Os08g0466200

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Revision as of 13:04, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0466200| Description = Similar to KUP-related potassium transporter| Version = NM_001068535.1 GI:115476807 GeneID:4345789| Length = 3532 bp...")
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Gene Name

Os08g0466200

Description

Similar to KUP-related potassium transporter

Version

NM_001068535.1 GI:115476807 GeneID:4345789

Length

3532 bp

Definition

Oryza sativa Japonica Group Os08g0466200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22992762..22996293

Sequence Coding Region

22992799..22992861,22993538..22993760,22993846..22994139,22994243..22994500,22994590..22995845

Expression

GEO Profiles:Os08g0466200

Genome Context

<gbrowseImage1> name=NC_008401:22992762..22996293 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:22992762..22996293 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcttcatctcacacggtgacagtctccatggatgttgaagccggacagaaaaacaaagataagaaggggatcagccaagatctgatcctggcttacaagactcttggtgttgttttcggtggccttgttacctcaccactctacgtctacccatccatgaatttgacgaatcctactgaagaagactacctgggaatatacagcatcatgttctggaccctcactctcattggcgtagtcaagtacatatgcatcgctctcaacgctgacgaccacggcgaaggtggcacatttgccatgtattctctgctctgtcagcacgcaaacattgggatccttccatccaagaagatctacactgaagaagagaacctgatctcgaatcagcctgtcgtagctggaaggcctggaagactgagaaggttcatcgaaagcagcataatcgccaggaggctgctgctgctcacagccatcctaggcatgtgcatgctcatcggcgatggcatcctcactcctgcaatctcagtcttgtcagcgattgatggactcagaggcccgttcccatccgtcagtaaacctgctgtggagggcctgtcggccgcgattctcgttgggctgttcttgctgcagaagtacggcacgtcgaaggtgagcttcatgttctcgccgatcatggcggcgtggacgttcgccaccccggtcatcggcgtgtacagcatctggcgctactaccctggcatcttcaaagccatgtcgccgcattacatcgtcagattcttcatgacgaaccagaccagaggctggcagctactcggcggcaccgtcctctgcatcacaggtgccgaggcgatgttcgcggatcttggtcacttcagcaagaggtccatccagatcgcgttcatgtcgagcatatacccttcgctggtgctgacgtacgccgggcagacggcgtacctgatcaacaacgtcgacgacttcagcgacgggttctacaagttcgtgccgcggccggtgtactggccgatgttcatcatcgcgacgctggcggcgatcgtggcgagccagtcgctgatctcggccaccttctccgtcatcaagcagtcggtggtgctggactacttcccgcgggtgaaggtggtgcacacgtccaaggacaaggaaggggaggtgtactcgccggagaccaactacatgctgatgctgctgtgcgtgggcgtcatcctcggcttcggcgacggcaaggacatcggcaacgcgttcggggtggtggtgatcctcgtgatgctcatcaccaccatcctgctcacgctggtgatgctcatcatctggggcacccacgtcgtgctggtggcgctctacttagtgccgttcctgctcctcgaggccacatacgtgagcgccgtgtgcaccaagatcctccgcggagggtgggtgccgttcgcggtgtcggtggcgctggcggcggtcatgttcgggtggtactacggccggcagcggaagacggagtacgaggcggcgaacaaggtgacgctggagcggctcggcgagctgctgtccggccccggcttgcgccgcgtcccgggcctctgcttcttctacagcaacaggcaggacggcgggtggctcaccccggtgctcgcgcactacatcaggaacatgcggtcgctgcacgaggtgaccgtgttcctcacgctccggtacctgctggtggcgaaggtggacggcaaggacagggtgcaggccgtgcgccggctggggccagcgggggtgtacggctgcacgatccagtacgggtacgccgacgcgatcgacttcgaggaggacgacatcgccgggcaggtggtgggggcgctgcgggagcgggtcgtcgacggggaggaggagggggagcgggtggaggcggcgagggcggccggggtggtgcacgtgagggggaagatgaggttccacgtcgggaaggacacgaggctgttcgaccgggtgctgctcgggttctacgagttgctgcacggcgcgtgccgctccgcgctgccggcgctcgggatcccgctgcagcagcgcgtcgagatcggcatgctctacaaggcctaa</cdnaseq>

