Os08g0510700

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Revision as of 13:07, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0510700| Description = Homeodomain-like containing protein| Version = NM_001068743.1 GI:115477223 GeneID:4346003| Length = 3340 bp| Defini...")
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Gene Name

Os08g0510700

Description

Homeodomain-like containing protein

Version

NM_001068743.1 GI:115477223 GeneID:4346003

Length

3340 bp

Definition

Oryza sativa Japonica Group Os08g0510700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25414026..25417365

Sequence Coding Region

25414390..25415397,25416040..25416610,25416791..25417194

Expression

GEO Profiles:Os08g0510700

Genome Context

<gbrowseImage1> name=NC_008401:25414026..25417365 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:25414026..25417365 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccgccagatcgggcgaccccggcgtctcgccggagtcgtcgtctgcggcggcggcggcggcggggtccgggggcggggagatctgggggacgtcggaggacctgctcctggcgtgcgccgtgagccgccatgggacggcgagctgggacgcggtggcgaaggagatgcagtcgaggtgcccttccgccgccgtgttcacccccaccacctgccgcctccggttccgcgtcctccaccgccggttctccggcggcgtcaccgccgagaacgaggacgccgacggcggcgaggaggaggaagaggccgacgccgccgccgtcgccggctgggtggaggaactccgcgagctgcgcgtcgccgagctccgccgcgaggtcgagaaatacgatctctcgatcgggtcgttgcaatcaaaagtgaaacggctcaaggaggagagggaaaagagcatctccggcgagacgaagccgccgccggcggcggcggcggtgaaggaggaggaggaggatgtacggaagggatcaccggaggaggccggcgccgtggaggacagggtctccggccacgaatccggccggtcatgcaaggagtcgaactcgtcagatctgaagcggccggagaacgaccccgcggtcgccgacgacgacgaccgggaggcggaggaggaggaggaggcggcggcggcgcccgcggccggcgacatcgccgtgaaggaggaggcgtcgggcgagtcggtggctgggtcgaaggaggcggacgtcgagaaggagagcagcgacgtgcagagctccgccagcccgtcccgccgccggcgacggaagggcggaggcggcggcgaagaggcggaggcggcgtcgccgtcggtgtccgtgcccctccccgccgccgaggccgagccgctcgtcgccttcctcgagtcggtccggaccagcaaggccggcgccgtgttcgagcggcggctcgatagccaggatggggagaggtacagtggcacgatcaggcgccatgtggacctggagacggtcaggtcgaggctggtgggtgcaacggcggcggcggcggcggcggcgtgctacgcgtcggcgtccgagttctaccgcgacatgatgctgctctgcgccaacgcgctcgtcttcttcccgcgcggctcgccggagcacgccgccgcgctccagctgcgcgcgctcgtctccaagcaggtctccaaggaccggcagcctcacgccggggcgaaggcccccgcggcggcggcggaggaggaggagaagaagaagccggccaaggccgacgccgacatcgctgggccgctgctcgagaaggcgccgatcatcgtctgccggaagcggagctccatcgcgaaggccgcggcggcggctgccaagggggagaaggcggagaaggcagagacggacaagaaggagaaggacggcagcgaggagaagaagaaggctgcggcggcagcgacgacggcgacggcggcggccactgccaaggacaagaaggctcggggcatgaggacgaacaagagccggggacccgcgaggaatcagaagacggcgaagctctcggagaccggcgaggggaccaagaagtccgacaagaagggcggcggcggaggcggcagctcttcggcaggggcggcggcgggcggggttgccaagaagcgaaacgccgtggatttcctgaaccggatgaaccagaacggctcgccgtcgacggagagggtgtcgttgctggagacgctgaagctctccgcggcggcgacggagcagcagaagaagtcgtcgtcgtcgtcatccgggaagggcgacggccggaaggaggccggcggctcaggctccaagaagggcgccgccgcctcgacgccaccagggaggaggatcggtcggccaccgaagcgggcggccgcgccgccgacgccgccgccgtccaagagggccaaggacgacaagccgaccaggaagcgcgggaagaagtga</cdnaseq>

Protein Sequence

<aaseq>MTARSGDPGVSPESSSAAAAAAGSGGGEIWGTSEDLLLACAVSR HGTASWDAVAKEMQSRCPSAAVFTPTTCRLRFRVLHRRFSGGVTAENEDADGGEEEEE ADAAAVAGWVEELRELRVAELRREVEKYDLSIGSLQSKVKRLKEEREKSISGETKPPP AAAAVKEEEEDVRKGSPEEAGAVEDRVSGHESGRSCKESNSSDLKRPENDPAVADDDD REAEEEEEAAAAPAAGDIAVKEEASGESVAGSKEADVEKESSDVQSSASPSRRRRRKG GGGGEEAEAASPSVSVPLPAAEAEPLVAFLESVRTSKAGAVFERRLDSQDGERYSGTI RRHVDLETVRSRLVGATAAAAAAACYASASEFYRDMMLLCANALVFFPRGSPEHAAAL QLRALVSKQVSKDRQPHAGAKAPAAAAEEEEKKKPAKADADIAGPLLEKAPIIVCRKR SSIAKAAAAAAKGEKAEKAETDKKEKDGSEEKKKAAAAATTATAAATAKDKKARGMRT NKSRGPARNQKTAKLSETGEGTKKSDKKGGGGGGSSSAGAAAGGVAKKRNAVDFLNRM NQNGSPSTERVSLLETLKLSAAATEQQKKSSSSSSGKGDGRKEAGGSGSKKGAAASTP PGRRIGRPPKRAAAPPTPPPSKRAKDDKPTRKRGKK</aaseq>

