Os08g0471800

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Revision as of 13:04, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0471800| Description = Remorin, C-terminal region domain containing protein| Version = NM_001068551.1 GI:115476839 GeneID:4345805| Length =...")
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Gene Name

Os08g0471800

Description

Remorin, C-terminal region domain containing protein

Version

NM_001068551.1 GI:115476839 GeneID:4345805

Length

4187 bp

Definition

Oryza sativa Japonica Group Os08g0471800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:23301219..23305405

Sequence Coding Region

23301320..23301484,23302060..23302141,23302264..23302374,23302459..23303253,23303585..23303951
,23304466..23304547,23304724..23304930

Expression

GEO Profiles:Os08g0471800

Genome Context

<gbrowseImage1> name=NC_008401:23301219..23305405 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:23301219..23305405 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgagttgggggtgagctccacagcggcggcggaggaggagagggggtgttggtggggaggggatggaggaaggaggaggcggagggaggcggcggcggcggcggcggcggcggcgggtgctcggcgagctcgacgagccggggatcgtctctctgcgactcgcctttgcccagctttgtgcgccatcgtggtggaccggggtcagatctagagctcgatgggttgcccacttcctcctccaatgcttcctcagggtcacacgaggaggatcacgggccattgcaaggggtgaagggagaggggtggatgcaagtgcagggaccgatcaagaactcagctgcccgttctaccggagaatgccaagaccagcggtaccggttggggtctgttcttttccatggtaagaatgaacggaagcagcgcccggcttcagttgattttggctgccccagtgttgacagatcctccacgcattctccgggtttcttggtcaatggtaccggggcgatgaacaagggattgagtgtatcatcgcaaaataaaccaggtgcgccgactagcccaggaacaccaagctacaatcgtcagggtgcaacagttgttgggtatcagcagggttggagctctgaaagagttgccctgtcttcaaacggccagagaaggcattcaggcaacagcatggtgttaccacataatactgggagaacattgccctcaaaatgggaggacgcagagaggtggatcttcagtccgaatcccagcaatgcacttggaaggacctcaatcccgcagtcgcggcgacctaaggccaaaagtggacctcttggacctcctggcagatttagtgaaccatactcatcagtttcgtcatcgtcatatttgcttgacaccgggagagtaggaaacctcacggcaaactcacctttcctggctggggtcttgctgcctgagcatgtttgtgtgtccagtagccatgctggaagggatctaagtggtgcatctggtgaggataaaagcaatggcatgggaggcaggtctggtgaagcaaatggtgcacatcctgccgtgtggtctaccagagtttgccaacgaatggatagcgcagttcagtcgtctccgtcattgcctacttcccaagaatcagttcaagcttgcacagatgaacagatcgaaatcacaacagacttgaccaccagcagtaaacctgaaatttcgagaaaagatgtggcaacacagactagccctgagcttagcaggtcatcttctcctagcgggaggccttcattttcccgctcactatcagtacagcaagtcaaagagttggagagctgtttctctaagcttgagataagggatgtgcagatggatgatcgggttactctgaccaggtggtccaagaaacatgtcacacgaggctctgagaagaactcgacaaacattatagagtggaagaaaaagacagtggaatctaaatcttctgcctgggaagtaacagaaactgcaaagtgtatatcaaagattgagggagaggaagcaaagatgactgcatgggagaatctgcaaaaggcaaaagcagaggcagcaatacaaaagcttgtgatgaaacttgaaaagaaaagatcatactcactggagaggattttcaataccctcaggtcagctcataggaaaacacatgtgatacgcagcacaactaccacaaatcttgatcagcacatctccaggactgtgaaaaggccatcacaccttagcaagaatggccaaatgagttcgctgagtgggtgcttcacttgccatgccttctag</cdnaseq>

