Os08g0452100

From RiceWiki
Revision as of 13:03, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0452100| Description = Proteinase inhibitor, propeptide domain containing protein| Version = NM_001068487.2 GI:297608675 GeneID:4345734| Le...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0452100

Description

Proteinase inhibitor, propeptide domain containing protein

Version

NM_001068487.2 GI:297608675 GeneID:4345734

Length

2648 bp

Definition

Oryza sativa Japonica Group Os08g0452100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22199069..22201716

Sequence Coding Region

22199150..22201540

Expression

GEO Profiles:Os08g0452100

Genome Context

<gbrowseImage1> name=NC_008401:22199069..22201716 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:22199069..22201716 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgtcggcgtcccgcactctcctgctgctggtggtggtggtggttgtggccgctgccgttggaggagtgttgggtgggggaggggaggagaggacgttcatcgtgcgggtggatgcggacgcgaagccctcggcgttcccgacgcacgcgcactggtacgaggcggcggtgatggcagcggagggtggtggtggtggaggggagtggcgggaggggggcccgctgatccacacctactccgccgccttccacggcttctccgcgcggatgtcgccggctgcggcggcggcgctggcggaggctcccggggtggcggcggtggtgccggagcgggtccggcagctcgccaccacccgctcgccgcggttccttgggctgctgtcgtccccgccgtcggcgctcctcgcggactcggattttggttccgacctcgtcatcgccatcatcgacaccggcatctcccccacccaccgcagcttccacgaccgtgggcttggtccggtgccgtccaagtggcgcggggtgtgctcgtcggggcctgggttcccgcccaactcctgcaatcgcaagctcgtcggcgcgcggttcttctccgccgggtatgaggccacctccggccgcatgaacgagacggcggaggtcaggtcgccgctcgacaccgatgggcacgggacccacacggcctccatcgccgccggccgctacgtgttcccggcgtccaccctcggctacgcccggggcgtggctgccgggatggcgcccaaggcacgcctcgccgcgtacaaggtgtgctgggtgggcggctgcttcgactccgacatccttgcggctttcgatgccgccgtcgccgacggcgtcgatgtcgtgtccctcagcgtcggtggcgtcgtcgtgccgtactaccttgacgccattgccattggggcattcggggcgacggaggctgggattgttgtttcggcttcggccggcaatggcggccctggtgggctcactgtgaccaatgtggctccctggatggccaccgttggcgctgggtccatggaccgcgccttcccggccaacgtgcagctcggcaatggtcaagtgctcgacggtgtcagcgtgtacggcgggccagcgctccaatccggcaagatgtatgagcttgtatatgctggagcaagcagcggcgctgcctcgtctgcggctgacggctactcggcgtccatgtgcctcgacggctcgctcgaccccgccgcggtgcggggcaagatcgtggtgtgcgaccgcggcgtgaactcgcgcgccgccaagggcgacgtggttcaccgcgcgggcggcatcgggatggtgctcgccaacggggtgttcgacggggagggcctcgtcgccgactgccacgttctgccagccacagccgtcggcgcggccgctggcgacaagctccgtaagtacattgggtcgtcgacgcggcaggcgccggccaccggcaccatcttgttcgaaggcacccacctcggcgtgcatccggcgcctgtggtggccgcgttctccgcgcgtggccccaatccccaatccccggaaatactcaagccagacctgattgcccccggcctaaacatcctcgccgcatggcccagcggcgtcgggccggccggcatcccctccgacggccgccgcacggaattcaacatcctctcgggcacgtccatggcttgcccgcacatctccggcctcgccgcattgctcaaggcggcgcatcctacctggagccccgcggcgatcaagtcagcgctcatgaccaccgcctacatcaaggacaacagcaacggcaccatggtggacgagtccacgggcgtcgtggccgacgtgttcgacttcggcgcagggcacgttgacccgatgcgcgccatggaccctggtctcgtctacgacatcacccccgtggactacgtcaacttcctctgcaacctgaactacaccgagcagaacatccgggcgatcacgcggcgccccgcggactgccgcggcgcgcggcgcgcggggcacgccgggaacctcaactacccgtccatgtccgccacgttcgccgcggacggcaccagggcgacgatgaagacccacttcatccggacggtgaccaacgtcggcggcgggcgcgcggtgtaccgcgcgacggtgaggtcgcccgaggggtgcgcggtgaccgtgcagccgcggcagctggcgttccggcgcgacgggcagaagctgagcttcacggtgcgggtggaggccgcggcgccagccaagaagatggagcccgggagctcgcaggtgaggagcggcgcggtgacgtggagcgacgggaggcacgccgtgaacaccccggtcgtcgtgacagtgcaagcgccgctgcagtaa</cdnaseq>

