Os08g0487900

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Revision as of 13:05, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0487900| Description = Esterase/lipase/thioesterase domain containing protein| Version = NM_001068639.1 GI:115477015 GeneID:4345894| Length...")
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Gene Name

Os08g0487900

Description

Esterase/lipase/thioesterase domain containing protein

Version

NM_001068639.1 GI:115477015 GeneID:4345894

Length

4776 bp

Definition

Oryza sativa Japonica Group Os08g0487900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24217934..24222709

Sequence Coding Region

24218094..24218184,24218371..24218858,24218949..24218996,24219088..24219324,24219615..24219651
,24222155..24222498

Expression

GEO Profiles:Os08g0487900

Genome Context

<gbrowseImage1> name=NC_008401:24217934..24222709 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24217934..24222709 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcggggtgacgtcctcggtggccgcgaagttcgcgtttttcccgcccgacccgccggcgtacggcgtggccgacgaggaggagccgccaccgccggggtcggctgctccggcggcggcggcgacggcgaggagggtgtctctgacgggggtcccgtggagggaaggtgtggaggcgaggcgggtgcggacgcggcggggcacggagatcatcgccgtgtacgtgcggtgccccaaggcgaggctcaccgtgctctactcccacggcaacgccgccgacatcgggaagatgtacgagctcttcgtcgagttcagcgcccgcctccatgtaaacctcatggggtatgattattctggttatggacggtcatcaggcaaggcaagtgaagctaataccttcgctgacatagaggctgcatacaaatgccttgtggaggtatatggcaccagggaagaagacattatcctgtacggtcagtctgtcggtagcggtccgactgtcgatttagctgctcagttacatcgtataagagcagtagttctgcacagccccatattgtctggcctgcgtgtcatgtattctgtgaagaaaacatactggtttgacatatacaagaacattgagaaaatgccccttgttaaatctcccgttttggtaattcatggcacaaatgatgatattgtcgattgttcccatgggaagcagctatgggagctgtgccaaaataagtatgaacctctatggatcgagggaggagaccactgtaacctgcagaccttcccagtgtacataaggcatctgaagaagttcatatcgacgatcgaaaatatgcctttggagaaagaatcatcatcaaccgagaatgagaagctgctagccgaaaccgaaacggcttccgatggttctgctctctctgacgctccatggacgacctcacagaggctagagccaccgaggaagagcacgaggcatgagctgccgcctcgattgagcaatgatcgtgtcgataaacgaaggcgaagcacgggccgcagagagaagccaagatccatcgtggagaagaaagaaaaatcaaggagaagtgttgacacatttgacaggacgagggatgaacacgatcagccagataaaccaagaaaaagcatcgacaggctcggagagatgatcagatcgatggggctctgcaatgttgattgcttcaaagagcctcctcgaagcatcgagactagccgagatcggtga</cdnaseq>

Protein Sequence

<aaseq>MGGVTSSVAAKFAFFPPDPPAYGVADEEEPPPPGSAAPAAAATA RRVSLTGVPWREGVEARRVRTRRGTEIIAVYVRCPKARLTVLYSHGNAADIGKMYELF VEFSARLHVNLMGYDYSGYGRSSGKASEANTFADIEAAYKCLVEVYGTREEDIILYGQ SVGSGPTVDLAAQLHRIRAVVLHSPILSGLRVMYSVKKTYWFDIYKNIEKMPLVKSPV LVIHGTNDDIVDCSHGKQLWELCQNKYEPLWIEGGDHCNLQTFPVYIRHLKKFISTIE NMPLEKESSSTENEKLLAETETASDGSALSDAPWTTSQRLEPPRKSTRHELPPRLSND RVDKRRRSTGRREKPRSIVEKKEKSRRSVDTFDRTRDEHDQPDKPRKSIDRLGEMIRS MGLCNVDCFKEPPRSIETSRDR</aaseq>

