Os08g0505200

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Revision as of 13:07, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0505200| Description = contains InterPro domain(s): IPR010978| Version = NM_001068718.1 GI:115477173 GeneID:4345975| Length = 3551 bp| Def...")
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Gene Name

Os08g0505200

Description

contains InterPro domain(s): IPR010978

Version

NM_001068718.1 GI:115477173 GeneID:4345975

Length

3551 bp

Definition

Oryza sativa Japonica Group Os08g0505200, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25074880..25078430

Sequence Coding Region

25075289..25076031,25076121..25076415,25076589..25076795,25076897..25077070,25077246..25077434
,25077537..25077650,25077764..25078105

Expression

GEO Profiles:Os08g0505200

Genome Context

<gbrowseImage1> name=NC_008401:25074880..25078430 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:25074880..25078430 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtgccaaagataatggggaagtaagagacgagaagggggttggatcagattatgaaccggccagagtttcaggagtttccaagaaactcatgagaaaggatacaagagaaaatagccctcgcatggcaaaaagcagtggcagccgtcaagttcagaacaagctgcaacataaagcttcaaacaacattcagagtagatctccaaaacccaggaaagttgttaacgctgcgaaatctgctgaagttagaaggtcagatactgtaagagttccttctcgtgctccatcagagctttctgaggaaacagacgatatagttagcgaggctggaaccgttgatgatagtaaaggcaatgaagaggccaaggagattgatgtgctagatgaagctccacattgtgatcagagcactggtactgacgatgaaattcctgaaattgaagaaaagatagttgatgatgagaaaccagttgtgtatcaaaggaatgaggagttacaatcaaagattgacaagttggaacaagaacttcgtgaagttgctgcgctcgaagtttccctctactctgtattgcctgagcacggaagttcggcacataagctgcataccccagctcggcgtctttctaggatgtacattcatgcatcaaagttttggtcctcagataagatagcttcggtggcaaaaagcactgtgtctggcctagtgcttgttgcgaaatcatgcagtaacgatgcatcaagattgacattctggctgtccaatacagttgtgctaagggagataattgcacaaactattggtatctcatgccaatcgtcttcaaccattacagccatcaacatgaatggtagtgcaaaaagtcttgatgggagatcgatgccaatgctatggacaaatagctccagtggcaaacaaaccaaatttactggcatgcaggtaccggatgattggcatgaaacaagtacacttttggctgcattggagaagattgaatcatggatattttctcggatagtagaaacagtgtggtggcaggcactaactcctcacatgcaaactccggtggaaggatcgtcaaccccaaagactgggagagtgttaggtccttctttgggtgatcagcagcaaggcaccttttctgttaacctgtggaaggctgcatttcacgatgcattcaacagaatatgccccctccgtgctggtggacatgaatgtggctgtttaccagtattggcaaaattggtgatggagcaatgtgtaggccgtttagatgttgcaatgtttaatgcaatccttcgtgaatcggctagtgagatacccactgatcctatatctgacccaattgttgacccaaaagtcctgccgattccagctggtgatctaagctttgggtcaggcgctcagctgaagaattctatcggaaattggtcgagatggttaacagataactttggaatcgacgctgatgactcagaggaggatggtaccgacacaggaagtgaaagaagtgcagctgaatcaaagtcttttcaactgcttaatgaattgagtgatctccttatgctcccaaaggacatgcttatagaaaaatctatcaggaaagagatctgcccttcgattggcctcccgttagtaacaagaatcctatgcaacttcactcctgatgagttctgtcctgatcctgttcctagcatagtcctagaggagctgaattctgagagtttgctggagcgatgcaccgacaaaagtgcaaccagcgcatttccatgtatcgctgctcctgttgtgtaccgccctccatccctactggatgtggcagagaaagtggcggacactggtggcaatgcaaagctagacaggagagcgtcaatggtccagaggagaggatacaccagtgatgatgatctggatgacctggattctcccctcgcatcccttatcgacaaaagcgctccgcctttgctgtctaaaggtagcgcgcattttactgctcaaagaggagtttccatggagaatgccagatacacattcctgagagaggtatggttggagaggcagtga</cdnaseq>