Gene Sequence

<dnaseqindica>1969..2976#756..1326#172..575#agacgaaccacacgcagaagaagagagagaaagagagagagagagaaggcccaaacaccaccaaaccctagccctcacctcgccccgccgtccatggaggcggcgctgtgacccgccgccgccgccgccgtcgtcgtcgtcgtggcgtgcggaaccgatagggcggaggggatgaccgccagatcgggcgaccccggcgtctcgccggagtcgtcgtctgcggcggcggcggcggcggggtccgggggcggggagatctgggggacgtcggaggacctgctcctggcgtgcgccgtgagccgccatgggacggcgagctgggacgcggtggcgaaggagatgcagtcgaggtgcccttccgccgccgtgttcacccccaccacctgccgcctccggttccgcgtcctccaccgccggttctccggcggcgtcaccgccgagaacgaggacgccgacggcggcgaggaggaggaagaggccgacgccgccgccgtcgccggctgggtggaggaactccgcgagctgcgcgtcgccgagctccgccgcgaggtcgagaaatacgatctctcgatcgggtaaaaaccagcccgaaaataaccaaaaaaagaaattaataaacaccttgtttttttattttaactttcggctggttcgtgcattgcccgccactctccaccgtctgatgctgatcggtcggccacaatttttttggaataaactgcttattgcgattttttttatttttaaatggttaggtcgttgcaatcaaaagtgaaacggctcaaggaggagagggaaaagagcatctccggcgagacgaagccgccgccggcggcggcggcggtgaaggaggaggaggaggatgtacggaagggatcaccggaggaggccggcgccgtggaggacagggtctccggccacgaatccggccggtcatgcaaggagtcgaactcgtcagatctgaagcggccggagaacgaccccgcggtcgccgacgacgacgaccgggaggcggaggaggaggaggaggcggcggcggcgcccgcggccggcgacatcgccgtgaaggaggaggcgtcgggcgagtcggtggctgggtcgaaggaggcggacgtcgagaaggagagcagcgacgtgcagagctccgccagcccgtcccgccgccggcgacggaagggcggaggcggcggcgaagaggcggaggcggcgtcgccgtcggtgtccgtgcccctccccgccgccgaggccgagccgctcgtcgccttcctcgagtcggtccggaccagcaaggccggcgccgtgttcgagcggcggctcgatagccaggtaagaaaaaaaaaactcctcccattttcactcacagtaaaaaaatgaaaaaaaaagagaaaacatctggtttgcttctaataacatttcaattacccgcactttaaatttttaactgcacattcttgcgatttattattaaccgtttggcgattagtgcctcaactaatcacgaaattatagcggctgatcagagtaaagtacaatcttaaaaggggtcagcctcttcgttcgtcacggtcgtcatgagcaaggaaacaacgtggaattttcgcttctcgtacggccgcgatttggtcgacgaatctgagccgttggatttaaatgtcccacgaggatgcggagataataataaaaactgagggtgaaaaacgagtggcgttgggagaggcgcggcgttgtttggttccgtggcggtgggcccgggctggctcagcatgggcccgtcatgtgccaccacatcatcgttgtgggggagatgacgtgtgggcccatcatgtcggccactcgctgccaagcccaataaaaatgatgcaacgatccttgaccgtctccaaatgcgagtcgcccaggattatgaattttaagctcgttttttgtcatttttttaaactgatttttgaatctttgttcattttgcaggatggggagaggtacagtggcacgatcaggcgccatgtggacctggagacggtcaggtcgaggctggtgggtgcaacggcggcggcggcggcggcggcgtgctacgcgtcggcgtccgagttctaccgcgacatgatgctgctctgcgccaacgcgctcgtcttcttcccgcgcggctcgccggagcacgccgccgcgctccagctgcgcgcgctcgtctccaagcaggtctccaaggaccggcagcctcacgccggggcgaaggcccccgcggcggcggcggaggaggaggagaagaagaagccggccaaggccgacgccgacatcgctgggccgctgctcgagaaggcgccgatcatcgtctgccggaagcggagctccatcgcgaaggccgcggcggcggctgccaagggggagaaggcggagaaggcagagacggacaagaaggagaaggacggcagcgaggagaagaagaaggctgcggcggcagcgacgacggcgacggcggcggccactgccaaggacaagaaggctcggggcatgaggacgaacaagagccggggacccgcgaggaatcagaagacggcgaagctctcggagaccggcgaggggaccaagaagtccgacaagaagggcggcggcggaggcggcagctcttcggcaggggcggcggcgggcggggttgccaagaagcgaaacgccgtggatttcctgaaccggatgaaccagaacggctcgccgtcgacggagagggtgtcgttgctggagacgctgaagctctccgcggcggcgacggagcagcagaagaagtcgtcgtcgtcgtcatccgggaagggcgacggccggaaggaggccggcggctcaggctccaagaagggcgccgccgcctcgacgccaccagggaggaggatcggtcggccaccgaagcgggcggccgcgccgccgacgccgccgccgtccaagagggccaaggacgacaagccgaccaggaagcgcgggaagaagtgaacggtcgtcggaatggggaggtggcgggaaaggctgcgggtgtaaatgtttgtaggggttggcggtagaaaaaaaccttttgtttttgtgttttggcgccaattgttgtagcgaggaggtgggagaatttttgttgctttttggcgggagatgaacgatggaacatctggtttcactctcacctcgatacttcatgaaagattaagaactttggtgaaagaatcgtgttcaccttaaggctggttttgtaggatatgtttttgactggattctgtaacctacactgaatcaggacacattggtgtcaatatggcatgaatcgaatcaagaacatatggtgtcaatgtggcatcatcatttaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0510700, RefSeq:Os08g0510700