Os08g0473800

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Revision as of 13:04, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0473800| Description = Similar to Alpha-amylase isozyme 3D precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)| Version = NM_001188...")
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Gene Name

Os08g0473800

Description

Similar to Alpha-amylase isozyme 3D precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)

Version

NM_001188693.1 GI:297726516 GeneID:9266633

Length

1927 bp

Definition

Oryza sativa Japonica Group Os08g0473800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:23428683..23430609

Sequence Coding Region

23429645..23430607

Expression

GEO Profiles:Os08g0473800

Genome Context

<gbrowseImage1> name=NC_008401:23428683..23430609 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:23428683..23430609 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gatgcaggggactccggggtgggtgaggatgtaggcgtagccctgcatgaccttgtcggaggggaacggccaaagcttctgcgtcgagccggtgtcgtggttgtcgacgaacgtgacggccttctctggcagccacccgatcatgccggcggccttgccgttgccgtcgcgcagccgccacagctcgccctggacgcccgcctgcaggaggcccttggtggtgaagtcgaacgtcatcgccggcccgccgacggcgttcacccagttcaccagctcctgccggccctggtcctggttggccgccggcttgccgtcgccgttgtagctcagcgagttccatatctcggcgacgacgaagcccggcttgcagctctcgacgtacatcttagcgatgtccgtggagtatcccttggcgaagtcgaggcgccagccgtcgaagccgacgtcggacttgagccagttgagccagtcggtgagctcccgctggacgcgcgggttgaggtggtcgatgtcgggcgccgcgccgaacccctcgccggtgtcgcggtggcccgtgccgtcggagtactgcgtgtcgtcgctgcagatcatgccggggccccagtcgaggcggtcgtcgggcgtcccgccctcgaacacgcagtacacgccgcgggcgtccttcttctcggcgcaccggtggttgatcacgacgtcggcgacgcactggacgcccttcccgtggaacgccgcgatcagcgacttgagctccgccgccgtgccgtacttggacgcgtccaggtcgtagagacgccccggcatgtacccctgcggcgccacggagtgcgacggcggcggcagccagacgtgggtgaccccggccttggcgatgtcgtcgacttggcctttcaacatgttgtaccagccaccctgctgcttccacgactcccagttgaaaccctgcatgatgcatgttataagtag</cdnaseq>

Protein Sequence

<aaseq>DAGDSGVGEDVGVALHDLVGGERPKLLRRAGVVVVDERDGLLWQ PPDHAGGLAVAVAQPPQLALDARLQEALGGEVERHRRPADGVHPVHQLLPALVLVGRR LAVAVVAQRVPYLGDDEARLAALDVHLSDVRGVSLGEVEAPAVEADVGLEPVEPVGEL PLDARVEVVDVGRRAEPLAGVAVARAVGVLRVVAADHAGAPVEAVVGRPALEHAVHAA GVLLLGAPVVDHDVGDALDALPVERRDQRLELRRRAVLGRVQVVETPRHVPLRRHGVR RRRQPDVGDPGLGDVVDLAFQHVVPATLLLPRLPVETLHDACYK</aaseq>

Gene Sequence

<dnaseqindica>3..965#acgatgcaggggactccggggtgggtgaggatgtaggcgtagccctgcatgaccttgtcggaggggaacggccaaagcttctgcgtcgagccggtgtcgtggttgtcgacgaacgtgacggccttctctggcagccacccgatcatgccggcggccttgccgttgccgtcgcgcagccgccacagctcgccctggacgcccgcctgcaggaggcccttggtggtgaagtcgaacgtcatcgccggcccgccgacggcgttcacccagttcaccagctcctgccggccctggtcctggttggccgccggcttgccgtcgccgttgtagctcagcgagttccatatctcggcgacgacgaagcccggcttgcagctctcgacgtacatcttagcgatgtccgtggagtatcccttggcgaagtcgaggcgccagccgtcgaagccgacgtcggacttgagccagttgagccagtcggtgagctcccgctggacgcgcgggttgaggtggtcgatgtcgggcgccgcgccgaacccctcgccggtgtcgcggtggcccgtgccgtcggagtactgcgtgtcgtcgctgcagatcatgccggggccccagtcgaggcggtcgtcgggcgtcccgccctcgaacacgcagtacacgccgcgggcgtccttcttctcggcgcaccggtggttgatcacgacgtcggcgacgcactggacgcccttcccgtggaacgccgcgatcagcgacttgagctccgccgccgtgccgtacttggacgcgtccaggtcgtagagacgccccggcatgtacccctgcggcgccacggagtgcgacggcggcggcagccagacgtgggtgaccccggccttggcgatgtcgtcgacttggcctttcaacatgttgtaccagccaccctgctgcttccacgactcccagttgaaaccctgcatgatgcatgttataagtaggtaagtgatcaatcgatcacacataaatatctcaaaattctaatgtgtttcttcagcaaaagtcttcacagaaagtgatgggtagtagagtactacgtacctggaagaggacctgtgcttgacccgagttacaggtcaagctgcagagcaccacgaggagcagcaaacacaagctgctggtgttcttcatatctgtgtaagctgaaaccgtgttcgatagtgagttgctgctaaccactactgatcgatctcttgtagatgatggatgatcgatgtgttcgtggcgaatgacctcgacgtcggggggcatatatagaacaccgggggcacggtcaccgtggcaggggaatgagaatgatcaggagagacgaccacaataaatggcgtggatatggataaggcaataaagcatggccacgtaggcgccgcgtcggccgcgtcggggcccggtctccaaggcgacgggatgcggcggcgtgatcgcgacgactgcctgaggcgggcgccggctacctcctcctccatccatcgccggcttggataaggcgagcatttctctgaactttcatcttcagagttcagacaaaaaagacagtgctacgtgttctagcaggctgatcgtatataatagggttgcagttagcctcttgactggccgcttgatctcccgtcatgtatatgcacatatggctcgtcctccttcaattcctgacatggcaattctatccacatctcggtgagaccctaatccggacctcgaaatgcgagaatcagataatgctggaatcaatgagtccgagttgttcatcgtcatcagccaatggagcaagccggaaagagagactactgttctactaagactagccatctcatctattgtagttgatgaatttatgtcagtatctatgaatgttacgagtatcagtatgtcataagtcataaccaagttcattacaaattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0473800, RefSeq:Os08g0473800