Protein Sequence

<aaseq>MGAKDNGEVRDEKGVGSDYEPARVSGVSKKLMRKDTRENSPRMA KSSGSRQVQNKLQHKASNNIQSRSPKPRKVVNAAKSAEVRRSDTVRVPSRAPSELSEE TDDIVSEAGTVDDSKGNEEAKEIDVLDEAPHCDQSTGTDDEIPEIEEKIVDDEKPVVY QRNEELQSKIDKLEQELREVAALEVSLYSVLPEHGSSAHKLHTPARRLSRMYIHASKF WSSDKIASVAKSTVSGLVLVAKSCSNDASRLTFWLSNTVVLREIIAQTIGISCQSSST ITAINMNGSAKSLDGRSMPMLWTNSSSGKQTKFTGMQVPDDWHETSTLLAALEKIESW IFSRIVETVWWQALTPHMQTPVEGSSTPKTGRVLGPSLGDQQQGTFSVNLWKAAFHDA FNRICPLRAGGHECGCLPVLAKLVMEQCVGRLDVAMFNAILRESASEIPTDPISDPIV DPKVLPIPAGDLSFGSGAQLKNSIGNWSRWLTDNFGIDADDSEEDGTDTGSERSAAES KSFQLLNELSDLLMLPKDMLIEKSIRKEICPSIGLPLVTRILCNFTPDEFCPDPVPSI VLEELNSESLLERCTDKSATSAFPCIAAPVVYRPPSLLDVAEKVADTGGNAKLDRRAS MVQRRGYTSDDDLDDLDSPLASLIDKSAPPLLSKGSAHFTAQRGVSMENARYTFLREV WLERQ</aaseq>

