERQPETSGHTLDNDFNALSAHRTNLESVESGHLFAYNSENGDKIRAKLSVPLNVQI SLDDDSSKDDSVIKKDEIPASPADNQSILVSLSSRCVW</aaseq>

Gene Sequence

<dnaseqindica>1..497#760..913#1033..1377#1862..2677#atggataatactgaggaatgcaatactcgatcttcttccttgtatagcatggaaatgctagaaaatgagcctgtagattttgaaaacaatagctcactctggctgcctcctgaacctgaggatgaagaggacgaccatgatggtgctttatgtgatgaggatgatggggaggatgccacaggagagtggggatatctacgctcaaacagttttggcagcggacattgtcgaagtagagataagtcagctgaggaacacaagagagccatgaaagacattgttgatgggcattttcgggcattggttgctcaacttcttcaggcggaaaaggtacagttggttgataaatctggcaaacagagttggctagatatagttacttctctgtcttgggaagctgcatctattctaaaaccagataccagcaaagggggacggatggaccctggtggctatgtgaaggtgaaatgcttggcttgtggtcgtccaagtgataggtaaacaaatttacccttctgcagattatggtcaaactgttatgattttatatctgtctgctttggagtattcattttccttatagttaaaaaaatatgaatacgacagtgactcagccttttgtaattcaaattcatgatgcaaacttgctggcaattttgttttatcaagttattggcctttgaaatttcacactttattactttttcgtatcttattagtgctccatgtaagagcttcattttggttctttatttccagttttgttgtaaaaggagttgtttgtaagaagaatgttgctcatcggcgcatggcgtcacggaaagaaaagccacgcatcctgatccttggtggtgcacttgaatatcagcgcatatcgaatttgctttcaagttttgatactttactgcagcaggtattgccattaatatctttttatgcatatgttgtaaagccgaagttcattttaagggcggtatagattgaatgttatgttgctattggtgatgcgttgtcatgtcctttttgctccaggaaacagattatttgaaaatggcagttgcaaagatcaaagcccaccaaccaagtgtagtgttggtagagaaatctgtgtctcgatatgctcaggatttattcttggagaaaaacatttcacttgttctgaatatcaaaaggccacttctggaaaggatatcacgttgcactggtgctcatatagttccgtcaattgattacgtgtcatcccaaaagcttgggcattgtgatctattccatgtggagaaatatgttgaagagcatgggactgctggagaaggtggaaagaaaatgctgaagacccttatgttttttgaaggctgcccaaagcccttgggttgtacagtaagtattcagttgctaactcagtatctcagttataacacttaccatttgtcatatgttgcagctcctttgctttatctatttaatccttagtctgtgaagcattcctttaaaccataccgtactttattttttcctccctaaaccctaatatgagtattcagctgaaatataacaatggaaagggggaaaaaacaaatcaatgcatttcaaggatacagtgaaggttgaggttgaatcaaatcaatacattgaaaaataacctgcaagtgatcatgtattaatttctgtgcaatatgatttgttaagaacctattccttcacaaacaactaatatcatttggtattaccctggcgtggatgtttgctccttgaagagtgtagcgcttcacgatcaacgttaatacttactctagtactttacgaaagaattgaataataaaattgaagtcaatttcatgtgctaactattcctaatctgtagatattgctcaaaggagctaatggcgatgagctgaaaaaagtgaagcatgttgtgcaatatggagtctttgcagcctatcacttggctctggaaacatcttttcttgtggatgaaggtgcaacacttccagaactccctcttaagtcaccaattattgttgctttgccagataagccttctagtgccgatagatccatttcaactatacctattttacaaatgcctactgcttcatcaccaaacgatagcttgcaagcatttgatgtgcaaacggatggttcaacatttaatggttttcaaacaatggaccaaacaatggtaatgtgctctcctgagtataaaagctgcaaaaaactgggagctggttctgcccaaaccgaatctgcccatttcaatggccaggataaaaatattgcctgtttgcatggtatggttccttggtcatctactgatcccttggttcagcaatcggccagttcactttgtcattgtccttcttgttctagagatgtagttaataaaaagcattttgaagaacgtcaacctgaaacatctggacataccctggataatgatttcaatgcgttgtctgcacatcgaacaaatttggagtctgttgagagcggtcacttatttgcctataattctgagaatggtgacaagataagagctaaactgtctgttcctctcaatgtgcaaatttctcttgatgatgacagttcaaaggatgattcagtaataaaaaaagatgaaattccggcatctcctgctgacaaccagagtatattggtttctctgtcttcccgttgtgtttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0450700, RefSeq:Os08g0450700