Os08g0508500

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Revision as of 13:07, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0508500| Description = Conserved hypothetical protein| Version = NM_001188725.1 GI:297726580 GeneID:9269734| Length = 8621 bp| Definition ...")
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Gene Name

Os08g0508500

Description

Conserved hypothetical protein

Version

NM_001188725.1 GI:297726580 GeneID:9269734

Length

8621 bp

Definition

Oryza sativa Japonica Group Os08g0508500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25282033..25290653

Sequence Coding Region

25282033..25282378,25282898..25284275,25285471..25285549,25285801..25285893,25286008..25286139
,25286825..25286968,25287056..25287151,25288188..25288397,25290162..25290653

Expression

GEO Profiles:Os08g0508500

Genome Context

<gbrowseImage1> name=NC_008401:25282033..25290653 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:25282033..25290653 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaccggcggcgagccgcgggcggcggcggcggcggagggcggggagaagcgggcggcgctgctgagggagatcacggaggaaggcgggttcgcgttcgtggcgtcggcggagaaggcggcggccgacggggacctccgcgcggcggaggcggcgcgggagatggcgtgggagcagctgcacgcgtgcccgcggagcgaggtcgggcgcgcgtggagggacgcctacgcgctcgcgtgcctccacgtggccgcgctccgcgttgccggcggcggcggcgacggccgacgcgccgcgctccgggcgctcgacatgggcctcatcatgggtggcgacctcctccgcgccgagctggaggaagccatcgcgcgggtggtcgccgaccgtagccgcggctgcggtggcggtggtggcgacggcgccggagagaacggagctgatgttgagaaatggatggaaggcctaaccaggaaacgagacctcgccgatgtgctcaaagttctgccagtgaagtccttatcttgtaagcaaatcgagaggcgatcatgcatttctttggaggcatttatacgtgattactttttatgtgagtcccctgttatactcagtggctacatcgatcactggcctgcacggacaaagtggaaggacataagatacctagagaggattgcaggagatcggactgttcctgttgaggagcttatcacattttctcagtttcttgagatgatgtggtcatctgattgttctgcaaacttgacatatctagcgcagcatccactgtttgaccagataaaagagctccgtgaagacataatggttcctgaatattgtaacgctggtggtggggaactccaaaagctcaatgcctggtttggccctgaagggacggttacaccattgcatcatgacctgtatcataacctttttgctcagggaaaccctcagatactggtattcatccaacgcgtagatcacccactctgttttgagatcactggaatgtttgcactgcaccaaagctcatattccgataaaaggttgtggccatatccaaaatggctacatgtcttgggcaggaaatattttagactctattctgcttccatctccaatgacctttaccctcacagagaaactatgctaagcaatattagtcaggtagatcttgacaacattaacgtaaatgagttcccgaggacaggagacgttgaattcatggacggcatattggaggaaggggcacttggtgctcaaggttctactactatgtcatccagcttcgtcgacaacagcgtcaacaccaacctcaaccaagtattccctgcttcaacaatgctggtgtggactcaagtcgacgaaatcgtcttcccggtttacaccacaataccgatctcagccggtccatcaatgactggaaacaagaacgcagtggctacagaccaagacgactccttgtcgaaagatcctcccgccgaggcagagaacggaacatcgacgacatccgagctcgagaaggattctaatgcggccaaaccttgttgtcccgacatgaaccgtgagccgatgaagatgacttccgaagcgacaaagtcctggtgtcctatccacaaaaccaggaaacacactttgcaagcctgctgggtttttctcaacgtccgcgctgaaattcgcgcctgcaaagagcgtggaattcagcgtatttctccaactcgtgatgtctattatcctattcacaagacaaagaatcacgacctctccagctgcaaggtctttctcagcgccatgaaagcgccatctcctaaagtccaacagtcacacatccccatcagggataaagacaaggaacaaggagcgatgccaacctcagatcgatttgttggggtaatcgatatcgatccccacgaaccatcagtcttgcaccttctcgtagactatggatcatcgagaacgagcgcgccgcgggaggtattggctatcgatgatgtcggcacgtcagcgcgcaccaatgcagaagcggagaatcaattggccactccagcccagcacatcagagccgtcaacgctatactgaggaaaaccccctacgatcctgttctgaacgatgatctcgcacgttggacagaacgactacgggaatcagtgaccaacctcagcaacgcgttcggagaggccgctgccgcagcgcacccggagcagccaccaactggcgatgccaatggtgaagaccctgaacggagggaatcgcctcatcgagctacccctccacctggcggcactggcgatctccgagatcacctcaacggccgccgagaggcacgacgcacacgagacaacgagaatcgttcccggcgtcatgtctcttcacggcgccatgataacgaagatcgaggagaccgctcaaacgaagaccgagactatgataaccgccaccaccgccacgatcacaatgatcgcgaacggcgggtgccaggtgatactagtcgaggacgtcgccataatgacgacgatgatggagaccgtcgccgagacaacagcgggagacaacgacaggactctcgagatccaggccgacatcctcgtaaccgtacgccggaaccgagcgacccatcatcatcagatcgctatactactcaggaattggcgacaagacgcatcacaactactcagagattgttcgaaattgttgagcgatgcgcccacgcagatgatgcgctaagacgcaagaatgataagccgaagaccgggggagagaagaaaccagccacggacgcacctgagtcaagcaagaagaaaaatcgcaaaaataggaaaaggaaagctcaagcggaagacctcgcagcagaatacgcgaaccctcccaagcgcccagacccacagagtagcgacacaaagaaagcatggtgccccatacataagatggacagacattctttggaagattgccttgttttcaaaaaataa</cdnaseq>

Protein Sequence

<aaseq>MATGGEPRAAAAAEGGEKRAALLREITEEGGFAFVASAEKAAAD GDLRAAEAAREMAWEQLHACPRSEVGRAWRDAYALACLHVAALRVAGGGGDGRRAALR ALDMGLIMGGDLLRAELEEAIARVVADRSRGCGGGGGDGAGENGADVEKWMEGLTRKR DLADVLKVLPVKSLSCKQIERRSCISLEAFIRDYFLCESPVILSGYIDHWPARTKWKD IRYLERIAGDRTVPVEELITFSQFLEMMWSSDCSANLTYLAQHPLFDQIKELREDIMV PEYCNAGGGELQKLNAWFGPEGTVTPLHHDLYHNLFAQGNPQILVFIQRVDHPLCFEI TGMFALHQSSYSDKRLWPYPKWLHVLGRKYFRLYSASISNDLYPHRETMLSNISQVDL DNINVNEFPRTGDVEFMDGILEEGALGAQGSTTMSSSFVDNSVNTNLNQVFPASTMLV WTQVDEIVFPVYTTIPISAGPSMTGNKNAVATDQDDSLSKDPPAEAENGTSTTSELEK DSNAAKPCCPDMNREPMKMTSEATKSWCPIHKTRKHTLQACWVFLNVRAEIRACKERG IQRISPTRDVYYPIHKTKNHDLSSCKVFLSAMKAPSPKVQQSHIPIRDKDKEQGAMPT SDRFVGVIDIDPHEPSVLHLLVDYGSSRTSAPREVLAIDDVGTSARTNAEAENQLATP AQHIRAVNAILRKTPYDPVLNDDLARWTERLRESVTNLSNAFGEAAAAAHPEQPPTGD ANGEDPERRESPHRATPPPGGTGDLRDHLNGRREARRTRDNENRSRRHVSSRRHDNED RGDRSNEDRDYDNRHHRHDHNDRERRVPGDTSRGRRHNDDDDGDRRRDNSGRQRQDSR DPGRHPRNRTPEPSDPSSSDRYTTQELATRRITTTQRLFEIVERCAHADDALRRKNDK PKTGGEKKPATDAPESSKKKNRKNRKRKAQAEDLAAEYANPPKRPDPQSSDTKKAWCP IHKMDRHSLEDCLVFKK</aaseq>

