Os08g0473900
| Gene Name |
Os08g0473900 |
|---|---|
| Description |
Alpha-amylase isozyme 3D precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) |
| Version |
NM_001068559.1 GI:115476855 GeneID:4345814 |
| Length |
1985 bp |
| Definition |
Oryza sativa Japonica Group Os08g0473900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:23429295..23431279 |
| Sequence Coding Region |
23429335..23429544,23429669..23430607,23430696..23430977 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:23429295..23431279 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:23429295..23431279 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgccccccgacgtcgaggtcattcgccacgaacacatcgatcatccatcatctacaagagatcgatcagtagtggttagcagcaactcactatcgaacacggtttcagcttacacagatatgaagaacaccagcagcttgtgtttgctgctcctcgtggtgctctgcagcttgacctgtaactcgggtcaagcacaggtcctcttccagggtttcaactgggagtcgtggaagcagcagggtggctggtacaacatgttgaaaggccaagtcgacgacatcgccaaggccggggtcacccacgtctggctgccgccgccgtcgcactccgtggcgccgcaggggtacatgccggggcgtctctacgacctggacgcgtccaagtacggcacggcggcggagctcaagtcgctgatcgcggcgttccacgggaagggcgtccagtgcgtcgccgacgtcgtgatcaaccaccggtgcgccgagaagaaggacgcccgcggcgtgtactgcgtgttcgagggcgggacgcccgacgaccgcctcgactggggccccggcatgatctgcagcgacgacacgcagtactccgacggcacgggccaccgcgacaccggcgaggggttcggcgcggcgcccgacatcgaccacctcaacccgcgcgtccagcgggagctcaccgactggctcaactggctcaagtccgacgtcggcttcgacggctggcgcctcgacttcgccaagggatactccacggacatcgctaagatgtacgtcgagagctgcaagccgggcttcgtcgtcgccgagatatggaactcgctgagctacaacggcgacggcaagccggcggccaaccaggaccagggccggcaggagctggtgaactgggtgaacgccgtcggcgggccggcgatgacgttcgacttcaccaccaagggcctcctgcaggcgggcgtccagggcgagctgtggcggctgcgcgacggcaacggcaaggccgccggcatgatcgggtggctgccagagaaggccgtcacgttcgtcgacaaccacgacaccggctcgacgcagaagctttggccgttcccctccgacaaggtcatgcagggctacgcctacatcctcacccaccccggagtcccctgcatcttctacgaccacatgttcgactggaacctgaagcaggagataaccgcgctggcggcgatcagggagaggaacggcatcaacgccgggagcaagctccggatcgtcgtcgccgacgccgacgcatacgtcgccgtcgtcgacgagaaggtcatggtgaagatcgggacgaggtacgacgtgggcaacgcggtgccgtcggatttccatcagacggtgcacggcaaggactacagcgtctgggagaaggggtccctccgcgtcccggcggggcggcacctatag</cdnaseq> |
| Protein Sequence |
<aaseq>MPPDVEVIRHEHIDHPSSTRDRSVVVSSNSLSNTVSAYTDMKNT SSLCLLLLVVLCSLTCNSGQAQVLFQGFNWESWKQQGGWYNMLKGQVDDIAKAGVTHV WLPPPSHSVAPQGYMPGRLYDLDASKYGTAAELKSLIAAFHGKGVQCVADVVINHRCA EKKDARGVYCVFEGGTPDDRLDWGPGMICSDDTQYSDGTGHRDTGEGFGAAPDIDHLN PRVQRELTDWLNWLKSDVGFDGWRLDFAKGYSTDIAKMYVESCKPGFVVAEIWNSLSY NGDGKPAANQDQGRQELVNWVNAVGGPAMTFDFTTKGLLQAGVQGELWRLRDGNGKAA GMIGWLPEKAVTFVDNHDTGSTQKLWPFPSDKVMQGYAYILTHPGVPCIFYDHMFDWN LKQEITALAAIRERNGINAGSKLRIVVADADAYVAVVDEKVMVKIGTRYDVGNAVPSD FHQTVHGKDYSVWEKGSLRVPAGRHL</aaseq> |
| Gene Sequence |
<dnaseqindica>41..250#375..1313#1402..1683#attcccctgccacggtgaccgtgcccccggtgttctatatatgccccccgacgtcgaggtcattcgccacgaacacatcgatcatccatcatctacaagagatcgatcagtagtggttagcagcaactcactatcgaacacggtttcagcttacacagatatgaagaacaccagcagcttgtgtttgctgctcctcgtggtgctctgcagcttgacctgtaactcgggtcaagcacaggtcctcttccaggtacgtagtactctactacccatcactttctgtgaagacttttgctgaagaaacacattagaattttgagatatttatgtgtgatcgattgatcacttacctacttataacatgcatcatgcagggtttcaactgggagtcgtggaagcagcagggtggctggtacaacatgttgaaaggccaagtcgacgacatcgccaaggccggggtcacccacgtctggctgccgccgccgtcgcactccgtggcgccgcaggggtacatgccggggcgtctctacgacctggacgcgtccaagtacggcacggcggcggagctcaagtcgctgatcgcggcgttccacgggaagggcgtccagtgcgtcgccgacgtcgtgatcaaccaccggtgcgccgagaagaaggacgcccgcggcgtgtactgcgtgttcgagggcgggacgcccgacgaccgcctcgactggggccccggcatgatctgcagcgacgacacgcagtactccgacggcacgggccaccgcgacaccggcgaggggttcggcgcggcgcccgacatcgaccacctcaacccgcgcgtccagcgggagctcaccgactggctcaactggctcaagtccgacgtcggcttcgacggctggcgcctcgacttcgccaagggatactccacggacatcgctaagatgtacgtcgagagctgcaagccgggcttcgtcgtcgccgagatatggaactcgctgagctacaacggcgacggcaagccggcggccaaccaggaccagggccggcaggagctggtgaactgggtgaacgccgtcggcgggccggcgatgacgttcgacttcaccaccaagggcctcctgcaggcgggcgtccagggcgagctgtggcggctgcgcgacggcaacggcaaggccgccggcatgatcgggtggctgccagagaaggccgtcacgttcgtcgacaaccacgacaccggctcgacgcagaagctttggccgttcccctccgacaaggtcatgcagggctacgcctacatcctcacccaccccggagtcccctgcatcgtaagcaaaccatgcattatagtattatataccatgtcctgattaacctccaccgtacacgtgtcctgatgaacgcttcttgtggcagttctacgaccacatgttcgactggaacctgaagcaggagataaccgcgctggcggcgatcagggagaggaacggcatcaacgccgggagcaagctccggatcgtcgtcgccgacgccgacgcatacgtcgccgtcgtcgacgagaaggtcatggtgaagatcgggacgaggtacgacgtgggcaacgcggtgccgtcggatttccatcagacggtgcacggcaaggactacagcgtctgggagaaggggtccctccgcgtcccggcggggcggcacctatagcgggctcaagccctaaactgaacgggatagtcatgctcaaaccagtttctacacggcaagaatttactgattcttatacttttgcagtcaattaaattatggtttttatatatgtaattttgtatccgattgtagcgttcgaataagtaggcaggctctctagcctctaggttaattgcggggcatatgtagcttgccagttaattgtgtttgtatcacgcagtttgtaaccgttggtgcaatatataatgtcaggttcaggatgcagtaaaaaatcatactgcaccgatcagtgagttttt</dnaseqindica> |
| External Link(s) |