Protein Sequence

<aaseq>MSSSHTVTVSMDVEAGQKNKDKKGISQDLILAYKTLGVVFGGLV TSPLYVYPSMNLTNPTEEDYLGIYSIMFWTLTLIGVVKYICIALNADDHGEGGTFAMY SLLCQHANIGILPSKKIYTEEENLISNQPVVAGRPGRLRRFIESSIIARRLLLLTAIL GMCMLIGDGILTPAISVLSAIDGLRGPFPSVSKPAVEGLSAAILVGLFLLQKYGTSKV SFMFSPIMAAWTFATPVIGVYSIWRYYPGIFKAMSPHYIVRFFMTNQTRGWQLLGGTV LCITGAEAMFADLGHFSKRSIQIAFMSSIYPSLVLTYAGQTAYLINNVDDFSDGFYKF VPRPVYWPMFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRVKVVHTSKDKEGEVY SPETNYMLMLLCVGVILGFGDGKDIGNAFGVVVILVMLITTILLTLVMLIIWGTHVVL VALYLVPFLLLEATYVSAVCTKILRGGWVPFAVSVALAAVMFGWYYGRQRKTEYEAAN KVTLERLGELLSGPGLRRVPGLCFFYSNRQDGGWLTPVLAHYIRNMRSLHEVTVFLTL RYLLVAKVDGKDRVQAVRRLGPAGVYGCTIQYGYADAIDFEEDDIAGQVVGALRERVV DGEEEGERVEAARAAGVVHVRGKMRFHVGKDTRLFDRVLLGFYELLHGACRSALPALG IPLQQRVEIGMLYKA</aaseq>