Protein Sequence

<aaseq>MRVGGELHSGGGGGEGVLVGRGWRKEEAEGGGGGGGGGGGCSAS STSRGSSLCDSPLPSFVRHRGGPGSDLELDGLPTSSSNASSGSHEEDHGPLQGVKGEG WMQVQGPIKNSAARSTGECQDQRYRLGSVLFHGKNERKQRPASVDFGCPSVDRSSTHS PGFLVNGTGAMNKGLSVSSQNKPGAPTSPGTPSYNRQGATVVGYQQGWSSERVALSSN GQRRHSGNSMVLPHNTGRTLPSKWEDAERWIFSPNPSNALGRTSIPQSRRPKAKSGPL GPPGRFSEPYSSVSSSSYLLDTGRVGNLTANSPFLAGVLLPEHVCVSSSHAGRDLSGA SGEDKSNGMGGRSGEANGAHPAVWSTRVCQRMDSAVQSSPSLPTSQESVQACTDEQIE ITTDLTTSSKPEISRKDVATQTSPELSRSSSPSGRPSFSRSLSVQQVKELESCFSKLE IRDVQMDDRVTLTRWSKKHVTRGSEKNSTNIIEWKKKTVESKSSAWEVTETAKCISKI EGEEAKMTAWENLQKAKAEAAIQKLVMKLEKKRSYSLERIFNTLRSAHRKTHVIRSTT TTNLDQHISRTVKRPSHLSKNGQMSSLSGCFTCHAF</aaseq>

