Os08g0518400

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Revision as of 13:08, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0518400| Description = Similar to Phytosulfokine receptor precursor (EC 2.7.1.37) (Phytosulfokine LRR receptor kinase)| Version = NM_0010687...")
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Gene Name

Os08g0518400

Description

Similar to Phytosulfokine receptor precursor (EC 2.7.1.37) (Phytosulfokine LRR receptor kinase)

Version

NM_001068787.1 GI:115477311 GeneID:4346049

Length

7615 bp

Definition

Oryza sativa Japonica Group Os08g0518400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25823571..25831185

Sequence Coding Region

25823571..25823654,25823683..25823749,25824000..25824075,25824635..25824697,25824887..25825143
,25825556..25825631,25826345..25826463,25826546..25826687,25826771..25827264
,25827645..25827783,25829052..25829123,25829207..25829287,25829924..25830090
,25830189..25830394,25830548..25830674,25830762..25830833,25830995..25831185

Expression

GEO Profiles:Os08g0518400

Genome Context

<gbrowseImage1> name=NC_008401:25823571..25831185 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:25823571..25831185 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaccggcgttgaggcggtgcttcggaagattcttgcgtttcattcgcaccaattttcccaggaaaccaagatcaccagggggagtctaccacaaggctccaccattgttccaccgagtcatagtcgctccatttgctcatttggagcacaagagagttcagagcccattcgacttgaagtgaacatatataggttttccaagaacttgcctatgcagtgccgtcttcattttcaagagggttcttttagtttgtatgagcctttcaattacgtttctgtgcgattgtttcataagcatcgactgtggatatactgcaaccccgagttacaccgatactgtggatatactgcaaccccgagttacaccgataccaacacaagtataacatatgtgggcgatgaaggttttatagaagcaggcataaaccacaatgtagaccttaacaacttgcagcagacagatcttgcacggcgatactcaaccatccgtttctttcccaatggaacgcgcaattgttacacgttcaagtccctaacaccaggtgactcgatgtctcgggagagtatttgcggtgatggactgggagtcggcttggggataagacgacgtccgtggtgcaagtacttgctgagggctgcctttggctatgggaactatgataggataaacaggctccctacctttgatctctacctaggggtgaactactggacaacagtaaggattgtcaatgccaggcttgacttgaggccattccaggaaaaaatttatccaggttccaatatgacgcatgctctagtcttgctcagcttcttccgtaacacggtcaaattcgggcccaatcgctaccactttggaactgatgatcatcaaatcaggttcccagatgatccccgcgataggatatggcagaagtatgaagatgtctcagaatggacggatgtgccagataccgtcaatgggatagtccagaactctcccaacgatacatacaacgtgccatctgcagtgatgcgcagtgtatccactccgttgaatgattcaagaatggacctgtcatggagttcagattcttccatgaacgttgacattgccaccaagttctttgttgttctgtattttgctgaggtggaggccatccaagggaatgcattgcgtcaatttgatattattctggataataacacattagttagtgcattcagtccaatctccatgatgactagtgttttctcgggcattgttcaaggttctggcagtcatggcatctcccttgtggcgacatcaatctccaatcttccgcctttgattagcgcaatggagatattcgtggtgcgcccactgaatgaatcttccacttattctgaagacgcacattctatgatgatcatccagacaaagttttctgtgaagagaaactgggcaggtgatccatgctccccggcaaccttttcatgggatgacttgaactgcagttacactccccatggtccaccaagaataactggcttggatctatctcacaacaatctgtcgggacctatacctgattttctgggccaagtgccatcgctgatatttctagatttatcaagcaacaacttcagtggatcaatcccaactaatcttctacaaaagtctcaggaaggattactgacactaaggaccgagaataatccgaatctttgtggaactgacaaatgcgatctgattctgaatcaaagcaagagaaagacaaaacttgtgcttgaggttgttcccccagtcgtacttgtgtttgtagttctacttatacttgctatattttggtactgcagaaagaagagaccagcagatgttactggtgcaactaatccatttgagaaccggagattcaagtacaaggaactcaagctcatcgcagatagtttcaaaaccataattggaaggggtgggtttggtcctgtataccttggctatctagagaatggaactcccgttgctgtgaagatgagatcacaaacatctaatcaagggaaaacagagtttttggctgaggctcagcacttagccagggtccatcacagaaacctggtgtcattaataggctattgcaacgataagaaacatctagcccttgtgtatgagtacatggatgggggaagcctagcagaccacttgagaggtcaagaagatcttcacactgaacccctcacttggttgcaacgccttaacattgcgttggactctgccaatggactggaatacctgcacaggtcctgcagtccaccattgatccatagagatgtgaaggcccacaacatccttcttactgcaaatttcaaggcaaagatttcagatttcggcctgacaagggctttcagcagtgagacgaacacacactctacaaccgaaccagcgggtgtaggatcgaatagcaagaactaa</cdnaseq>

