Os08g0500900

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Revision as of 13:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0500900| Description = Similar to Phosphoribosylglycinamide formyltransferase, chloroplast precursor (EC 2.1.2.2) (GART) (GAR transformylase)...")
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Gene Name

Os08g0500900

Description

Similar to Phosphoribosylglycinamide formyltransferase, chloroplast precursor (EC 2.1.2.2) (GART) (GAR transformylase) (5'-phosphoribosylglycinamide transformylase)

Version

NM_001068696.1 GI:115477129 GeneID:4345953

Length

2512 bp

Definition

Oryza sativa Japonica Group Os08g0500900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24819597..24822108

Sequence Coding Region

24819716..24820058,24820157..24820268,24820908..24821084,24821293..24821419,24821542..24821655

Expression

GEO Profiles:Os08g0500900

Genome Context

<gbrowseImage1> name=NC_008401:24819597..24822108 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24819597..24822108 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcggccgtcgcttccaccggctccggcctgcgctgctcgcccaatccgatgcctaagcagcagcacgagcggcgaagtgctcgggtgggcttcgtctcccagccgcgacctcgcgctgtccgctgcgagcggtcgccccatccggatgctcgagcctacgcggcggtggcggtgggggtggtggcgaaggggcgtgaggttgggggcgtcggggtggagagaaggaggctcgcggtgttcgtttccggtgggggatccaacttccgggcgatccacgacgccgctctgggtggggaggtgaatggtgatgtggttgcgttggttaccgataaaccaggctgtggaggagcggagcatgcgaggggtaatgggataccggtggttgtgttcccgaagtcgaagtctgctccagagggggtttctattgatgagttgttgaatgctctgagggaactcagggtagacttcattctacttgctggttacctgaaacttatacctgttgagctagttcaggaatatccaaaatccattttgaatattcacccttcactactcccagcatttggaggcaaaggttattatggtttgaaggtgcataaagcagtcatcgcatcaggggccaggtattcgggtccaactgtgcactttgtggatgagcactatgacacaggaaggactctagcccaaagggttgtacctgtgctagccaatgatactccagagcaattggctgcaagagtccttcatgaggaacatcaggtttatgttgaggcagttgctgccctatgtgatgaccgaattgtgtggagagaagatggtgttccacttattagaagtcatacaaaccctgacgagtacacttaa</cdnaseq>

Protein Sequence

<aaseq>MEAAVASTGSGLRCSPNPMPKQQHERRSARVGFVSQPRPRAVRC ERSPHPDARAYAAVAVGVVAKGREVGGVGVERRRLAVFVSGGGSNFRAIHDAALGGEV NGDVVALVTDKPGCGGAEHARGNGIPVVVFPKSKSAPEGVSIDELLNALRELRVDFIL LAGYLKLIPVELVQEYPKSILNIHPSLLPAFGGKGYYGLKVHKAVIASGARYSGPTVH FVDEHYDTGRTLAQRVVPVLANDTPEQLAARVLHEEHQVYVEAVAALCDDRIVWREDG VPLIRSHTNPDEYT</aaseq>

Gene Sequence

<dnaseqindica>120..462#561..672#1312..1488#1697..1823#1946..2059#gtagcggcagtaacacacactctctcccttccgatcgtcgccggcggccatcggcggcgctagggttcatcgggttacgcaggacaaactgcgtaggcgaggcgcgggggaatctcgcgatggaggcggccgtcgcttccaccggctccggcctgcgctgctcgcccaatccgatgcctaagcagcagcacgagcggcgaagtgctcgggtgggcttcgtctcccagccgcgacctcgcgctgtccgctgcgagcggtcgccccatccggatgctcgagcctacgcggcggtggcggtgggggtggtggcgaaggggcgtgaggttgggggcgtcggggtggagagaaggaggctcgcggtgttcgtttccggtgggggatccaacttccgggcgatccacgacgccgctctgggtggggaggtgaatggtgatgtggttgcgttggttaccgataaaccaggtgacgatgacgacgatgctttgcttccttgagctctttgggtggcgatgtgggtggaattgttgggatttattggggatttttgatgtggcttgcaggctgtggaggagcggagcatgcgaggggtaatgggataccggtggttgtgttcccgaagtcgaagtctgctccagagggggtttctattgatgagttgttgaatgctctgaggttgggttggttgctttgatctcaccttcaggctttgacattcgatgttctagctttagtagttcatctgttaggttttagataagtggatttgtagaaaaaaatggtcgatatgagatttttcacacttgcctttagtcttgtttgcaaaatgcatacatgatacattgctgtgtgctgataaaagttttctaatccatttatctgtcttatgtgtgcgagtagcgtttaaatgattttaaacgaagatgaattggtaactatttaaatgattttagtgtttacttattgaatgtgtgccactaccttgttttgccagatgaactttgatatcagttttatgctctgggttgacgtttagtccggaacctgttggagtgtgttcttcatcagttgtacagtgtgcccacacagtcagtcagattagcttccattttgttattgcctagctgatatactgtaatgtaccactgttgattttttcacgaatagccactgcatgttttacggtgtttgtagttcccacttcacttatatcctcttctacaagactggcttgcctactgcggatatttgttttggtcacttgcaataggtctcaagattctcaatctatccttaatttcttatgtgaaacagggaactcagggtagacttcattctacttgctggttacctgaaacttatacctgttgagctagttcaggaatatccaaaatccattttgaatattcacccttcactactcccagcatttggaggcaaaggttattatggtttgaaggtgcataaagcagtcatcgcatcaggggccaggtacttcacaatctctctatcacccatcacaagcaactgctgtgcagtttgcatatctactcaatgctatttccatggaaagcaatatcttggcaatcaatttgagctgatacctcacattgtagaagaaaattaaatcttgattattaacttaattggagaatgatctttgtttgtactctaactgttaagtgtcaactatacacaggtattcgggtccaactgtgcactttgtggatgagcactatgacacaggaaggactctagcccaaagggttgtacctgtgctagccaatgatactccagagcaattggctgcaagagtccttcatgaggtaacatatcttatgctccgctaagatttctttgatgatacatggctatgacatattcacttagctgcaactgaaattgatgatacacgttcttttgctcatttattaaccttatttttcaggaacatcaggtttatgttgaggcagttgctgccctatgtgatgaccgaattgtgtggagagaagatggtgttccacttattagaagtcatacaaaccctgacgagtacacttaactcatagtactacctcaaggattgctgcgcagcatgcacgtaatgaggcttctagaatgcctgcattgttttttcccaaggcatgaaggtcactcgtactaattgagataaataacttgtctggtgctgttactgaaacaaaatatcttgtgccgttcaactcaccgcttgttgtgtgactttgctccaacaatgacatgcgcataggccgatacttagaaacctcagtgtttgctggtgtgacttgcggaagcatactggttgctgcatgcaccaagttttttttttttttgtgtgtgtgacagagcggggtggggggggggggagggggtccattgtaccctttagtcttggaattgttgtaatcggctgaagtcaagtcgatcaaagagggagtaaaaactggtcagatcacacaggttttcaatgtgtaatctgattaccatgcttccc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0500900, RefSeq:Os08g0500900