Os08g0484600

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Revision as of 13:05, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0484600| Description = OSK4| Version = NM_001068618.1 GI:115476973 GeneID:4345873| Length = 5104 bp| Definition = Oryza sativa Japonica Gr...")
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Gene Name

Os08g0484600

Description

OSK4

Version

NM_001068618.1 GI:115476973 GeneID:4345873

Length

5104 bp

Definition

Oryza sativa Japonica Group Os08g0484600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24030313..24035416

Sequence Coding Region

24031440..24031623,24031978..24032162,24032601..24032783,24032874..24033005,24033136..24033321
,24033659..24033748,24033818..24033901,24033982..24034122,24034202..24034432
,24034811..24034924

Expression

GEO Profiles:Os08g0484600

Genome Context

<gbrowseImage1> name=NC_008401:24030313..24035416 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24030313..24035416 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaggaaatgctagaggcggtgggcattctgaggcactgaagaactacaatctaggaagaactttaggtattggttcatttggaaaagtgaagattgcagagcataagcttacagggcacagagttgctataaagatcctgaaccgtcgccaaatgagaaatatggaaatggaggagaaagcaaagagagaaatcaagatattgaggttgttcattcatccccatatcattcgcctttatgaggtcatatacactcctacggatatatatgttgtgatggagtactgcaagtttggagaactgtttgattacattgttgagaaaggcaggttgcaggaagatgaggctcgccgaatcttccagcagattatatctggggttgaatactgccacagaaacatggtggttcatcgtgatctgaagccagaaaacttgctactggattcaaagtataacgtaaagcttgctgactttggtttgagtaatgtcatgcatgatggccattttttaaagacaagctgcgggagtccgaattatgctgctccagaggtgatctctggtaaattatatgctggacccgaggttgatgtatggagctgtggagtgatcctttatgctctcctttgtggtactcttccatttgatgacgagaatatccccaacctattcaaaaagataaagggtggtatatatactctcccaagtcatttatctgctctggccagggatttgatcccaaggatgcttgttgttgatccaatgaagagaatcacaattcgtgaaattcgagagcatcaatggtttcagattcgccttcctcgttacttagcagtgcctccaccagacacagcacagcaagccaaaatgattgatgaagatacccttcaagacgttgtaaacttgggttatgaaaaggaccatgtgtgtgaatctctgcgcaatagactgcaaaatgaggcaactgttgcatattatttgctattggacaatcgattccgagctaccagtggctatctgggagcagactatcaagaatcattggagaggaatcttaatcgctttgcttcatcagaatcagcaagttcaaatacaaggcattatctcccaggaagcagtgatcctcatgccagtggtttgcgcccacattatcctgttgaaagaaaatgggctcttggacttcagtctcgagctcagcctcgcgagataatgattgaggtcctaaaggcacttgaagacttaaatgtctgctggaagaagaatggacagtacaacatgaagtgcagatggagcgttgggtatcctcaggccactgatatgttagatgtcaaccacagctttgttgatgactcaattataatggataatggcgatgtaaacgggaggttacctgctgtgatcaagtttgaaatccagctttacaagagcagagacgagaagtatctgctggatatgcagagagttacggggcctcagctccttttcctggacttctgtgcagccttccttaccaaactgagggttctatag</cdnaseq>

Protein Sequence

<aaseq>MEGNARGGGHSEALKNYNLGRTLGIGSFGKVKIAEHKLTGHRVA IKILNRRQMRNMEMEEKAKREIKILRLFIHPHIIRLYEVIYTPTDIYVVMEYCKFGEL FDYIVEKGRLQEDEARRIFQQIISGVEYCHRNMVVHRDLKPENLLLDSKYNVKLADFG LSNVMHDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDE NIPNLFKKIKGGIYTLPSHLSALARDLIPRMLVVDPMKRITIREIREHQWFQIRLPRY LAVPPPDTAQQAKMIDEDTLQDVVNLGYEKDHVCESLRNRLQNEATVAYYLLLDNRFR ATSGYLGADYQESLERNLNRFASSESASSNTRHYLPGSSDPHASGLRPHYPVERKWAL GLQSRAQPREIMIEVLKALEDLNVCWKKNGQYNMKCRWSVGYPQATDMLDVNHSFVDD SIIMDNGDVNGRLPAVIKFEIQLYKSRDEKYLLDMQRVTGPQLLFLDFCAAFLTKLRV L</aaseq>

