Os08g0496400

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Revision as of 13:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0496400| Description = Conserved hypothetical protein| Version = NM_001068670.1 GI:115477077 GeneID:4345927| Length = 11012 bp| Definition...")
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Gene Name

Os08g0496400

Description

Conserved hypothetical protein

Version

NM_001068670.1 GI:115477077 GeneID:4345927

Length

11012 bp

Definition

Oryza sativa Japonica Group Os08g0496400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24591955..24602966

Sequence Coding Region

24592085..24592833,24602305..24602542,24602636..24602722

Expression

GEO Profiles:Os08g0496400

Genome Context

<gbrowseImage1> name=NC_008401:24591955..24602966 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24591955..24602966 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggagcagccgatcaagaacgccgtccacatcggggagacaccggtcaccggcgactgggcttgccctgacggcgggaacacggaggtcgccgcgtttcttgacaaggcgggggcggaggcggaggcggaggcggaggcggaggcggagtcttccgggagccatccgcttggcgagatcgccgggagcgcggggcacctgctgctgctgaagctgtggcagcgggaggagtcccgcctcggccgccgcgcgtgcgcgctcgaggcgctcatggacgcggcgcgccgcgacgcgttctacctctgcgcggccttcctcgccttccacggcctctccctcgcgctcctcttcgccgcctccgtgtctgcgtccgcgtccgccgcggtggtctcgccgcccgcggagcagcgcgccgcctgttgcagccttgcaggaggtggtgggtgccgtcgtccctgtcgctggtcgcgtccctcgcgctctcggcggccgtgcagctccgggtctgcgccgggagtgcgcacggcgacacgcgcgctggcgcggtgcgtgcaggagctccggatgaagggcgcggcgttcggcctgtccaaggagccgcagtacgggggtgacgagggccaagtgcgccagcgtcgagggcgccggtgcgtggggcccgctctggtggtgctaccagaacatcgtcgccgccgccaccatgtgctccgacaagttcatcttgtgctcgtaggccggaggctaagagttgaaatggcattgccatctgcttcaagcgaatccgatttcatgcatgtttcaaagaagacaaggtgctctccaaggttgaacaagggctcagcttcaccccgacttgacaaatctaacactgctcattccaacaagaagacatgtgcaataaaacccactgtacatcgcaatggtcctatgggaaaatcaaaatgcgcttgcaaaaaagagttgaaactagacaatgaaaatgcggactacatgaaagaatatcgtagggagctatgcaaaaggttgctgtaccattgcttcaacgacttacatccaaaacgtcgtttctaa</cdnaseq>

Protein Sequence

<aaseq>MEEQPIKNAVHIGETPVTGDWACPDGGNTEVAAFLDKAGAEAEA EAEAEAESSGSHPLGEIAGSAGHLLLLKLWQREESRLGRRACALEALMDAARRDAFYL CAAFLAFHGLSLALLFAASVSASASAAVVSPPAEQRAACCSLAGGGGCRRPCRWSRPS RSRRPCSSGSAPGVRTATRALARCVQELRMKGAAFGLSKEPQYGGDEGQVRQRRGRRC VGPALVVLPEHRRRRHHVLRQVHLVLVGRRLRVEMALPSASSESDFMHVSKKTRCSPR LNKGSASPRLDKSNTAHSNKKTCAIKPTVHRNGPMGKSKCACKKELKLDNENADYMKE YRRELCKRLLYHCFNDLHPKRRF</aaseq>

