Os08g0477900

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Gene Name

Os08g0477900

Description

Basic helix-loop-helix dimerisation region bHLH domain containing protein

Version

NM_001068582.2 GI:297608746 GeneID:4345836

Length

1611 bp

Definition

Oryza sativa Japonica Group Os08g0477900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:23660568..23662178

Sequence Coding Region

23660628..23660777,23660872..23661393

Expression

GEO Profiles:Os08g0477900

Genome Context

<gbrowseImage1> name=NC_008401:23660568..23662178 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:23660568..23662178 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgacggacggggagtgctcggcggcggcggtgaggaagggtgggtcgccggcggtgcggagccacagcgaggcggagcggaagcggcggcagcgcatcaacgcccacctcgccacgctccgcaccctcgtcccctccgcctcccggatggacaaggcggcgctgctgggggaggtggtgcggcacgtgcgggagctgcggtgcagggcggacgacgccacggagggcgccgacgtcgtcgtccccggggaaggcgacgaggtcggcgtcgaggacgaggacgacgacgagggcgagcgcgacgaggggtgttatgtcgtcggcggcggcgacaggcggtggcggcggcgcgtcagggcgtgggtgtgctgcgccgacaggccggggctcatgtccgacctgggccgcgccgtgcgctccgtcagcgcgcgccccgtgcgcgccgaggtcgccaccgtcggcgggaggacgcgcagcgtcctggagctcgacgtcgtcgtcgcctccgacgccgccgacaacgacagggccgtcgcgctctccgccctccgcgccgccctccgcaccgtgcttctcaaccgcgaggagctcctcgccgccgccgccgccgccgccaccgacggctacaagcggccacgcttctcgccgaggtgtagcagcctaacctaa</cdnaseq>

Protein Sequence

<aaseq>MVTDGECSAAAVRKGGSPAVRSHSEAERKRRQRINAHLATLRTL VPSASRMDKAALLGEVVRHVRELRCRADDATEGADVVVPGEGDEVGVEDEDDDEGERD EGCYVVGGGDRRWRRRVRAWVCCADRPGLMSDLGRAVRSVSARPVRAEVATVGGRTRS VLELDVVVASDAADNDRAVALSALRAALRTVLLNREELLAAAAAAATDGYKRPRFSPR CSSLT</aaseq>

Gene Sequence

<dnaseqindica>61..210#305..826#ctctcttttaaaccccacgacaaccacctcgcttgccattctggactgcgggtgagatcgatggtgacggacggggagtgctcggcggcggcggtgaggaagggtgggtcgccggcggtgcggagccacagcgaggcggagcggaagcggcggcagcgcatcaacgcccacctcgccacgctccgcaccctcgtcccctccgcctcccgggtacgtacgagatcgagacatccacgacgcccacgatggcgtgtgtgcgtgcgtgcgtgcgtctgacgaggttggtgtgcgtgcgtgcgtgcagatggacaaggcggcgctgctgggggaggtggtgcggcacgtgcgggagctgcggtgcagggcggacgacgccacggagggcgccgacgtcgtcgtccccggggaaggcgacgaggtcggcgtcgaggacgaggacgacgacgagggcgagcgcgacgaggggtgttatgtcgtcggcggcggcgacaggcggtggcggcggcgcgtcagggcgtgggtgtgctgcgccgacaggccggggctcatgtccgacctgggccgcgccgtgcgctccgtcagcgcgcgccccgtgcgcgccgaggtcgccaccgtcggcgggaggacgcgcagcgtcctggagctcgacgtcgtcgtcgcctccgacgccgccgacaacgacagggccgtcgcgctctccgccctccgcgccgccctccgcaccgtgcttctcaaccgcgaggagctcctcgccgccgccgccgccgccgccaccgacggctacaagcggccacgcttctcgccgaggtgtagcagcctaacctaagcttcgctactactcgccgtacgtacgtacgcggcaaaacgaatctaagctaagctaggggaacaatgcgatgctgatacactactaccggtttcgtgtcacaactagcttggtgtttttttgtttgtttgtattccctccatctcaatatataagagatttcgaagtaatacgatatatcctctgtttcatattataagattttctagcattatccacgttctcatatatatatatatatatatatatatatatatatatatgaatgaatgaatgtggttaatatgttagaaagtcttataacctgaaacggagggagcagtattataaatctggacaaattttctttctagattcgtaatactaatatgtatcatattcttctaaaatctcttatattatgtaacggaggggtactgcgtgtcatttttccttgctgcttgcctgcatggtactagtaggctggtaattgtacttggcaaccagtatcgtcacgtagactttgtcaggtatactgttgcacggttgcagtgttgcgaagttgcaacagtggagatgtgtggcactggtgcactttttgtccaccagtacttcagtagtttcagtattggctctactgcagatcacatgaatcccttcgtgttttgccggcagtaggggccagtgtgctgtacttctacaagtctacaacacgacagggcttgctcctgctgctccggagttaatacatgcaggaaatgaaatagtagaagcaaaggtctaaatgcagggcttagttcacattc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0477900, RefSeq:Os08g0477900