Gene Sequence

<dnaseqindica>1128..1311#1666..1850#2289..2471#2562..2693#2824..3009#3347..3436#3506..3589#3670..3810#3890..4120#4499..4612#ccgcctccgccgaccccgatccccatccatcccgccagcgaccgagcagggtcgccgtcgttcgccgtcgtcctgctgcttccgccgcatccatcccggtgagcagtcacatcctccgccaccgccgcctgcgccgatccccatccatccctccagcgagcagggcgggcgccgtcgttcctcctgctgcttccgcccgcatccatcctggtcactggtgagcacatcctccgccaccgccgcctgcgcctgcgccgatcctcatccatagcgcgagcgagcgttcctcctgctgcttccaccgcatccgttacgcacatcctcactttttttctcgaatttgcgttaaccctagcttctgttctagaaatttgcctcaaccttaatactaaaacagtttgatggttcccaaaaagtttcccatgttaagaaagcttggttacgcactaggatttcatgatttgtctatctctttgcaccaccaaaggcaccaagctgatatcctggttgcagcagcaccatgggtggagaagatgagtttcgcagtgttaaaaatgatctagtgatgggggttctgatggcaaaaggatgacttggggcattttggggtgaaggaaggctaggcacaaaccctcttgagaggacagtggtgggttatagctcatgtttaggtttgttctaagggatggtatttatcacacctggacaatacgattttggtaaacctttctagctagatttttggttctagaaagggaataagttgaatgttgtgaggatcattgatgatttggaccacttgtgccgttaactctcctagcgcataaagcttatgtttccctaaatgcaaccgaccagttagatgaagggttgttactatgaattgatatacataacttgtatttgaggtgaacatgttaactcgaacaattacatattgcatggtttctgtgacaaactgtatacatcatcctagtataatgaacaagcttagcacaacttgaatcttgggtcatgttttgccttggttcaaaggtttgcatcatgtcatcaatatgtcatataaagtgtaaaattgtttgtggaatgctagaccttagctattttcttttatattgccagtgaaaatggaaggaaatgctagaggcggtgggcattctgaggcactgaagaactacaatctaggaagaactttaggtattggttcatttggaaaagtgaagattgcagagcataagcttacagggcacagagttgctataaagatcctgaaccgtcgccaaatgagaaatatggaaatggaggagaaaggtaccttccttttataaagagaccactttaatcaatctattatcttctgtgttcatgatcatatgttacctgcttcctatagtggtctgatatgtgaactgtctccaaaattttgagctaatctaatagtcaagacaaaatttgtactgattctaggatacattttgtttgttaagaagaaagttcacttcctgctaatgcttgtgagtgtagtcattcttcctggtaaagaagaaattttatggttttaccttcttcgaatgcttttgagctggaaattctacaatctggaatttcatgcttgccaaatgctaaggcctgacttcattttttcttattgtttcttgtttacagcaaagagagaaatcaagatattgaggttgttcattcatccccatatcattcgcctttatgaggtcatatacactcctacggatatatatgttgtgatggagtactgcaagtttggagaactgtttgattacattgttgagaaaggcaggttgcaggaagatgaggctcgccgaatcttccagcaggtacttgaccttactcatttctttcacttgttaaatgtgctcttttagcatttatttccaacttcaatgcttgcttattttcatcattcaaaacctatggagcataagcatgccattcatattcgtcgtgtggaggttttgtgtgtggtgttcataattaattgactcaggttcacatgtaatcggcttgcttttagcttctaaccttatcattgaattttaaatttgtgggatggagtgatgtactaaatcaaacttttgattaattcctaagtcttcactgtgttggtgtaatcattggcatgtgattttaacctgaaatggagagagggacatacattattttatgggaacttagagtttttcattgctctgattttgttgaatacatatacattatttctcttaatatttagaaggtaaaattttatggaacagattatatctggggttgaatactgccacagaaacatggtggttcatcgtgatctgaagccagaaaacttgctactggattcaaagtataacgtaaagcttgctgactttggtttgagtaatgtcatgcatgatggccattttttaaagacaagctgcgggagtccgaattatgctgctccagaggtattttttttgtatcactgtgagactatatcttcttgctcctttacatgcaatattttttcttattatagtattatggtccctttgcaggtgatctctggtaaattatatgctggacccgaggttgatgtatggagctgtggagtgatcctttatgctctcctttgtggtactcttccatttgatgacgagaatatccccaacctattcaaaaagataaaggtgagataaatttatgtaggctaaccagaccttataaactcttatgctgactagatggtccttaaaatatctaagtttttattattattctgtatatttgagtatttgacctgcttgtttggtgttccagggtggtatatatactctcccaagtcatttatctgctctggccagggatttgatcccaaggatgcttgttgttgatccaatgaagagaatcacaattcgtgaaattcgagagcatcaatggtttcagattcgccttcctcgttacttagcagtgcctccaccagacacagcacagcaagccaaaatggtactttgtgtcacattcttaacgagttgttcattaatgtatcaaactttatatactaatataattttcttgagatatacttatagagtatgataaataatgttttgccaacataaaaccgtataaagcagtggtgaaaggcattttgaataacattttatgatatgaggcttgtggagtattttcttgctagtagtagtttatcttagcagaaatccttcatgagatgtaaaagaagcagataagttttcacttgcaatatcacttattacatgtttgattttttataattatcttgccactttgctaatatcttgatatatgaccttctttgaagattgatgaagatacccttcaagacgttgtaaacttgggttatgaaaaggaccatgtgtgtgaatctctgcgcaatagactgcaaaatgaggtatatgcaagcaaatgaactgttcatcctttttaattatcatattgctgattttagaccattttccaggcaactgttgcatattatttgctattggacaatcgattccgagctaccagtggctatctgggagcagactatcaagaatcattggttagttcaaatttacaccatttttgtctgacataatttgcaaaatgtttaattaactgtctgaccttacggttcattaggagaggaatcttaatcgctttgcttcatcagaatcagcaagttcaaatacaaggcattatctcccaggaagcagtgatcctcatgccagtggtttgcgcccacattatcctgttgaaagaaaatgggctcttggacttcaggtcttgcatgatgttctcttttactactacttttgtgacacactgaaatttgtgctgacgtatatcacttatccaacagtctcgagctcagcctcgcgagataatgattgaggtcctaaaggcacttgaagacttaaatgtctgctggaagaagaatggacagtacaacatgaagtgcagatggagcgttgggtatcctcaggccactgatatgttagatgtcaaccacagctttgttgatgactcaattataatggataatggcgatgtaaacgggaggttacctgctgtgatcaagtttgaaatccaggtgtgcaatttcaaattctagcactgctgacttaaaaagtttgttacagcaatatttttttttttctagatattcaactaaatattgttgtcatagttaaatccttggattaaagatcccattggaatgacaaaagaatgcctcaccttttaggttcaatcatgagttgatgcattgttgccaatatgtgttgtctgctcatgccattttgaaccagcaatttttaactttaaatactaaaaagtaccagttagccatatattatacttttagcctagtatagtatcattcgaatggtgtagctgttgtatttggtatgtattatatattttttgtatatctggctgtcgaattactgattccgtttcttttcttcagctttacaagagcagagacgagaagtatctgctggatatgcagagagttacggggcctcagctccttttcctggacttctgtgcagccttccttaccaaactgagggttctatagtaccccgtgttggcttcagtgaataaccaaacctagggttttatcatgtgcggtttttcactgcaataatgaataaaggacaccatgtaaataggcagctgtgactttcttcccggcccttagatagagaaggttgttgtttgagtgactagtgttatgttgagcaccaaaatgttggttgttacaggcttacatagtatatagatcttgataagctatctgggtgggcgaatgcttgatatctaattttttgcaggctgcagctatactgctggtgatgctgcagtacaagcttttctttttgctcctgcacacggttattatgcgtgtgcatggaaattttgctactgctagaaagaagctaggtaagaatatcagccccttgctgccgggttgtggtataaatgtagatgacagcaaatttagtgaaatatcaacaaatgtagtcgtatgatcatgctcatgtccccctatggagaatcgaggtatcct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0484600, RefSeq:Os08g0484600