Protein Sequence

<aaseq>MASSASRTLLLLVVVVVVAAAVGGVLGGGGEERTFIVRVDADAK PSAFPTHAHWYEAAVMAAEGGGGGGEWREGGPLIHTYSAAFHGFSARMSPAAAAALAE APGVAAVVPERVRQLATTRSPRFLGLLSSPPSALLADSDFGSDLVIAIIDTGISPTHR SFHDRGLGPVPSKWRGVCSSGPGFPPNSCNRKLVGARFFSAGYEATSGRMNETAEVRS PLDTDGHGTHTASIAAGRYVFPASTLGYARGVAAGMAPKARLAAYKVCWVGGCFDSDI LAAFDAAVADGVDVVSLSVGGVVVPYYLDAIAIGAFGATEAGIVVSASAGNGGPGGLT VTNVAPWMATVGAGSMDRAFPANVQLGNGQVLDGVSVYGGPALQSGKMYELVYAGASS GAASSAADGYSASMCLDGSLDPAAVRGKIVVCDRGVNSRAAKGDVVHRAGGIGMVLAN GVFDGEGLVADCHVLPATAVGAAAGDKLRKYIGSSTRQAPATGTILFEGTHLGVHPAP VVAAFSARGPNPQSPEILKPDLIAPGLNILAAWPSGVGPAGIPSDGRRTEFNILSGTS MACPHISGLAALLKAAHPTWSPAAIKSALMTTAYIKDNSNGTMVDESTGVVADVFDFG AGHVDPMRAMDPGLVYDITPVDYVNFLCNLNYTEQNIRAITRRPADCRGARRAGHAGN LNYPSMSATFAADGTRATMKTHFIRTVTNVGGGRAVYRATVRSPEGCAVTVQPRQLAF RRDGQKLSFTVRVEAAAPAKKMEPGSSQVRSGAVTWSDGRHAVNTPVVVTVQAPLQ</aaseq>

Gene Sequence

<dnaseqindica>82..2472#gtgtccagctttgtgctttcccctcctcctcctcccccatctccactgatctcctcacctctccggatccggcattccgccatggcgtcgtcggcgtcccgcactctcctgctgctggtggtggtggtggttgtggccgctgccgttggaggagtgttgggtgggggaggggaggagaggacgttcatcgtgcgggtggatgcggacgcgaagccctcggcgttcccgacgcacgcgcactggtacgaggcggcggtgatggcagcggagggtggtggtggtggaggggagtggcgggaggggggcccgctgatccacacctactccgccgccttccacggcttctccgcgcggatgtcgccggctgcggcggcggcgctggcggaggctcccggggtggcggcggtggtgccggagcgggtccggcagctcgccaccacccgctcgccgcggttccttgggctgctgtcgtccccgccgtcggcgctcctcgcggactcggattttggttccgacctcgtcatcgccatcatcgacaccggcatctcccccacccaccgcagcttccacgaccgtgggcttggtccggtgccgtccaagtggcgcggggtgtgctcgtcggggcctgggttcccgcccaactcctgcaatcgcaagctcgtcggcgcgcggttcttctccgccgggtatgaggccacctccggccgcatgaacgagacggcggaggtcaggtcgccgctcgacaccgatgggcacgggacccacacggcctccatcgccgccggccgctacgtgttcccggcgtccaccctcggctacgcccggggcgtggctgccgggatggcgcccaaggcacgcctcgccgcgtacaaggtgtgctgggtgggcggctgcttcgactccgacatccttgcggctttcgatgccgccgtcgccgacggcgtcgatgtcgtgtccctcagcgtcggtggcgtcgtcgtgccgtactaccttgacgccattgccattggggcattcggggcgacggaggctgggattgttgtttcggcttcggccggcaatggcggccctggtgggctcactgtgaccaatgtggctccctggatggccaccgttggcgctgggtccatggaccgcgccttcccggccaacgtgcagctcggcaatggtcaagtgctcgacggtgtcagcgtgtacggcgggccagcgctccaatccggcaagatgtatgagcttgtatatgctggagcaagcagcggcgctgcctcgtctgcggctgacggctactcggcgtccatgtgcctcgacggctcgctcgaccccgccgcggtgcggggcaagatcgtggtgtgcgaccgcggcgtgaactcgcgcgccgccaagggcgacgtggttcaccgcgcgggcggcatcgggatggtgctcgccaacggggtgttcgacggggagggcctcgtcgccgactgccacgttctgccagccacagccgtcggcgcggccgctggcgacaagctccgtaagtacattgggtcgtcgacgcggcaggcgccggccaccggcaccatcttgttcgaaggcacccacctcggcgtgcatccggcgcctgtggtggccgcgttctccgcgcgtggccccaatccccaatccccggaaatactcaagccagacctgattgcccccggcctaaacatcctcgccgcatggcccagcggcgtcgggccggccggcatcccctccgacggccgccgcacggaattcaacatcctctcgggcacgtccatggcttgcccgcacatctccggcctcgccgcattgctcaaggcggcgcatcctacctggagccccgcggcgatcaagtcagcgctcatgaccaccgcctacatcaaggacaacagcaacggcaccatggtggacgagtccacgggcgtcgtggccgacgtgttcgacttcggcgcagggcacgttgacccgatgcgcgccatggaccctggtctcgtctacgacatcacccccgtggactacgtcaacttcctctgcaacctgaactacaccgagcagaacatccgggcgatcacgcggcgccccgcggactgccgcggcgcgcggcgcgcggggcacgccgggaacctcaactacccgtccatgtccgccacgttcgccgcggacggcaccagggcgacgatgaagacccacttcatccggacggtgaccaacgtcggcggcgggcgcgcggtgtaccgcgcgacggtgaggtcgcccgaggggtgcgcggtgaccgtgcagccgcggcagctggcgttccggcgcgacgggcagaagctgagcttcacggtgcgggtggaggccgcggcgccagccaagaagatggagcccgggagctcgcaggtgaggagcggcgcggtgacgtggagcgacgggaggcacgccgtgaacaccccggtcgtcgtgacagtgcaagcgccgctgcagtaaagacgacaaatccgacgcgatcatctcagtgttgttcagtgagtgagacattgctccttggaccataattgcattagtatctagtagtgttagtattattattattatacatatgtataagcttaagctatactgggactctagctcagggttctgtaatcttcttcttctacctc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0452100, RefSeq:Os08g0452100