Gene Sequence

<dnaseqindica>410..1152#1242..1536#1710..1916#2018..2191#2367..2555#2658..2771#2885..3226#agttgcttttgctgatgattggtttcttggccaatggtttggttgttgttttttttaaaaaaaactttcagggggctctgatttcttgtttcagttaaccgcccatacgaaggagtctactggcaaaattttgctctctattttttttttctgcggaatgatttcattttgatgtatgatagcacttcatagtatgataagtctggattttgattcactgcataatcttctgaatcataaagttggtgttttcctcggtgtcgatagtgctcgatcttaattgggcatgctttggttttaattagttgatcgcctagcaaaagttgctacaaattataatgattaatcatttggactttattatttttccaggtaccacaattctagcagagattataaatattcagaaatgggtgccaaagataatggggaagtaagagacgagaagggggttggatcagattatgaaccggccagagtttcaggagtttccaagaaactcatgagaaaggatacaagagaaaatagccctcgcatggcaaaaagcagtggcagccgtcaagttcagaacaagctgcaacataaagcttcaaacaacattcagagtagatctccaaaacccaggaaagttgttaacgctgcgaaatctgctgaagttagaaggtcagatactgtaagagttccttctcgtgctccatcagagctttctgaggaaacagacgatatagttagcgaggctggaaccgttgatgatagtaaaggcaatgaagaggccaaggagattgatgtgctagatgaagctccacattgtgatcagagcactggtactgacgatgaaattcctgaaattgaagaaaagatagttgatgatgagaaaccagttgtgtatcaaaggaatgaggagttacaatcaaagattgacaagttggaacaagaacttcgtgaagttgctgcgctcgaagtttccctctactctgtattgcctgagcacggaagttcggcacataagctgcataccccagctcggcgtctttctaggatgtacattcatgcatcaaagttttggtcctcagataagatagcttcggtggcaaaaagcactgtgtctggcctagtgcttgttgcgaaatcatgcagtaacgatgcatcaaggtaaaatatggccacgatatgcctctattttaccttgaaaataggtcataaccatcaatttccttgaattaaactctgctctcttgtagattgacattctggctgtccaatacagttgtgctaagggagataattgcacaaactattggtatctcatgccaatcgtcttcaaccattacagccatcaacatgaatggtagtgcaaaaagtcttgatgggagatcgatgccaatgctatggacaaatagctccagtggcaaacaaaccaaatttactggcatgcaggtaccggatgattggcatgaaacaagtacacttttggctgcattggagaagattgaatcatggatattttctcggatagtagaaacagtgtggtggcaggtaaaagttagactatattcttgctgacacatgcatgaaactgagcatcccttgctccaaactggatgttctagttgagtgtttcacaaagaaatagctcgcaatgatattgttctgtgattatatctgatttctccatgttgtcaattttctgaagaacgtttgttgttcaggcactaactcctcacatgcaaactccggtggaaggatcgtcaaccccaaagactgggagagtgttaggtccttctttgggtgatcagcagcaaggcaccttttctgttaacctgtggaaggctgcatttcacgatgcattcaacagaatatgccccctccgtgctggtggacatgaatgtggctgtttaccagtattggcaaaattggtattctttgacatccttagcttgacaaaaagaaaagaaaaacatttcttactgaaaatattaatataaatgttatattcatgtgttttgtgaattatcaggtgatggagcaatgtgtaggccgtttagatgttgcaatgtttaatgcaatccttcgtgaatcggctagtgagatacccactgatcctatatctgacccaattgttgacccaaaagtcctgccgattccagctggtgatctaagctttgggtcaggcgctcagctgaagaattctgtatgtacttgattcagtaccttttaagtgctttctcagttttcctttatttactcacaatgatttatgcatgggaagctaaacttccgtgcataaactctagaatgcaaacgtgttgttttcttaccattgcacttaaaatagcaaatttatatgaaataaaatgcatatgcagatcggaaattggtcgagatggttaacagataactttggaatcgacgctgatgactcagaggaggatggtaccgacacaggaagtgaaagaagtgcagctgaatcaaagtcttttcaactgcttaatgaattgagtgatctccttatgctcccaaaggacatgcttatagaaaaatctatcaggaaagaggttagtgctcatgcatagttcctgatgaataattgtactgttatctatctacctatctagcaatcagtttagctgtgtttaagactttgacctctttgtcagatctgcccttcgattggcctcccgttagtaacaagaatcctatgcaacttcactcctgatgagttctgtcctgatcctgttcctagcatagtcctagaggagctgaattctgaggtgttgtttctgtcttgaggaaactttgtagtctagccttacaaaacttgttcccacaacgaagatgcatacagtgcaactttgtagttaacatgatacttgatgttatgcagagtttgctggagcgatgcaccgacaaaagtgcaaccagcgcatttccatgtatcgctgctcctgttgtgtaccgccctccatccctactggatgtggcagagaaagtggcggacactggtggcaatgcaaagctagacaggagagcgtcaatggtccagaggagaggatacaccagtgatgatgatctggatgacctggattctcccctcgcatcccttatcgacaaaagcgctccgcctttgctgtctaaaggtagcgcgcattttactgctcaaagaggagtttccatggagaatgccagatacacattcctgagagaggtatggttggagaggcagtgattggtgaacctgtacaaatccagaatctcttctttagctaccttaaaaagggttgggaaggaaaacctgctgaggtgaaacctttgagagaagttgctcacttgcagagctagttaactaaacaagaatggctactgtcaaaatgcaaacaatttcgtgtacattcatatacatatgttgttcgtttgtagtataatagaagcaagccagaaatgaactttctctgttgtctgttgaaactaaagaatgtgatgtcccatgggaaacgaaaagatgttctacctggacaacattatgtaggccagattctgatgcatgatttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0505200, RefSeq:Os08g0505200

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os08g0505200&oldid=8008"