Os08g0504000

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Revision as of 13:07, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0504000| Description = Similar to WIP5 protein| Version = NM_001188717.1 GI:297726564 GeneID:9271702| Length = 3613 bp| Definition = Oryza...")
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Gene Name

Os08g0504000

Description

Similar to WIP5 protein

Version

NM_001188717.1 GI:297726564 GeneID:9271702

Length

3613 bp

Definition

Oryza sativa Japonica Group Os08g0504000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24993304..24996916

Sequence Coding Region

24996105..24996575

Expression

GEO Profiles:Os08g0504000

Genome Context

<gbrowseImage1> name=NC_008401:24993304..24996916 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24993304..24996916 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagatgcatatgtgggggcatgggtcgcagtacaggaaggggccggagtcgctgcgcggggtgcagccgacggcgatgctgcggctgccgtgctactgctgcgcggcggggtgccggaacaacatcgaccacccgcgggcgcggccgctcaaggacttccgcacgctgcagacgcactacaagcgcaagcacggcctcaagcccttcctctgccgcaagtgcggcaaggccttcgccgtcaagggcgactggcgcacccacgagaagaactgcggcaagctctggtactgcctctgcggctccgagttcaagcacaagcgctccctcaaggaccacgcccgcgccttcggccacgcccacaccgccctcgacgccgacgacgacgacggcgccgtctccgacgccgacgccgtcgtcagaccttcgtcctccatggctgcctcctccctgcagccgccgccgcgctag</cdnaseq>

Protein Sequence

<aaseq>MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCYCCAAGCRNNID HPRARPLKDFRTLQTHYKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCGKLWYCLCGS EFKHKRSLKDHARAFGHAHTALDADDDDGAVSDADAVVRPSSSMAASSLQPPPR</aaseq>

Gene Sequence

<dnaseqindica>2802..3272#atctctctccctgccctacctccatctctcactataactaccccttgccaaccatggcagctcactcccaatccagcaagcagcagtagtagtagctagccaagaacagaagcaaaagcagcaagcaagcaagagcagctgcagaagcagcagtagaaactgtagaagaagcagcagcagcagcagcagtagagatcagcttgagaagtgaagtgaagcagccaagcttcctcatggaagacccctacactagcttcttcaagaacccttactactactactgcacctcggctagctccttccccaccgcgcccgccgccgccgccgccgccgctcacctccctccgccgctgccgccgccttacgctgccctgtatcctaccgccggtggcgtcggcgtcggcgtcggcgcgcatcatcatcatcagtacccgccggccgcattcttccacccgccgccggtgcaccagcagcatcaggcgccgccgtcgccgccgctgcgggaagcgctgccgctgctgtccctgtcgcccacgccggcgcgccgcggcggcgtcgtcgacgcagcggctgactcggactccgacgacgacgacgacggcgactgctgctaccaccacctgcaggatcaggagggggcggcggccgggtcgacggccacccccgccgccgccgccgcgcgcgcgccgctcttcgccgacctcaactgcatccccacctgctgcggcgacgacaacgacggcggcgacccgatggacgtggaggtcgccgggacaacggcggacatcgacgccgcggtcgccctgcgcatcggcctgcctgccggcggcacggaggccgatctcctctccgggctcaccggcgccggcgtcgaacacgaggaggaggaggaggactgcaaggtggacggcggcggcagcggcggcgacgacgaggtggtgccgctagggttctcgtcgacgccgatcgggaagctgaacaaagggcagtactggattccgacgccatcgcagatcctcatcggcccaacccagttctcctgccctgtctgcttcaaaaccttcaacagatacaataacatgcaggtcagagctaataatcatcttaattacattcttattagctactcatttgaatatatgattgatcttatattgctgtttaattcttgttcttggacacacaatatgattgtgataactttgcaggtcagagctaataatcatcttaatcacattcttattatagctagtactactagctagaaacatctcatctgaataattgatcttaattcttgttcttggacacacaatatgattgtgataactttgcaaggattggttggtcatgattttgttgattgcaattaaagtagagaggaggtgggtagcaagctgctagctttggagagcagatgcatgccatgaaatagacttgagctcacaggagcatgcaacagtagtggtgtctgccttttgtgtgattgaactagactggcatgccaggagcagctatagctagaggtagagctagagcttaccatgcatgcaatctttatgcttttctctccttgagttgtttggcttttggagatgcatatgagtggccaagctgcagtggagatcccagtgaagattttatctttgcttctctcactgtcttagtacacttccactgatctcatcagattacatatactcctttctggaggtgtagtttctacttgtactagtactagtactacacttgctatcatgcacctagtagtcctgaatcctgatcactcaggactcagggctcaaataagatttgggtagatatatgcatgggggttgtttcaggacaggctttcatggtttggaaagcataagattatggagctgctgctgctgctgaacacatctcccaagaacagcaagagagatctgcagtgtgcttcctgtaggcatgcagccaacacagtgccactctggctgcactctttaaaggaacaacaccaacacattgaacacaacaaacacacaagccaagctagcaaagggggcatagctgcctggagtagtagagccctcactttcaaaagatcacacactagctagcagcagctgcactaattgacatatgcatgcagcagcttcagttcgagtagttctctcaggtttgccgcagctgaatattgctagcaatgcaactatagctgcagtggtgcattaaatacctgcaatatacttactcgaatcatatgctgatgaacattcatttgaaatacatcacctcctttttgttccttttgtttatactagtaggagtaaatgtgaaataatggtgctaaatttcctgaaacaaaacgaacataaacaaaaaggtgatgcatttgaaatgaatgctcatcagcatatgattttagataaagtaagaaacattgagcatgcaatgatacgatcgctagggatctaattaagtgtgttctcatacctggagaggacgatcgacatcccatatatatacatgaagctttataaaaaaaaacttctgaatttgtttttattacattgtatatactactccctctgtcccataatataagggattttggatagatgtgacacattataatgaatctggatagacggaccgcctagatttattttactagatcaatatgtcaaatccacccaaaaatcccttatattatgggacatagggagtattgatttggtgaatatatacattttgatgtcgatcagaaaaaaaaacgagatggaaattaatgaaacttgttgaaaaaaaatgcatggatgcagatgcatatgtgggggcatgggtcgcagtacaggaaggggccggagtcgctgcgcggggtgcagccgacggcgatgctgcggctgccgtgctactgctgcgcggcggggtgccggaacaacatcgaccacccgcgggcgcggccgctcaaggacttccgcacgctgcagacgcactacaagcgcaagcacggcctcaagcccttcctctgccgcaagtgcggcaaggccttcgccgtcaagggcgactggcgcacccacgagaagaactgcggcaagctctggtactgcctctgcggctccgagttcaagcacaagcgctccctcaaggaccacgcccgcgccttcggccacgcccacaccgccctcgacgccgacgacgacgacggcgccgtctccgacgccgacgccgtcgtcagaccttcgtcctccatggctgcctcctccctgcagccgccgccgcgctagctagctactagcatacatatacacccctccatccaaaaaaagttcaatcctgtccaggttcatagctagagtttatgatcaccctatcgatctattagtgatactactatcacttattagttgatgttgctgtttttgtttttgtttgctacgttaattagggttatgggaaaatgtaaggtgtgatctcgtgctcttagtttttcttgatcaatatagcagctagcagctggctggttgtttattagcatgattatatagcaccgatcgatcatatgtatgatgatcaacttattaattacgtgttggtgatgattttgatgtaatcatgccgttctgct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0504000, RefSeq:Os08g0504000