Os08g0509200

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Revision as of 13:07, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0509200| Description = Similar to Beta-primeverosidase (EC 3.2.1.149)| Version = NM_001068736.1 GI:115477209 GeneID:4345995| Length = 4274 ...")
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Gene Name

Os08g0509200

Description

Similar to Beta-primeverosidase (EC 3.2.1.149)

Version

NM_001068736.1 GI:115477209 GeneID:4345995

Length

4274 bp

Definition

Oryza sativa Japonica Group Os08g0509200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25338388..25342661

Sequence Coding Region

25338763..25338928,25339031..25339139,25339293..25339395,25339520..25339551,25339652..25339872
,25340195..25340310,25340396..25340651,25341163..25341250,25341380..25341457
,25341788..25341863,25341963..25342021,25342123..25342189,25342364..25342492

Expression

GEO Profiles:Os08g0509200

Genome Context

<gbrowseImage1> name=NC_008401:25338388..25342661 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:25338388..25342661 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgttggcttctccttgccctgttcttggttgctctggtgagcaacggcgccgccgtccatggcgccttcaacaggttcagcttcccggaggacttcatcttcggcaccggctccgcggcttatcagtacgaaggcgctgtgaacgaaggcggcagagggccgagcatctgggacacgtacgctcacattccaggcaaagttgaagatggtagcaacggggatgtagcagtggacttttaccatcgctacaaggaggatctgaacttcgtgaccgacatgaacatggacgccttccgtttctccattgcttggagcaggatcctgccaaatggaaccatcagtggaggaatcaacaaagaggggattgctttctacaacagcctgattaacgaggtcatatctagagggttgaagccatttgtcaccatcttccatttcgacaccccacaggctctggaggacaaataccggagcttcctcagtgaaaacattgtgaaggatttcgtggactatgcggacgtgtgcttccgtgagttcggcgaccgggtgaagtcatggaacacgttcaacgagccgatgatcttctgcgccggcggctacggctccggcaccaaggcccccggccgctgctcgccgtacgtctccaagaaatgcgcccccggcgactccggcaacgagccgtacgtcgccggccacaacctgctgctcgcccacgccgaggccgtccgcctctaccgccaaaagtaccaggcgacgcagaaggggcagatcggcatcacgcaggtgtcgcactggttcgtgccctacagcgacgccgccgccgacaagcacgccgtcaggcgcagcctcgacttcatgtacggatggttcatggacccgatcgtgttcggcgactacccgggcaccatgaggaagttggtcggtgaccggctgcccaaattcacagccgagcagtcggagttggtgaagggatcctacgacttcatcggcctcaactactacaccaccaactacgctaagagcgttctacgacgcccgagcaagctcaaacccgcctacgctactgacaactgggtaaatcaaacagcttaccgcaacggcgtcccgatcggtccgccggcttttaccaagatcttcttcacctacgcgccgggtctgcgtgagctgcttctgtataccaagaggaagtacaatgaccctgacatctacattgcagagaacggcaccgacgaggcgaacaacagcacgatccctatcgccgaggcgctcaaggatgacaaccgaatatccttccactaccagcatctccgcttcactcagctcgcaatcaaggaaggggtgaaggtgaaaggctacttcacgtggacgttcatggacgacttcgagtggggcgacggctacaccggccgcttcggcctcatctacgtcgaccgcgaaactctcaagaggtatcgcaagaagtccagctactggttcgctgacttcctcaagcgatga</cdnaseq>