Gene Sequence

<dnaseqindica>8276..8621#6379..7756#5105..5183#4761..4853#4515..4646#3686..3829#3503..3598#2257..2466#1..492#atggccaccggcggcgagccgcgggcggcggcggcggcggagggcggggagaagcgggcggcgctgctgagggagatcacggaggaaggcgggttcgcgttcgtggcgtcggcggagaaggcggcggccgacggggacctccgcgcggcggaggcggcgcgggagatggcgtgggagcagctgcacgcgtgcccgcggagcgaggtcgggcgcgcgtggagggacgcctacgcgctcgcgtgcctccacgtggccgcgctccgcgttgccggcggcggcggcgacggccgacgcgccgcgctccgggcgctcgacatgggcctcatcatgggtggcgacctcctccgcgccgagctggaggaagccatcgcgcgggtggtcgccgaccgtagccgcggctgcggtggcggtggtggcgacggcgccggagagaacggagctgatgttgagaaatggatggaaggcctaaccaggaaacgagacctcgccgatgtgagtatttcctcaaacctatcgcatcttggtttcgtcctctgcttgctgtgatgaatcctgagttttgtagtttaggtgcattggaaaatgcagtgataaaattagatagagccaaaacgtgtcgcaatttcgtaccatgtacagcagtagtcctggtgaattactcactgaattggttcgcacaagatatttttctgtaacatccaccgccatactacctgagaagtgagaaccctcgaatgtggcactatctcggtgcacattgcatcccacattcccactaccgcagttctcataagctcgtggcctcgtgcaattgtccggttcataattttcacaatttttcccattattaaggctgtgtttagatccagggtaaaaagttttggcatgtcacatcggatatacggaattacggacacacatttgaagtattaaacgtggactaataacaaaacaaattacagattccgcctgtaaacttagacaaatttattaagcctaattaatccgtcattagcaaatgtttactgtagcaccacattgttaaaccatgtagcaattaggtttaaaagattcatctcgcaatttacacgcaatctgtgtaattagttatttttttcgtttatatttaatactccatacatgtgtccaaacattcgatgtgacagggtgaaaatttttgccaggggatctaaacagggcctaagacctggatttattttgaaagttgtattaatttccatgagataggagtacagctaccagatagaggagatacagagtttaaggacacgcacatgcaatgttttgtcacccagcaaattgaggaggtaccgaatttttaaggatttgccattttaagtggcatgagtgatgcacaggttccagacatctgggtgcactcaactaatggttgaaaaaaaaagttatgaattactccctccattcgtaatgtaaggtgcgcacgcatttcaagattcaactttaaaaacattcgactaacgattagtataatataaattgaattttatttgctgaaaataatatcattggattgatattttaatatactttcatatggttataattttgttgctacaaactttattttttttatttttttagagaagggtatttttttactcagcctctatatccaaccggatatatacagccattttaacttaggaacttagcctatcaaatagagaacttagccctcaaataacccaatctgaaattcgctcctatggagatttgaactcagggccttgggtgctactcaggtcactgcaaccactaggctacatgccctttcactgctacaaactttatggtatatgagaaattataagtcaaaaattagttttgtagaccgtaccgagtttgatcataccttatactatgaaatagagggagtatatctttttaagttaggaatattaatgcgatgtttggtgcctttcctttactggtagtcatgttgcttgacatatagagcatatcagtcactgatgttcagccatgtgatttcctaattggaacttggctccagtggatcgattttgttagttgtgggtgacctatgtcaagccaaatgtgatcattttgtttggaataccaagttaccaacagcatcactgagtacattgttgcccatttctctggattcgttgatactccaatttgagtgattatgctccgtttcttactttgttattgtgctgctgtcagccagttaatattgatttatttcaggtgctcaaagttctgccagtgaagtccttatcttgtaagcaaatcgagaggcgatcatgcatttctttggaggcatttatacgtgattactttttatgtgagtcccctgttatactcagtggctacatcgatcactggcctgcacggacaaagtggaaggacataagatacctagagaggattgcaggagatcggactgttcctgttgaggtatacttatgttttatgcatcaatttaccgttataaagtgttgttattccactcctcaattatgaaagaacaatttgcattttttggggaaaaaatgaattagtagttatgctgttcataaataaataaggtgatactgaaggactgtttttaatcttattcatcgataaaatggtgactttccagtaagtggtttgtgtactccctcttgacctcaattcaacaggtctcacaagtatttattattgtaagagcttttctgttcatatttatccttgcattatgataccttatattcctatatatgatgttaatttgagatgtgctgcatagaggaattgaattgcatgttgaaactagcatattctgccttataaatcctatccatccagtgtgcttcaaagttgatgcaaactttcaaaatccaaatcataccatgtccttgcaaaaatgtcaaggcatactttggatggataggacaatccgataatgaatgaacttacatatatgtgtggagctgcatcctcaacagctggatcttctaaacagatcgattcacatgttttatatttggaaattggcataatctcctaagcttattttctttgttttacaatatagattactattgtatatcatcggtttaattctgttgcttttttcgcagggtttgaaatttgccaagtttctgttttaccatttttgtgccatctagtattgtagtatgtaaaacatgacctgaaaaatcctcctttaaaaactggttatcttccatactatcttcttgcatctgttcatgtgatctaccaaaatgcatgtctattcaagtgttccgtacgtcctttagcatatcttttttaaaaacatttttatgtccttagtgtagttctgcttcaaataaattgggacttctttctttgttgaatggtgttcgaactgatcattttcccttttcttatagatgttcccagtgcactgatataaatagtggtgtctcaggttggaaaaaaatatttgtctagtgagtggaaacaggagcttatcacattttctcagtttcttgagatgatgtggtcatctgattgttctgcaaacttgacatatctagcgcagcatccactgtttgaccaggtgatcaattctccatatgcttgagtttatacacataaggaattagcagttgccatctaatagttgatggtactcaacatttaacagataaaagagctccgtgaagacataatggttcctgaatattgtaacgctggtggtggggaactccaaaagctcaatgcctggtttggccctgaagggacggttacaccattgcatcatgacctgtatcataacctttttgctcaggtatctcaatctcatgaatatgttattctcgatcctttggtgtttaatttcagattacttctgcttcaatgcaaacaaagttattcttctttcttacaactgctttccatgaattttttcaagagctaatttaatttataatgcagctacttttcttttgttacttcgtaatgtgatactactccattttcattgtatgataattcgggtttcatgacattttagatttttagttgtattatctatatttattctctacctagtttatatacacttttaattttgtaatttgcggagactaggagctttggaatgtgcagaactaatgtctctcaggtttatagagggttgttaatcgtcaacagtggcagtaaccatctatcttagttgagacacacatcaacccataatattattgtaacatgtatcgttttccttggcccatgaacatcctgaagaagttcaattgattagttcttgcaattgattagttcttgagttcaatattgagaagtagcataagacaaatggagtgcacagttgttattgccaccaaaacatgttctctagtagtattattccttcctatagtagaagtatttgtcgaactattttgtttgtattcaaatgcccacgagtaaatcttcctttcttggactatacttgtctgtttttctccaaaaagggaaaccctcagatactggtattcatccaacgcgtagatcacccactctgttttgagatcactggaatgtttgcactgcaccaaagctcatattccgataaaaggttgtggccatatccaaaatggctacatgtaagtttgtagcttctgttggctgctgtaacaattgaggttatccattactgaattttatttggtgcggtgaggacttcgtttagttttctcaatatttgctgttcttcacaggtcttgggcaggaaatattttagactctattctgcttccatctccaatgacctttaccctcacagagaaactatgctaagcaatattagtcaggtgcgtagtctcttaataatctggaacaaaaaatttgagttcagttgtgttttaaacacaatatgacaaacaatgagaccagattttcttctggttcgcctggtcatcatttgcttctttttgtccaacaagttatccatgttcctctcatcctgagcctttgctgtcatatatttatgaaactaagcttactagttgcaagtaaaattgatcatcacggaactcaattctctgaatcaatgtctgggcaggtagatcttgacaacattaacgtaaatgagttcccgaggacaggagacgttgaattcatggacggcatattggaggaaggtgacctgctttacattccaccaaaatggtggcattacgttagatctctctctactagtttctctgttagcttctggtggcgaacgtcaattcctcctcctcagggctcgtaatgttattgttttgatcatccatgacgtttgcgtttctatcatcagatgttagaaacccaagaaaaacttaattgaacccatgttttatgatccactattttgtgggtacggccttgttacggtccgtgtatatcatactagcgtgtgttacaatcttctagtacttctgtatgaccagaaacaaccgggatagtcctaggggtaaagccacagaggcacacaattcacaaaaacagtgccaaaattagacatctctggcttttaaagaagtgaaaactgattatgctgtaatgtactccctccgtcccataatataagggattttgacattttacttgtactgtttgaccactcatcttatttaaaaaaaattgtgcaaatataaaaaaacaaaaagttatgcttaaaatactttggataataaagtaagtccaaaaacaataataatttcaaatttttttgaataagacgaatggttaaacagtgcaaacaaaatgttaaaattgtcagggttacgagttaggtataccctttacccttcgatatacgtcgcatatcggtatggcatacccacgcgcatacggatattctctgcacacattaaggaaatccttcacggaatttacggatggaaagagttctactcggacaaggctgggtcgtcaatgtatcgtgtaaggtctgatgtctccaagttctacttggaaactgcttgatctgcgatataaaagggaccccccagggaggacctaaggcatcgaatctcagagccaacacaaccctcacagcctacgaaatcggagcctacatgagccaaatcgccgggaatctagtcgaaccaactcaaccacgatctcgccggatccatcgagttccattgttccctttgtaacctgtgttttccatcatataatcccacatcaactggattagggctattacctatcaaggggcctgaaccagtataatcttcgtcttttgtctgcttgatgtcgtcttacgtagatcctgtaccaacgtaccccaatatcctctatatccggtctacgggtatcacccgtcgacagtggcgcgccaggtaggggcacttggtgctcaaggttctactactatgtcatccagcttcgtcgacaacagcgtcaacaccaacctcaaccaagtattccctgcttcaacaatgctggtgtggactcaagtcgacgaaatcgtcttcccggtttacaccacaataccgatctcagccggtccatcaatgactggaaacaagaacgcagtggctacagaccaagacgactccttgtcgaaagatcctcccgccgaggcagagaacggaacatcgacgacatccgagctcgagaaggattctaatgcggccaaaccttgttgtcccgacatgaaccgtgagccgatgaagatgacttccgaagcgacaaagtcctggtgtcctatccacaaaaccaggaaacacactttgcaagcctgctgggtttttctcaacgtccgcgctgaaattcgcgcctgcaaagagcgtggaattcagcgtatttctccaactcgtgatgtctattatcctattcacaagacaaagaatcacgacctctccagctgcaaggtctttctcagcgccatgaaagcgccatctcctaaagtccaacagtcacacatccccatcagggataaagacaaggaacaaggagcgatgccaacctcagatcgatttgttggggtaatcgatatcgatccccacgaaccatcagtcttgcaccttctcgtagactatggatcatcgagaacgagcgcgccgcgggaggtattggctatcgatgatgtcggcacgtcagcgcgcaccaatgcagaagcggagaatcaattggccactccagcccagcacatcagagccgtcaacgctatactgaggaaaaccccctacgatcctgttctgaacgatgatctcgcacgttggacagaacgactacgggaatcagtgaccaacctcagcaacgcgttcggagaggccgctgccgcagcgcacccggagcagccaccaactggcgatgccaatggtgaagaccctgaacggagggaatcgcctcatcgagctacccctccacctggcggcactggcgatctccgagatcacctcaacggccgccgagaggcacgacgcacacgagacaacgagaatcgttcccggcgtcatgtctcttcacggcgccatgataacgaagatcgaggagaccgctcaaacgaagaccgagactatgataaccgccaccaccgccacgatcacaatgatcgcgaacggcgggtgccaggtgatactagtcgaggacgtcgccataatgacgacgatgatggagaccgtcgccgagacaacagcgggagacaacgacaggactctcgagatccaggccgacatcctcgtaaccgtacgccggaaccgagcgacccatcatcatcgtcatcatcctcgtcttcttcatcatcagacagacatccacgaaggacacacgatcgccgacaacccaccgtccccagcgctaggtgtagagctttcagtcgttccctgcgtgatgtccgatggcctgagagattccgacttggagcaatagaaaagtacgatgggagcaccgacccagaagagttccttcaagtctactccacagtactctacgctgccggagcagacgataacgcattggcgaattatttgccaactacgttaaaaggctctgcacgttcatggctgatgcatctcccgccctactgaatctcttcgtgggcagacctatggtagcagttcgtcgccaacttccaaggaaactacaagcgccacgcgatcgaagacgacctacacgcgttgacacagaactcgggtgaatccttgagggagtatgttcggcgcttcaacgagtgcagaaatacaatccccgaaatcaccgacgcttctgtaatttgcgccttcaaatccggtgtcagagatcgctatactactcaggaattggcgacaagacgcatcacaactactcagagattgttcgaaattgttgagcgatgcgcccacgcagatgatgcgctaagacgcaagaatgataagccgaagaccgggggagagaagaaaccagccacggacgcacctgagtcaagcaagaagaaaaatcgcaaaaataggaaaaggaaagctcaagcggaagacctcgcagcagaatacgcgaaccctcccaagcgcccagacccacagagtagcgacacaaagaaagcatggtgccccatacataagatggacagacattctttggaagattgccttgttttcaaaaaataa</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0508500, RefSeq:Os08g0508500