Gene Sequence

<dnaseqindica>38..100#777..999#1085..1378#1482..1739#1829..3084#atgcactcaagtttcaacctcccttctccaacttgcaatgtcttcatctcacacggtgacagtctccatggatgttgaagccggacagaaaaacaaagatgtaagtgagagtgattaaccgtagcgctatcattacatctcatcagtcgtacttgttcatcactatcttcatgatcagatcatctcctacgtaatacctagattggatacaaatccttggttaaccactgctaattaacttcatgatggggttaaccactgttaaactaacttcaagaaggaactcaggaaggtagatgattggtaagagcaggagtgctggttcccaaatgtttgggtttcattttttttataaaaaaaatacgcaaaaggaacagtgtatttttgtattaggataaataaggtttacaactaaagaaccaaaataagagagctaagcctattctcgagacatgaatgtggctaccagaatatttgggttgtggacagtaaaaatcagtaaaattaaccatgtagggatgtattggttgagtggttgatactgtttgctgttctcccctagtttcttctgaaaaaaagttttggacattggctaacaaagtgtatattatgtatgaatgaatgattatgctgatgtgtagttaagtgagtttgttgatctgtgcttgatgaaagcacatgtaatctggtgctgacattagtaaaccttgcattcacaaagatacaaatgtttgattctattttctacattatttaccctgctgttattgttgcagaagaaggggatcagccaagatctgatcctggcttacaagactcttggtgttgttttcggtggccttgttacctcaccactctacgtctacccatccatgaatttgacgaatcctactgaagaagactacctgggaatatacagcatcatgttctggaccctcactctcattggcgtagtcaagtacatatgcatcgctctcaacgctgacgaccacggcgaaggttggatcaaatgccccaatgttcaattggtgaacaatctgtagctacaatttctaacttgatatgatcactgtgtgttttgcaggtggcacatttgccatgtattctctgctctgtcagcacgcaaacattgggatccttccatccaagaagatctacactgaagaagagaacctgatctcgaatcagcctgtcgtagctggaaggcctggaagactgagaaggttcatcgaaagcagcataatcgccaggaggctgctgctgctcacagccatcctaggcatgtgcatgctcatcggcgatggcatcctcactcctgcaatctcagtcttgtcagcgattgatggactcagaggcccgttcccatccgtcagtaaacgtaaggcacactgactttgcagaacataacatatctgatcagtgatcaatgtgataaatcatataccgatgttgttttctgataaaaaacaattgtcgtgcagctgctgtggagggcctgtcggccgcgattctcgttgggctgttcttgctgcagaagtacggcacgtcgaaggtgagcttcatgttctcgccgatcatggcggcgtggacgttcgccaccccggtcatcggcgtgtacagcatctggcgctactaccctggcatcttcaaagccatgtcgccgcattacatcgtcagattcttcatgacgaaccagaccagaggctggcagctactcggcggcaccgtcctctgcatcacaggcacgtagtacatgttcttgtctgatcatgtcgaaacgtctcactgaatttgattttgttttgagatatatggcgatgcgtggatgcaggtgccgaggcgatgttcgcggatcttggtcacttcagcaagaggtccatccagatcgcgttcatgtcgagcatatacccttcgctggtgctgacgtacgccgggcagacggcgtacctgatcaacaacgtcgacgacttcagcgacgggttctacaagttcgtgccgcggccggtgtactggccgatgttcatcatcgcgacgctggcggcgatcgtggcgagccagtcgctgatctcggccaccttctccgtcatcaagcagtcggtggtgctggactacttcccgcgggtgaaggtggtgcacacgtccaaggacaaggaaggggaggtgtactcgccggagaccaactacatgctgatgctgctgtgcgtgggcgtcatcctcggcttcggcgacggcaaggacatcggcaacgcgttcggggtggtggtgatcctcgtgatgctcatcaccaccatcctgctcacgctggtgatgctcatcatctggggcacccacgtcgtgctggtggcgctctacttagtgccgttcctgctcctcgaggccacatacgtgagcgccgtgtgcaccaagatcctccgcggagggtgggtgccgttcgcggtgtcggtggcgctggcggcggtcatgttcgggtggtactacggccggcagcggaagacggagtacgaggcggcgaacaaggtgacgctggagcggctcggcgagctgctgtccggccccggcttgcgccgcgtcccgggcctctgcttcttctacagcaacaggcaggacggcgggtggctcaccccggtgctcgcgcactacatcaggaacatgcggtcgctgcacgaggtgaccgtgttcctcacgctccggtacctgctggtggcgaaggtggacggcaaggacagggtgcaggccgtgcgccggctggggccagcgggggtgtacggctgcacgatccagtacgggtacgccgacgcgatcgacttcgaggaggacgacatcgccgggcaggtggtgggggcgctgcgggagcgggtcgtcgacggggaggaggagggggagcgggtggaggcggcgagggcggccggggtggtgcacgtgagggggaagatgaggttccacgtcgggaaggacacgaggctgttcgaccgggtgctgctcgggttctacgagttgctgcacggcgcgtgccgctccgcgctgccggcgctcgggatcccgctgcagcagcgcgtcgagatcggcatgctctacaaggcctaacggcgccgaacgccacgcacgcgccccacgaatccgtacgtacgtacgtggccattaattaccattagcagtataacccctattattagtgtggatattatgggtaccccatacccatacggcatggttatccgaccagtcataggggataacttatatctatagaatatgtaatagatcatgactcgggtattacgtttccttatatattacggaacagcctaaagtcctggtttgataatattgtaaagtagatttaggaaaccgataccgtattggttaaggtttctatcttgtaatcctgccccccaccctatataaggtgggcaggaggccctctagggggcatgagacaacctgatcgtcagatctataatacacccggcggattcaaatccccaaacaggagtagggtattacctctcattgagagggcccgaacctgtct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0466200, RefSeq:Os08g0466200