Os08g0459600

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Revision as of 13:03, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0459600| Description = Similar to 12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate- 10,11-reductase 3) (OPDA-reductase 3) (...")
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Gene Name

Os08g0459600

Description

Similar to 12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate- 10,11-reductase 3) (OPDA-reductase 3) (LeOPR3)

Version

NM_001068510.1 GI:115476757 GeneID:4345762

Length

3492 bp

Definition

Oryza sativa Japonica Group Os08g0459600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22635190..22638681

Sequence Coding Region

22635325..22635413,22635527..22635667,22636398..22636528,22637525..22637707,22637802..22638442

Expression

GEO Profiles:Os08g0459600

Genome Context

<gbrowseImage1> name=NC_008401:22635190..22638681 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:22635190..22638681 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcggccgccgccggatcagcagcggcagaagcaggcgccgctcttctcgccgtaccagatgccccgcttccgcctcaaccaccgggtggtgctggcgccgatgacgcggtgcagggcgatcggcggggtgcccggcccggcgctggcggagtactacgcgcagcggaccacccagggtggcctgctcatctccgagggcaccgtcgtctcgcccgctggcccggggtttcctcatgtccctgggatatacaatcaagagcagactgatgcatggaagaaggtggtggatgctgttcatgccaagggaggcatctttttctgccagttatggcatgtaggcagagcttctcaccaagtataccagccaaacggtgctgcaccaatatcctcaactgataagccaatatcagcaagatggagaatactgatgcctgatggctcctatggcaagtatcctaaacctaggcgcctggcagcatcggaaatacctgaaattgtcgaacaatatcgtcaagccgccattaatgccattgaagcaggttttgatggcattgagatccatggtgctcatggctatatcattgatcaattcctaaaggatggaatcaatgaccgcactgacgagtatggtggctcactttccaaccgctgccggttcctacttgaggtaactagggctgtggtttctgccattggagcagaccgagtcgcggtgaggatatcaccagccattgatcaccttgacgcctatgattcagaccccattaagctcggcatggccgttgttgagcggctgaatgctctccagcagcagtcagggcggctcgcctacctccacgtcacgcagccacggtacaccgcctacgggcagaccgagtctgggcagcatggcagtgccgaggaggagagccgcctgatgcgcaccctccggggcacgtaccagggcacattcatgtgcagtggcggctacacgcgggagcttgggttggaagcagtggagagcggcgatgccgacctggtgtcgtacgggcggctcttcatatcaaacccggacctggtcgagcggttcaggctgaacgccgggctgaacaagtacgtgcgtaagacattctacacgcccgatcctgtcgtgggttacacggactatccgttcctcggacagcctaagtcgcggatgtaa</cdnaseq>

Protein Sequence

<aaseq>MDRPPPDQQRQKQAPLFSPYQMPRFRLNHRVVLAPMTRCRAIGG VPGPALAEYYAQRTTQGGLLISEGTVVSPAGPGFPHVPGIYNQEQTDAWKKVVDAVHA KGGIFFCQLWHVGRASHQVYQPNGAAPISSTDKPISARWRILMPDGSYGKYPKPRRLA ASEIPEIVEQYRQAAINAIEAGFDGIEIHGAHGYIIDQFLKDGINDRTDEYGGSLSNR CRFLLEVTRAVVSAIGADRVAVRISPAIDHLDAYDSDPIKLGMAVVERLNALQQQSGR LAYLHVTQPRYTAYGQTESGQHGSAEEESRLMRTLRGTYQGTFMCSGGYTRELGLEAV ESGDADLVSYGRLFISNPDLVERFRLNAGLNKYVRKTFYTPDPVVGYTDYPFLGQPKS RM</aaseq>