Protein Sequence

<aaseq>MDTGVEAVLRKILAFHSHQFSQETKITRGSLPQGSTIVPPSHSR SICSFGAQESSEPIRLEVNIYRFSKNLPMQCRLHFQEGSFSLYEPFNYVSVRLFHKHR LWIYCNPELHRYCGYTATPSYTDTNTSITYVGDEGFIEAGINHNVDLNNLQQTDLARR YSTIRFFPNGTRNCYTFKSLTPGDSMSRESICGDGLGVGLGIRRRPWCKYLLRAAFGY GNYDRINRLPTFDLYLGVNYWTTVRIVNARLDLRPFQEKIYPGSNMTHALVLLSFFRN TVKFGPNRYHFGTDDHQIRFPDDPRDRIWQKYEDVSEWTDVPDTVNGIVQNSPNDTYN VPSAVMRSVSTPLNDSRMDLSWSSDSSMNVDIATKFFVVLYFAEVEAIQGNALRQFDI ILDNNTLVSAFSPISMMTSVFSGIVQGSGSHGISLVATSISNLPPLISAMEIFVVRPL NESSTYSEDAHSMMIIQTKFSVKRNWAGDPCSPATFSWDDLNCSYTPHGPPRITGLDL SHNNLSGPIPDFLGQVPSLIFLDLSSNNFSGSIPTNLLQKSQEGLLTLRTENNPNLCG TDKCDLILNQSKRKTKLVLEVVPPVVLVFVVLLILAIFWYCRKKRPADVTGATNPFEN RRFKYKELKLIADSFKTIIGRGGFGPVYLGYLENGTPVAVKMRSQTSNQGKTEFLAEA QHLARVHHRNLVSLIGYCNDKKHLALVYEYMDGGSLADHLRGQEDLHTEPLTWLQRLN IALDSANGLEYLHRSCSPPLIHRDVKAHNILLTANFKAKISDFGLTRAFSSETNTHST TEPAGVGSNSKN</aaseq>