Gene Sequence

<dnaseqindica>102..266#842..923#1046..1156#1241..2035#2367..2733#3248..3329#3506..3712#aaagctagtcgctgactgacgctgcccgccgtgtggccgtgcattgctgtccctgagcttgctgctgctggtggtggtgacgattctgctcggtagaggagatgcgagttgggggtgagctccacagcggcggcggaggaggagagggggtgttggtggggaggggatggaggaaggaggaggcggagggaggcggcggcggcggcggcggcggcggcgggtgctcggcgagctcgacgagccggggatcgtctctctgcgactcggttggtgatccctgcaagctgcaaccccgcattgccgattttgttggtgttgcattctcgaatactagctcgttaattttgttgcaaatgattgcgaatgcgatactctctctaaagcgtccttgcgattgcatttcctaatcctctcacatctcgtggtagaaatgaggaattttttgggcatggagactacaaaaagatgtgatttctgtgaaaggtctgggggggggggggaattttaggtgattagactgacgtttgtttgatgatgtccaatgcaagagagaagagacaggagacaacaaatcagatactgtggtgtaggtggacaactggggaaaccaatggagacaaacaaaaaagaaaaagaaaaagtggtcttggcaaatattggacgcttgcaaggaaaggggattgtgcttttcgatagaaaaatatgttttttttccctttcggggttctttttctcagctcactagttcattgctcatactacagtaggttcctgttgtttttatgattttaatcccaagacagttttgggacaggttttctaagacaattatttggtgcagcctttgcccagctttgtgcgccatcgtggtggaccggggtcagatctagagctcgatgggttgcccacttcctcctccaatggtgagtgcaaatgtggcggcgaacagcacattgcttgtactcttactgttgtttcttgtgaatgctctcgctgtgcacagctttacagcccttaaaagttgggggggttttgtgcttttcagcttcctcagggtcacacgaggaggatcacgggccattgcaaggggtgaagggagaggggtggatgcaagtgcagggaccgatcaagaactcagctgcccgttctaccggaggtaacatttttcatgaacttggtgattggtctaggtaggattttcatgagtgttaacctgttatgcctggatggtgtttgatagaatgccaagaccagcggtaccggttggggtctgttcttttccatggtaagaatgaacggaagcagcgcccggcttcagttgattttggctgccccagtgttgacagatcctccacgcattctccgggtttcttggtcaatggtaccggggcgatgaacaagggattgagtgtatcatcgcaaaataaaccaggtgcgccgactagcccaggaacaccaagctacaatcgtcagggtgcaacagttgttgggtatcagcagggttggagctctgaaagagttgccctgtcttcaaacggccagagaaggcattcaggcaacagcatggtgttaccacataatactgggagaacattgccctcaaaatgggaggacgcagagaggtggatcttcagtccgaatcccagcaatgcacttggaaggacctcaatcccgcagtcgcggcgacctaaggccaaaagtggacctcttggacctcctggcagatttagtgaaccatactcatcagtttcgtcatcgtcatatttgcttgacaccgggagagtaggaaacctcacggcaaactcacctttcctggctggggtcttgctgcctgagcatgtttgtgtgtccagtagccatgctggaagggatctaagtggtgcatctggtgaggataaaagcaatggcatgggaggcaggtctggtgaagcaaatggtgcacatcctgccgtgtggtctaccagagtttgccaacgaatggatagcgcagttcagtcgtctccgtcattgcctacttcccaagaatcagttcaaggtattgagcaccgtatttacccgtacttcttgtgcttagtcttggagtactagggccaaatggaatagtagagaacattgtttcttgattgtgatctttgtttgctaaaacaaagttaatataaaagagttccagttaactatacaaagtattctcgggaaaaaaaaattatgcaaagtattttgtcaataagcatgttggtacacaacatgattataattattaattagaatacactcatagatagatctttcaccatatgcaaataacgctcaaaatttggaagctagaagctagtaattattattcagaaacttttttcattttgcagcttgcacagatgaacagatcgaaatcacaacagacttgaccaccagcagtaaacctgaaatttcgagaaaagatgtggcaacacagactagccctgagcttagcaggtcatcttctcctagcgggaggccttcattttcccgctcactatcagtacagcaagtcaaagagttggagagctgtttctctaagcttgagataagggatgtgcagatggatgatcgggttactctgaccaggtggtccaagaaacatgtcacacgaggctctgagaagaactcgacaaacattatagagtggaagaaaaagacagtggaatctaaatcttctgcctgggaagtaacagaaactgcaaagtgtatatcaaagtaagggattgctatttctattaatcctttcagatggaaggttttgttttttttttgccttaccttatttcaggcatacaattgtttctgcatacctgtacttcatagaacactacgggaactaataaatgactgaatttgccttagaagactttaataagatggagattaaagaaagaagggcgtatagggacaatgcacttacttgttctacagtgtctatcttagtcattgtcgataactcaatgatgattttaggttttcttattacatctaagatcatcccattttgaagtgtgagatggaagtatacttgttgcattggttcaactaccatgctatattcatcatctctatttgagaactttatagtattttggaagtttggaattaaatccagccttatctaggtcaaacatccaattcaagtttcagaagataataaagctgcaataatttgctatgttttatcaaaattctgatggatgtatgcatatgcattatttctttgaaggattgagggagaggaagcaaagatgactgcatgggagaatctgcaaaaggcaaaagcagaggcagcaatacaaaagcttgtggtgtgttgtttcttccccgtctcttttaattaattttcttctcctgcatatatctaactttttccccctaatgtattgctaattagtgaatctacatttgctatttacagatgctttcttatgtgctgcttggaattttgacatctattcaattcacacattttatgatttttcagatgaaacttgaaaagaaaagatcatactcactggagaggattttcaataccctcaggtcagctcataggaaaacacatgtgatacgcagcacaactaccacaaatcttgatcagcacatctccaggactgtgaaaaggccatcacaccttagcaagaatggccaaatgagttcgctgagtgggtgcttcacttgccatgccttctagtatggtattatacagtcaagtaagacgagttcaattttgccaatactaacaaaaaagcctgatagattatgtagtacattttatatactgctgttccgtttctaatggctgatcaaggtccttttctttgatccattatgtgcataacttttttttaaaagaaagttttatgtgcttaactatcattggggatttttttttcaggcggcactgtcactttcaagatggaattggaggggggaaccaaaaggcttgctagtatagaatacagataagacctagcaggggaagccgaggctctcaatgatatccaatggtctgtcattacaagatttattctagaatttccctttttattctgctcaggaacaaaaggaagttgacgcagagggaaggagttgttactacacaccttgtgaagtatttgtaataataaaaatctctgcctatactcttcagggcggagtggtatcat</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0471800, RefSeq:Os08g0471800