Gene Sequence

<dnaseqindica>136..224#338..478#1209..1339#2336..2518#2613..3253#aattattttttcccatttcgctcacctgttcccctcctccgccctctccccaactcgccattttccccgtcttccacagtgacaaccaccaccccacgctttccccttcctcctcgcgatccagcagcgggagagatggatcggccgccgccggatcagcagcggcagaagcaggcgccgctcttctcgccgtaccagatgccccgcttccgcctcaaccaccggtgagccgctcgccgccccccgcccccgtggtctggtctcgctgcgctcgggattttcgaggtcttcttttgcttacgtttacggggtgtggtgtgcgtggacgtggtggcagggtggtgctggcgccgatgacgcggtgcagggcgatcggcggggtgcccggcccggcgctggcggagtactacgcgcagcggaccacccagggtggcctgctcatctccgagggcaccgtcgtctcgcccgctggcccggggtaatctcgtcgcttcgccctcctcccctttccgcgctttcacgatctgttggcacatgctttgatgctcctgcgctcgactagttttattgctgctaatattatctaaagaaaagtttactgctaaatctggcaggagtggcatcagaacaaaattgtctttttaggatgatttggtactggatatttggcagggtagtgttaagttttcatcaagtggggttggaatattcttattttttttattagtgggtggcggttatggccaacacaaaagagtattaagctgtttgtatttttgacatgggtttatctttcacacaatattttggatgggcagtacaaaatgccaaattagattcctcctcttaaccctgtctcaagaggagttgttggagcatgctacataggatgctatgatgaatggccttatggtcttagatagtgagatcaaaattgtaagtaaatttgggagagatgcactgagttcacaagtaatgttagtgtccgccgctgcaaacttaagacatatcctagacacattcctgaaaagtaaaataagatatccctcactgtctatgatatattgtcacgctctatatgtttggagttatgtagacagtcttctgatacccggtactgatgaacttgttgcaagtttatgtcacttctgtactgtcatgtcataactcagaatatgcatattaagtagcgaatgttgttattgaaggtttcctcatgtccctgggatatacaatcaagagcagactgatgcatggaagaaggtggtggatgctgttcatgccaagggaggcatctttttctgccagttatggcatgtaggcagagcttctcaccaaggtatgttcatagcttcatagtatgttagaatgataaagcagttccactaaattaaattaccaaaagttgtactagctatatatcattgtcctgtgccttggtaattttagtactgtctcctttgatttttataaggtgtattttaatttcaaaaagtcttcaagatagatctttgaccattgatttctgatagactgtatcctttacagctataaaacgcgtactgtgaaagcatttgaaatacgattctcttggtataactatacacaataatgcacttgtaatttgactatttctgaaaatcctgccttatataaatcaatggagggatgctttgtcatgtggaaaaagggtgtatttttgtctgaatctggagtaactctgttccctgtttttctcgagattcatttcttctcaaagggtaagggaagaaaggttgaattaaattatgcttagtcaatgcaataccaaaaacctaggtagttttttttggctgggctcagtgatcatggataggaatgaggggtggtctgtttcagtaattgcctgtgttcaccttgtttgtcccagaccctctatgcctatccctctctcttgctgtattttgttcttttaacctcttcttccttttatgtaatttgaatttcatttctggtaatggaaatgggggccatgtagcccttgatcaaaaaaaaaaaagcactaccaaaaacagtcacactgtattgtgtaatgagatagatgaaatatgttatttcccttttcatttccttcttcaacaaattatggcctaattgcaactctatgtctgtacctatgctctgttcatgttgttacttgttactagggacatccagtagttgtacttatttttctttatcagagttcatatgattaataatatgcactgattcaaatgtgttagtcttcacttcaagctttttttttaataacaaattcacttcaaatgttgaccaatgccttttcacctttcagtataccagccaaacggtgctgcaccaatatcctcaactgataagccaatatcagcaagatggagaatactgatgcctgatggctcctatggcaagtatcctaaacctaggcgcctggcagcatcggaaatacctgaaattgtcgaacaatatcgtcaagccgccattaatgccattgaagcaggtaaagatgcaacacataaatttgcaatcagtccaaccatgggccatcggaaatctcaccgattttctgatatggagatgaatcacatgtacaggttttgatggcattgagatccatggtgctcatggctatatcattgatcaattcctaaaggatggaatcaatgaccgcactgacgagtatggtggctcactttccaaccgctgccggttcctacttgaggtaactagggctgtggtttctgccattggagcagaccgagtcgcggtgaggatatcaccagccattgatcaccttgacgcctatgattcagaccccattaagctcggcatggccgttgttgagcggctgaatgctctccagcagcagtcagggcggctcgcctacctccacgtcacgcagccacggtacaccgcctacgggcagaccgagtctgggcagcatggcagtgccgaggaggagagccgcctgatgcgcaccctccggggcacgtaccagggcacattcatgtgcagtggcggctacacgcgggagcttgggttggaagcagtggagagcggcgatgccgacctggtgtcgtacgggcggctcttcatatcaaacccggacctggtcgagcggttcaggctgaacgccgggctgaacaagtacgtgcgtaagacattctacacgcccgatcctgtcgtgggttacacggactatccgttcctcggacagcctaagtcgcggatgtaaatgtactgcgggataagtaaatcaaggatacgattgtgtattgtaaggaaaataaagggcaacggtgaggtgatttagcttatttttgggacctaatttgacggtaatttattctttcaccaaatctgatatgatccattgctgattcagtagctactctagcctatgtaaaccttgggtcatcagcacagattgtatctatatgtgtattgcataatgtttcatatcagttgtctagc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0459600, RefSeq:Os08g0459600