Gene Sequence

<dnaseqindica>4526..4616#3852..4339#3714..3761#3386..3622#3059..3095#212..555#attattacatttaggtccctacataagtttggtaattacaaatagcccctttagggaggagaccttggccgtggaggtttccataaaagccctccaaatagttccggctttgcacggacacgtccctccctctcccccagcctccgccgccgctcgccggccggaggaaccctctgatgccgctgccgccggtgtcgtgaggtggtaggatatgggcggggtgacgtcctcggtggccgcgaagttcgcgtttttcccgcccgacccgccggcgtacggcgtggccgacgaggaggagccgccaccgccggggtcggctgctccggcggcggcggcgacggcgaggagggtgtctctgacgggggtcccgtggagggaaggtgtggaggcgaggcgggtgcggacgcggcggggcacggagatcatcgccgtgtacgtgcggtgccccaaggcgaggctcaccgtgctctactcccacggcaacgccgccgacatcgggaagatgtacgagctcttcgtcgagttcagcgcccgcctccatgtaaacctcatggggtaagtgttcgtcagttcgtgtgattatttgttttggtagtttaactttcactgcttaggggagtaaacgttgctgctttggtggatgatgaattgatgattgatggctttgcttgaatagccgggccttggtttgatccgggtcaattgttttgccttccgttggtgtcttgatgaacttgctgccttgctggaggggaccagtatatattcatcgtttaattggctagctcgattttcatctctgtctatttgtttgagaccagtttatattcgtcgttaatgaagtcctgtgatcttttgaatatgtcttgttctaatgcttagaatgtcctgaatttagctgtagtacacagagcactgttcatagtattgcagttttggctttcaactagatttctacaatttggaatctggtagcacttcctccgtcaattgattgtcctgtcgagtatgcgttgtcaaggattgatttccacctgatcattgggattgagcattgattagtggttggcatctgttctatttgatctgaaatttcagtgggctcagttcatagagtttatattgatcagtgtattgtgttcacatgtactcaaattctttggatttgtaaactactcgctcttttggttttgctatttcgtgacacatgattaaacagctaaattagtcttacagagttacagttattgagggctgtacaaacagtttcctcgttgacattggggctaccctcctgtacccaaaaagaaaaaaagaactggtcgattgcgcatgaacctggtaataactagttgtaggtcctcattacacactgtgataggtacatcagaggaattttcatactggaaagtgggttgggatgagagcaagtgtgcccaaaaaaagacgtcagaacaatgaagtcactagtgggcttgtctacaaagggggagtattagagttatttttttttagaaaatggaaatgggttacatctccggcctctgcccgtaggcacatagccaaaaagttcagaaatgaacagaaaagagcttaaaaaaggcaagatggtacaaacccccaacttctaccgataatatgatctactaaaataatattttttaaaatcacgtagattctatcacgaaattctgtaggtactacgccatccaaactggagtaaaagttccttagctaccaattccaaacgtgtagcaccattgcgtatagtatcatgtttgttcctgtgaaagcatcatacatcaagagtgaagccaattgaaacacatgaagataacctgcatgatgttaggcatttttttatagttaaaaactatatcattacggcaacgccaaattgaccaacatagagcactagctccaaataaaatcatttttttgtgggtctaggcactccccttagccagttaccaaaaatatcttttgcattgtggggaggggggatattgaaggcaaagaagacacatcgccaagcaaaacgtgcaacatggcaatcaaagaaaagatgttggatggtctcttgtgtattacaaaaacaacatagcttgtttcccctccattttctctttatgaggttatctttcgtcaagattactttttttttttgaagaaaccacataaatactttgatttttagtgatacctttacctcccataagatcctcttatggattcttacattgaaattgatgatcgcgttatacatggatttgacattttgtattagagtcataatagtggttttccatcccctcctttttttcccccatttttccttttgttgttttttccccagctcgaccgatttttgtatctacaaccttcgatcttgatacaatgataagcaatacgcgtattcgcaaaaaaaaaaaaaagcttgaaaaatgcacaggtatagctttttcctgatctcacattcatcaagaaggccatgttttccctgatcccacagacccacactcggcaggagagccaagtacttagctttccaggttgcctacctcaattaattggcgtctggattcttcatgtaaagcaaatggtccaatggagctggtgcgcttcctgcaatagccatcgtgtttgagatgtttttgtccgattattgatcacaaaaatcattccatgtttcattttcaatgatgttcagaactaactgttgctgataaacaacgcaaaagattcttagtcaattttgttgtatcctgtcctgtagactttcattttctggactttgtgacgtttttttttataacagagacatctttgtcaatgtggaggatttcaattatgctagataggctattcgcattcaccttggtgcatctatttttaactgttttaaggataaattcctcatatcctactaaaattttacccgttaccttatttgccacttcatcgtagcaaatgaggaattggtgtgaattaatggttgtatttatgtacttagctcctcattttcctgcatttggaataatttcctcaatctttgcaggtatgattattctggttatggacggtcatcaggcaaggttaacaatgctctctattctttcctgaaattaacgctcttatctttgcctatataggagtgcaataaacctaacattactttcggaatgttttattagctgatgaattggaaacacttgaggccttctattttctttttacaagacaccgcaaaactgaaccccacttgattgttttcagttccacaattcctcttttcagtgagcttattccaataattgagttaaagactaaattggaaattgaaagccctattgaatcaaatcattctgtttccttccattctcaggcaagtgaagctaataccttcgctgacatagaggctgcatacaaatgccttgtggaggtatatggcaccagggaagaagacattatcctgtacggtcagtctgtcggtagcggtccgactgtcgatttagctgctcagttacatcgtataagagcagtagttctgcacagccccatattgtctggcctgcgtgtcatgtattctgtgaagaaaacatactggtttgacatatacaaggtttgcctcactgacgactgaactatcaagagatactaaaattaattcccatgcattgtccatgctaaccgaacacctgttttctttgcagaacattgagaaaatgccccttgttaaatctcccgttttggtaattcatgtaagcctgaatatatatgcatctctgtgcatttctcatgtacaactttatgtaatttaacttaatatatccttttcacttgtttttcagggcacaaatgatgatattgtcgattgttcccatgggaagcagctatgggagctgtgccaaaataagtatgaacctctatggatcgagggaggagaccactgtaacctgcagaccttcccagtgtacataaggcatctgaagaagttcatatcgacgatcgaaaatatgcctttggagaaagaatcatcatcaaccgagaatgagaagctgctagccgaaaccgaaacggcttccgatggttctgctctctctgacgctccatggacgacctcacagaggctagagccaccgaggaagagcacgaggcatgagctgccgcctcgattgagcaatgatcgtgtcgataaacgaaggcgaagcacgggccgcagagagaagccaagatccatcgtggagaagaaagaaaaatcaaggagaagtgttgacacatttgacaggacgagggatgaacacgatcagccagataaaccaagaaaaagcatcgacaggttggttctctgaacaattcttcacttccaccatcatcatacagagttgcagtaatcatgttacctaagtcatttttcctagtgaagaaactttggatgataaatgatattgccgcagatttgttgtgattaaaaagatgataaatactcttgccacaaactgacattggtgtaaatttttgacaggctcggagagatgatcagatcgatggggctctgcaatgttgattgcttcaaagagcctcctcgaagcatcgagactagccgagatcggtgatcgattcagagagtggcgttgtggctgtagctagtcttctctcccatgttagatgtcaacattggtctgtgtggtgtgtgctccggatgatgatcaaaatcataaaccatctatgaacagtaaagagaaatatagcacgtcatttttttgtttttttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0487900, RefSeq:Os08g0487900