Gene Sequence

<dnaseqindica>131..879#10351..10588#10682..10768#atcgcttctccccttccatctcctcttctccccgatctcgctgcttccaatctcagatcaactcaaagctttccaaacgaatcctctgtttccttccagaaacatcgacttcttgggaggtttctgatcgatggaggagcagccgatcaagaacgccgtccacatcggggagacaccggtcaccggcgactgggcttgccctgacggcgggaacacggaggtcgccgcgtttcttgacaaggcgggggcggaggcggaggcggaggcggaggcggaggcggagtcttccgggagccatccgcttggcgagatcgccgggagcgcggggcacctgctgctgctgaagctgtggcagcgggaggagtcccgcctcggccgccgcgcgtgcgcgctcgaggcgctcatggacgcggcgcgccgcgacgcgttctacctctgcgcggccttcctcgccttccacggcctctccctcgcgctcctcttcgccgcctccgtgtctgcgtccgcgtccgccgcggtggtctcgccgcccgcggagcagcgcgccgcctgttgcagccttgcaggaggtggtgggtgccgtcgtccctgtcgctggtcgcgtccctcgcgctctcggcggccgtgcagctccgggtctgcgccgggagtgcgcacggcgacacgcgcgctggcgcggtgcgtgcaggagctccggatgaagggcgcggcgttcggcctgtccaaggagccgcagtacgggggtgacgagggccaagtgcgccagcgtcgagggcgccggtgcgtggggcccgctctggtggtgctaccagaacatcgtcgccgccgccaccatgtgctccgacaagttcatcttgtgctcgtaggccggaggctaaggtaagctgtgtctttcttcaaatctcgagaaagaaaaatgctatggcctagaagtaaaattatgtcagcaactatgagtaaaaaaaataccttcccctcgttaagcgtatttgcaggctggtctccgtaatcttttaaggaatccgctgttttgaatttctagttatatatactccaccgtctcataagaaataaatctagtacaagatatgaaatatctagatactatcgtactagtgtcacatcttgtattttttagacattaattcgtctctcggatttttttttggtaaaatctaaaccgagaatcttaaaccagagatagcagagtattctatgttgcttttaatacaaccaggacatatctttctttttctttttatagaattttctcttaaactatatattcgatctacaatcctattataccattgtgttcgttgcaattatatcttaaaacaagatcttacaggattatattataataaaataataattatgtttgtaaattacttttatatgtaacctagagtaacgtagagtactctcatgtatattaattttacttttatgtgtaacctagataacctagagtactctagtcttaacctagagtaacctaaatcagttttatgcaagttacttttatcagcgcgacgtgagatgcgcggtcggtggtagaaggtcggcgtggcacggaagcccacctgcgcaggaggccggagtggcatggaggcacagttggccacaggaggtccaacactaaagagacgtggccgacgactaggccccacggttgtgagtgaccggcgcagagagtaggtgctagtgtggcggcatgcggaggttggtcagcggggagcgtcggtgtagcagcagtggcggaggacgaaaaaaaatctaggtgtggccaatggacaagcgtgagttaatacacaacaataatagaccgaaaaacaaccttaattgcacaacacaacatcttaacaagactatgtccagcgtggcaacaataactcatgacaacccattatgtttgtaaccaagagtaaatagaagagtagacactaaagaataccgtaagtaataaattttcagcaatacatcacatataaaggcttgggaggatatatagagagaatcttctaaacaaagaagaacaagtgatgaaatgtgcaagcataccggtctgctcctgctgtctgctgcactactcttttgttgttgctgccctgccctgctgcttcctgcttgtcgtgccgcgtcgcacctgttgcccctgatagcccgctgccgcgcgtccgctttggcgtggatgcgttgcctagctgcaggccgcaactgctcactggcgccccttcgcggctccgccttactgctgctgctgccatccactcccgcgcccccgtgcacccacgccgtcgtcactcgtcaaacggctacatagttggggaatcgatggagatttggagatggccgtctggccgataggaaattttgaggtagggttcactagtcaacaaatcaacacccgacgtaacacaaaataagccccaaaaggacggcgccatgttgggggacggcgccatccactctggtgccccaaaaggactatttccggtttaagttttttcaggggtccatttataaaatatttttttcaaaaaaggaccaaaatgtaaaaatttcaggtagaaggcagggggtgggggttcgtgcgggcgacgcaaggtatgacgagcacctgaccttgcactctgccactgtgtagcagtgtctacgtgccagtggagaatggtcgatagtggagcatcggagcaatatgtatggataggcaggggcgggcatcgtttcccctcctaagggcgttgcgccttccccctcctcttgtgggctgacgggtaaaaacccagtcttgattctctctgagacctcgacggacggcggcagcaccagcaccgtcgcttttctccttggagacgtcgtcttggcagccccttgtcaaaacctcccaagtaactggtgcaagctcgctctagatgtttgtcctcttgtatcggcaccctagtttgcgcaagttgaccacattgcagggcctagggggaaagcagttccatcttctctctcaccctctcctcctcaatcccaaaaatgtggctagagcggagttttggtgttggttgttagggtgggttttgggcgttctcggttgtagttcctatgttggcctagcggtggtcggtcacacttagcggcagtaagtccgatgctagtcttctcccgggtctatgtgttggcattgttgatgcgtgggtggtggttatttttttctttgttttcctaattacgacctactagggttataatcttataattttttcctgctctatcaatgtgaattttgcaatgtctttggtgtaagacgttcagaaaaatatccccatcattttgaggttattcattagaagtctgggtcacttgatttggacatgaagaaagaacttcaacctaaatcctctgaaagagcctccaaaaattgagtcagtgtcagcagttctattaggctcctgatccccctcaacggcattttgatcagattcttagttttgatttttgaggaacctcgctgacacctgactctctccagagatatatctctgctgctacctagcacaacacttcctgatagtctccttgatcacgaagctgcctgcgaatcacccaaaggaagcatgtttgaagctccaagctgatcaccatcatcatgcccttaaactccttaggttttcccctcgctgccactgctcacttactacaacatcattacattcatattgcatttgtgacatgctcacttgcactagacaaatctctttgaagtgcatcattgggaggtgcaggaccagcactttcagaaccatctaacacgggccttgctgccagagtagtttgtgttatcatagttttcactttgttctgttggtgcttcttctcttgcctcaatttctgattgatgcaaatgttgctggttggattgatcattttctttagtgccaccagcaggtaccctgttcatcaagtttttcaggagtgggccacctcgactgagagaccagcagttcttcaatgccttcaggtactgcaagagtagctgattcagtgcgttggggtctgtcatctagccacatattaatacggtgtccacttcgaccacttcacaggctttggaaaattgcatccaaatgggaggaactattctcatgattccgatcagagaaggccaactcaacaaaattttctgaataaaggtaatttgcattagtgatacatgtgatgataccatctaggtagcactaacatgttagaaagtaaaaaataatcaggcagttatttattattaggcaaaattggttatatagcatcgaaagatcacgtttttaattttatggcaccgaaagatacctgttcactttaatagcacccaaaagttcaccccgttcccatttttaacacatccgtcaattctcgatcgttttccgtctgccttgatcgctattggcccagccatgcacacgatatgacgtttctacccctcattgccatgctatctgtacttgtgaggggtagaaacgtcatatccagaccaagttatttaaggtgtgaatcagcgaaacacattcttcattaacttgtaataaataaattttatacaacttgtagtaataaataaatgaacatatgtacacattaatattgtcgtgaagcaatttacaaaataagcataagttactcacattttcgtttaagcttcactacaagaagcattatggagcagctcctccaagttggcctcttgataacctcatttttctaacactttgacagctaacctcctaataaccttatttttcttaccctttaacattatgacttatctttctaacactttgacataaccttatttttcttaccctttgacattatgacttatctttctaacactttaacagctagccttctaataaccctatttttcttaccctttaacattatgacttatctcttatactggagggcacagagctcctccaagctggcatcctgataacgctattttttttacactagacggactgacaatgatagtctcttaagaaaatgggatgtggtcatcaccttcaccggcagggtcaatacgagtccatattaattttcttattactagagatagttcatcatgtttgaatattatatgaaagtaactatgaagtgcaaatagaagctagaaccaacaagattaaagctttgtagttatcttatcccacaatcatgaaatttataagtaggagaatccaatgatttcataacttagtgactcaaagaaatcctattcactacgaacatattcaaccagtcaaactcaagcccaagtctcgattcaattagatttactaaaactctattttttatatatatatacttttaaacttcaactctaacagcaaagttatcttatcccggaatcataagattcataagttggagaatccaatgatttcatgacttagtaactcaaataaatcatgttcactacgagcgtattcaacgattcaaactcatgcccaagtctcgatttaattggatgtactaacgccctatatttgttttatatacatttttgaacttagtgaattctaaaccctcgggaggatatcctctcattatttgcaagtcatacatataattatgaaaaattttcaaaaaaaaacttaataagaaattaatatatagtaaattactccaaaaacatgcaagttaaaatttaacttttatattttgtaacgaaaaaaataaattgaattatgactaattaacgcataataaaattgaagggatttagaggagaataattcatagaattaatcatataaaaactctttttttatgaaaaccttagaaaaataatttagcaaaaaaattttagtaaacttgaaaaactgattggctaggcagtcatagttattattaggatgggtaagtttattagtggaagctaaaaattcccacattaataaaaaaaataccatgagattaattaaaatttgaaaaataaaaaagtaaaaaatatattatattatattattaagaggataagccgagggaagacaaaagagttaagcatgcattgacaaagcaaatttctaacaactaaaaaacctaataatgattggatttgatttttccagtcttaataataggaatggtaatgggcaatcaaagaagtaggatagtagcatgtgacatttaaaatttataagccagacccaataatgattagtttagatcatttttaataatgataataaaaataagaggcaaccgtaaaatagtaagatggagttgtttgatgtaacttcttaaaggaacctagcaagacaatgaactctaggtttgatttttaaagataatatggtggaagctgtaacgaacagaaaaatatgtacgtcaggcaaagaaataaggagtgtgagtggtatgattttttttaaaaaaaactacaaaattaggatcctgctattgataaagtatgaattttcaaaatcctaaaacaataagatgactatttctcaattttttaaaagaaaatcatatgtaaaaatatttggatattttagtatgggtgctaactatataattatgtaggcccaccatgctaaattaaacacctttaccacttatttaatatgtatgttagtattaactgttgtcaaatgacaactgcgtctgtcgaatgacaggctttactctagtagaaaaggaaaaacaatatattaatattgaaaatcttcttagggataccctcaatacatgccccttggggcctatttataggcttagtgcagcctcatgtgccctagggtttactaagacaagggaatttatattgttacccttgtgatacggacatttatgagagtaattatagacaatttagtcttgggctttttcttgggccgtcaggagggcctccattagttgcttggccactctgggcctagagtccttcagctcggggggcgaaggtcttcagcttagcccagagcctctgggcctgtttggaggagctttagattctgagaagcagctgtttggtagccagcttctgagaatctggaaaagctctaaaacccaacttctccagcttctggcttcttagttcatttttcagaatctgtaactacatattctcagaagctgtggactgtttggggcagcttctagcagaaacagcttttgggaaaagctgcagctgggaaaagctcccccaaacagggcctctgtctttgtgactttcggcgttttgtcaccatgattcatcctagtggttgtagacttgttttgacaggctcagtcaaaggccctcgtaacatacatctaacattaactatcatagatgaaaaaaaatcagggaaccaacaaccaaaacataggactgcgaagtgcaataaggttggctatttttgttggtatctcgcttggctttgttcggtcctacacaaacaagagattaatgaaagatttatgttgtttttcacacgttttccaaactattgttttaaaaacttcatataaaataatagtgttaataaaaaaatttccttccctatccttgaaattttagtcgatcccttctatgtcctttagttttcttcaccccctggtatacctctgaattttgatttggatctgttacatacccttgtcatcaattgatcgttagttgaccgtttaataggtgtagaaaagtcaattttacccttcaatatttgaggaatatgtataactttgtggactatactgttggaagtatagaaatttgttgtgtgactataatattcataagtttgttgtacataaaaaaattaatatatattaaaatagaatgtgtagcatttttaaatgataaacatagttttggaaagcattcctatataatatatacaacatgaaaaaatatgttgaactaccataaaaaatgctatgtaaactcttttaataagtaaataagtattaatttttatgtcattatgtaaaagtaaacttttccatgaataatacattgtacaataaaatcatgaatataatagtcttttataaaaaaaattatacatttccaacaatatagctattctataatttccacatttcctcgaacaacaaggaatgcacagcgcaacttatcatcacgaacatccagaacctctcactggttccagggacatttataatgatttgccactcgctgtctatgacatgtggaccctcatatatctatggcatgtgggtctagtggcaaattatttagagccactcataagagtggcaaatagttaattattccctggttccacgtctgtctctccaagcagagcaacaactctagctccttaagactatgctccaagagacccatctcacaaacacacgagacatcatatcaagttccctagcagcaaaatctagtatcttcacaagctcccccccacccccccccccacacacacacaccacacacccaaagagtaaaattcttcgcctggctcctcactaaaaacaagctcccaacacgctgcaacctcctccaaaaatacattacacagtttgcctcctgcgagatatgcaaccaacctgtagaggacagaccatcttcctcaactgcacacttgcctcggctttctggtccctcatctaagtacctccaggtccggactccatggcaaacatcgacaggtctccctcttcaggggatctcccaagcaccctacacaggaattctctgctactgctgatggaggctctggattcacaggaatgaagtagagttccaggggattcacaacgtcttctcaagaactgcttggaggatgttggcctctggtcacatcggtttagctccaaccaccgttgcgttgtctcaatttggaaatcaatattcgcgagggcgctctgcctcctgtaatcttctgatttctttgcctttttttcaactccgcttggggagttggggttttatcttcttcaggttttcccgtgtagttctctgtttccttttgttccttgatcctccccttgtacaatgactttatttgaatcttattcaggtgcccaacctgaccgttaaaaaaatccacgttcccttcatgtctaagggcaaaatagtctttttcataggaattaaacattcatctaacgggatgagcatgaaaggggtcaaaactaaaattcagaggcatacaagggaggggacaagactcggagatatagaaggaattggttaaacctttaggggacatataaaggattttctctagttttaaacaaacaatgatattaatttattttttattaaaataattaatatttaattaatcagaaatgctacttaccggtataccgtttggggtcggtcctggacaggacaatttcttaaggatcagatacacaccctcgagaagcatctaagtcactcccaaacagacacctacagctcccaaactgtcgcgaccatggctgcggtggcggggtcggcggcggtggagcctgctcgcggctcctcctcttcagcggcgccggtgcgcacgaggttagttgtaccggtgagggagagtggcgtgagcgtggtggtggcggcgtctgtggtggagccagtggcggctgctgcggcggagctagtgcgcacgatacccctttcttttattcctcttttttaatcgatttcctgatttcatttttaacatctcttcatttttgcgttttcttgggttcgttgaatccccaacctatggatggggctcgtcataacacatccaaattgaaatcaaagtaagctaatactctcccttttttctgtgtgtttttgttcattcactgggggtgttcgtagtagaggtgagggatgtgtgtatgtgctgaatcatatgatacttgatatgatacttgcaacaaaatgttcgaattggaatagatcgctaaaaatgcttctagctgtatatagatgggaaggcaaatatttcttggagcaattttgtcgttatcaagtacacactgtcttgaaacagagaaatctccattcaactagtagcttactgcttaggatttttttaggtgaactgaagcgtaaacaaaattagagaaatctacatcagtcagttgatggcttctagttctgggcacgctttgcttgtcaattgttatcctctttgtcatagagggcaatgtgtggcgatagagatggcagatgcagctaagtcatagatacagatgatttggattttttttcctgttgatgtttgcagatctcagtggctggctgggtgttttctgttttaaaatgatttgatactttggttcaatcgaggatgaatcaccattgaaatgatattttctttgtcctttcacacatgtgcacagagttgaaatggcattgccatctgcttcaagcgaatccgatttcatgcatgtttcaaagaagacaaggtgctctccaaggttgaacaagggctcagcttcaccccgacttgacaaatctaacactgctcattccaacaagaagacatgtgcaataaaacccactgtacatcgcaatggtcctatgggaaaatcaaaatgcgcttgcaaaaaagagttgaaactagacaatgaaaatgcggtacttctttgaatttttagtttttacaaggtgattatgtttctttttttttcaagaaacgaattttttgcttcattcttgtcatccatgcaggactacatgaaagaatatcgtagggagctatgcaaaaggttgctgtaccattgcttcaacgacttacatccaaaacgtcgtttctaagcttcagaaccaatatgctcatttggttcaagcagtgttggatgtgtgcttagtccatttttgtagccccctccctccctctgccccaaccaacatatgtaacaagtcaagtttcagaactgtgtatgtggctactgtttttgtcttaaactggaaggttgtgaagggcacaacaatcaaatgacatgaactgtgtatgtggctactgttttcatgtacatatatgttggtaaagaagtgaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0496400, RefSeq:Os08g0496400