Protein Sequence

<aaseq>MRWLLLALFLVALVSNGAAVHGAFNRFSFPEDFIFGTGSAAYQY EGAVNEGGRGPSIWDTYAHIPGKVEDGSNGDVAVDFYHRYKEDLNFVTDMNMDAFRFS IAWSRILPNGTISGGINKEGIAFYNSLINEVISRGLKPFVTIFHFDTPQALEDKYRSF LSENIVKDFVDYADVCFREFGDRVKSWNTFNEPMIFCAGGYGSGTKAPGRCSPYVSKK CAPGDSGNEPYVAGHNLLLAHAEAVRLYRQKYQATQKGQIGITQVSHWFVPYSDAAAD KHAVRRSLDFMYGWFMDPIVFGDYPGTMRKLVGDRLPKFTAEQSELVKGSYDFIGLNY YTTNYAKSVLRRPSKLKPAYATDNWVNQTAYRNGVPIGPPAFTKIFFTYAPGLRELLL YTKRKYNDPDIYIAENGTDEANNSTIPIAEALKDDNRISFHYQHLRFTQLAIKEGVKV KGYFTWTFMDDFEWGDGYTGRFGLIYVDRETLKRYRKKSSYWFADFLKR</aaseq>

Gene Sequence

<dnaseqindica>3734..3899#3523..3631#3267..3369#3111..3142#2790..3010#2352..2467#2011..2266#1412..1499#1205..1282#799..874#641..699#473..539#170..298#gctttcttcatttcttcacctgatattcccgtgcgtactaatgagatgacctctcgagctacttaaacaagtagagacacttcttcatttgcagccaatttgattgcttgcaaaattgtgccaaattttcagtactagataagataggatcagagttcgaccagctgggatgcgttggcttctccttgccctgttcttggttgctctggtgagcaacggcgccgccgtccatggcgccttcaacaggttcagcttcccggaggacttcatcttcggcaccggctccgcggcttatcaggtttcatgttatggcctctctggctgaaattcggcctctatattcacgagtggatatgtgcagccaactagcctttcttgctactggtgtccatgttcagagtaaaaaaagacaaaaaaacagagcaaaatctttggtgctttctgcattttctgaattttcattctgttgcagtacgaaggcgctgtgaacgaaggcggcagagggccgagcatctgggacacgtacgctcacattccaggtcactgtgtactcctatatgttgttaactgaaggagctgtcagtagcaggttcatttctgtactgaactgaaactctgaaacattcctcttttgtttcaggcaaagttgaagatggtagcaacggggatgtagcagtggacttttaccatcgctacaaggtggcggatctttctttctttctttctttggactgaattgccattgttgaatttagagcttttaaggttcttcctttcctgaccaaaattgagctgcaggaggatctgaacttcgtgaccgacatgaacatggacgccttccgtttctccattgcttggagcaggatcctgccaagtaaggacatactctactccctccggttgttgatgctagtaattatcatttattttagtatgattcatttttatcattagagatattttaagcacaacttatattgttcaacatatacacaaattttctgagtaaaatgaatcgtcgaaaaaccatcggcgtcaaaccatatatatatatatatatatatatatatatatatatatcgatgcttaaccacatgtccataaataaatgcacactaatgtggaccacatgacagaaacctgctttattttttaaaaaataaatatcatcatcggtcactaatgatttgcttcctccctgcagatggaaccatcagtggaggaatcaacaaagaggggattgctttctacaacagcctgattaacgaggtcatatctagaggtgaagataatgtttcttctttcttttttgggagaggttcttgttgttgagaaaatcttttcttggaccatatatttttgttctgaatatcggactcctggctgatgttgatgtccatggttgttgaagggttgaagccatttgtcaccatcttccatttcgacaccccacaggctctggaggacaaataccggagcttcctcagtgaaaacattgtgtaagttaattgcccgctacaaattgccaagaaaaaatgtttaaaaataattaaattttataataccctagatattagtagagtctaaattatacaaaatatacgcgttttgacatgtggcacataatatcaagtattatggttttagtcttattacaaaaccacaccgttaactaatttgagttgtttctatcataattttttttaaaaaaatgcttaacttaggtggttaagacttatatacgatgatgaaagaataataaattctatgtttgattttagaacttataagtacagtagtcaaatattaaatggttaacaatgatttttatgaaatactaaaactacaatatctagaattatgtatcatacaccaaaatcctataatcatagtgctggggttatgcgaaatttactttacttactgttctactagcttcagaataaaaaaaaggaaaacaaaagggaaacataatgaattggtgatcctagcctgtgtgtaccaatttaggaaggatttcgtggactatgcggacgtgtgcttccgtgagttcggcgaccgggtgaagtcatggaacacgttcaacgagccgatgatcttctgcgccggcggctacggctccggcaccaaggcccccggccgctgctcgccgtacgtctccaagaaatgcgcccccggcgactccggcaacgagccgtacgtcgccggccacaacctgctgctcgcccacgccgaggccgtccgcctctaccgccaaaagtaccaggtagatatcatccatctgaattctgaacatggaagcgttcatggcgaatcggcgacctccaatccatccatccatggtgatgcaggcgacgcagaaggggcagatcggcatcacgcaggtgtcgcactggttcgtgccctacagcgacgccgccgccgacaagcacgccgtcaggcgcagcctcgacttcatgtacggatggtatgttcctctacaagccgtaacgttcattaatcattaaaaaaataaattataaacaaaatttttatatatgtcctaggtgacttacaagcgaatgctaaaaaataaactaatttaaaaataaaatagttatcaactcgaaaatttaaattttgactgcgtcttataagctgaagagcaaacgatgagattgtaaatatagtttttttcttcctttgaaactggtcaagaatttaaaattactaaaattttgaatatttggttggtaaaatccggtgaataattgagggtgtgtcaaaacgtaactctttttggcctttaggttcatggacccgatcgtgttcggcgactacccgggcaccatgaggaagttggtcggtgaccggctgcccaaattcacagccgagcagtcggagttggtgaagggatcctacgacttcatcggcctcaactactacaccaccaactacgctaagagcgttctacgacgcccgagcaagctcaaacccgcctacgctactgacaactgggtaaatcaaacaggtactcatatgaacacattctcccaaattctcacatgttttgaaccaatcaaagtacaattggcagtaaaataaaaattgaattgcattctgatcaacagcttaccgcaacggcgtcccgatcggtccgccggtacgcagctacaacaacttgtttgatcgtttcattttgatgaaattgtttgatcatttgatcatgtcatcatgtgcatcgattgtgtggtgttaattgatttgcatttcactctgactcataggcttttaccaagatcttcttcacctacgcgccgggtctgcgtgagctgcttctgtataccaagaggaagtacaatgaccctgacatctacattgcagagaacggtaactaattacatgcatatatacaaccacatcatactgtcaatctgtctgtcaaatatttcagttcatctttgcgacttgtttaattaatttcttgcatgaaattatccagtttcgacccatttcagttacctctgttcttgattaattcaggcaccgacgaggcgaacaacagcacgatccctatcgccgaggcgctcaaggatgacaaccgaatatccttccactaccagcatctccgcttcactcagctcgcaatcaagtagccacatcaaaatccaatcaaattcagttctgtttcttctggatataggtaggttggctgcaatgtgagtgtgaattgaaatttggacgaaatttgcagggaaggggtgaaggtgaaaggctacttcacgtggacgttcatggacgacttcgagtggggcgacggctacaccggccgcttcggcctcatctacgtcgaccgcgaaactctcaagaggtatcgcaagaagtccagctactggttcgctgacttcctcaagcgatgatgaaaaagaagaagaaatcaactagctcacttcactagcctgatctcctgaataaaatgatctcctgaataaaaaagttcctgaataatcttttggcctcaatgattcgactggctgcatgtggccattgtacttgttagctctgagaaataaaagtgcagtcttgactctcgacgaatataagcaatttaacttgtgtactactactgctgacaaatactggggaatataagcagtaattcagagtttcagagacatgaatgatcaattgtaagcagtatttcagcagtagtttagagacatgtaattcagagtttgcttgtacacaaactcagtaattcagagtttcagagacatgaatgatcaattgtaagg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0509200, RefSeq:Os08g0509200