Gene Sequence

<dnaseqindica>1..84#113..179#430..505#1065..1127#1317..1573#1986..2061#2775..2893#2976..3117#3201..3694#4075..4213#5482..5553#5637..5717#6354..6520#6619..6824#6978..7104#7192..7263#7425..7615#atggacaccggcgttgaggcggtgcttcggaagattcttgcgtttcattcgcaccaattttcccaggaaaccaagatcaccagggttcgtaaaggaatgcgggggttatcaggggagtctaccacaaggctccaccattgttccaccgagtcatagtcgctccatttgctcatttggaggtgagtttgggtccacctttgtatttctgtccagaccctctttgtaactctgcagtgtgccagaaggtggaccgctgattatacagcacagcgggtaggtcttctgattttgccaacctcttttcttgaacctgtcagctgtccagagtctattttgggtgactagctaggagaagaatttgcattttagtggggcccagcgtgtgcactttcaagtagtaactaaacagtattatctattcatcgacagcacaagagagttcagagcccattcgacttgaagtgaacatatataggttttccaagaacttgcctatgcagtgccggtgagtctctgcgcgtcgtccctgtcgcggttgaagatgaaattgctcttgtgatcaagcaaatcgcggacagcgatgaagccgaacacatggagcggccactccaatccccctctcaattcggttaccttccatgagtagatctccatgcatcgaaaggtttgtcgttgtaggtgtggctcattggccctctagtagctgcaaaattaaaaaatatatataaaaaatagataaatcgccatcagttaatcgttcctccaactccagtgcgtggaacaagaagggttgaattgaatcaatagatcaactacactggatcaaatcgcaagaagaagaaaatgtactgatatcctcgaaaccgcacacgtcggcccaaaaaagcgagaatatgaaacggtagtcgtcagggttgggctcctcgtaatctccggtccgcggcttcttcttcttcttcttctcctccgagtcgctgctgcggttgatggcggcatggttgctttccgagtctcactgttttgctgtgctgccgaccaactgcactgcaatatgccgtttgcagtcttcattttcaagagggttcttttagtttgtatgagcctttcaattacgtttctgtgcgattgtatgtgtaatgttctagcagcagtcatcgattataggttccattgtttaaatcctgctcacatagtcacatattttgatgcagaaattcagttaaaatgaatcaatgctgttatagctggctgtcttttttttatctataaagatatactaccaaattgttctttgttaattcttatttctttgccaggtttcataagcatcgactgtggatatactgcaaccccgagttacaccgatactgtggatatactgcaaccccgagttacaccgataccaacacaagtataacatatgtgggcgatgaaggttttatagaagcaggcataaaccacaatgtagaccttaacaacttgcagcagacagatcttgcacggcgatactcaaccatccgtttctttcccaatggaacgcgcaattgttacacgttcaagtccctaacaccaggtagcaagtgtaaaatcaaaggtgtttttgattattattttgtgatgaacaattggcatcggagattattggttttgttatttggaatttattcacgaagtggttttggagatgattggatttataggtgaattacaggtgctgtcattttatgtgaccggtcagacagggctctggtagctggtcagaccggcgtgtattgcgcggttagactggcgcagcccgcggtctgaccggtcgacgctgtgtcggtttcggtttcgggttgtttatttggatatccgtgattatttcatgattatgacttctagatggatactatacgtatgtaatactgttgtttgctactaatgagttaagttggagatagcttggtctcggaatatggtttctttgtttatttcatgtgtaggtgactcgatgtctcgggagagtatttgcggtgatggactgggagtcggcttggggataagacgacgtccgtggtggtcagagatcatgcgggatacttaggctagagttgatgcacgtggttgatggagattccatatggcatacgatggagttattgtgtgcgtatgggatgcggagtcgaatttggaaggagtccaaatttggtacgattggttatgtaaagtttctttcttgtactagagggtttcctaaggtgtttaggactcctagtatgagtttggtttgtggctttaggctgcctacctcgggtataaatagagggggagcttgaggcttcccggtatcgtttttgagagcaattgagttgagtttttagttagggtttcgagtttagtcgaaatttttgtaaggagtgctattggtgcactttgtaaacacagaaagaatcaataaagtcgtcatctactttaagagttattcgatttgtatttaccgggtttcggcggtctaaccgacgatataccagcggtcaaaccggtggtggcgaggcagtcagaccggcggcggcgacagcaagcggcagctgatcttggcggtcagaacggagatctaaactcggtcagaccgacggcaaccaggcggtcagaccggcagggcaacttcggtcagaccgcgatccgtcgaatttgagggtaacttttatttccgctaaaagttttcggtttttgggtataccaatcattcacccccctctggttggcttagttattgtgattcgatcctacagcaagtacttgctgagggctgcctttggctatgggaactatgataggataaacaggctccctacctttgatctctacctaggggtgaactactggacaacagtaaggattgtcaatgccagtacagcatatgtgtttgagattatcgcggtgtccccagccgactatttgcaagtttgtttggtgaactcctttcatttcagggcttgacttgaggccattccaggaaaaaatttatccaggttccaatatgacgcatgctctagtcttgctcagcttcttccgtaacacggtcaaattcgggcccaatcgctaccactttggaactgatgatcatcaaatcaggtaactattcatgcaatgctttgctatgcaatttttctttgacttatgcgtttacctgctcgatgttcttcttaatctataaggttcccagatgatccccgcgataggatatggcagaagtatgaagatgtctcagaatggacggatgtgccagataccgtcaatgggatagtccagaactctcccaacgatacatacaacgtgccatctgcagtgatgcgcagtgtatccactccgttgaatgattcaagaatggacctgtcatggagttcagattcttccatgaacgttgacattgccaccaagttctttgttgttctgtattttgctgaggtggaggccatccaagggaatgcattgcgtcaatttgatattattctggataataacacattagttagtgcattcagtccaatctccatgatgactagtgttttctcgggcattgttcaaggttctggcagtcatggcatctcccttgtggcgacatcaatctccaatcttccgcctttgattagcgcaatggagatattcgtggtgcgcccactgaatgaatcttccacttattctgaagacggtatataatatgaccttgagaactttcatatttgtttcgtctgtccacatgttactgtgagtgtcatattcgctatcaagataagattcaaactaactaatgtctatttgccatcaaaatacaaacagctatcttgttttcggtatgcagttgtttggggctggagcaccttgtgatcagaactgtatatagacattatttatcagtgctctgaaactgatgtatataacttacttacattattatggaactcaaatagttgatcttatgttaatgtatctaccattggggccaattttgaactgaattagattcagcatgcacggaatcttcattattgagtggttgattttctttctatttatctttgctatcttcagcacattctatgatgatcatccagacaaagttttctgtgaagagaaactgggcaggtgatccatgctccccggcaaccttttcatgggatgacttgaactgcagttacactccccatggtccaccaagaataactggcttgtgagttctgaatgaacaagataactcaattacatgctgtgataaaatgcatggataaaacattgagttgtagtgttcaatttatgtgatgatggtttaagtttcctgcagatatatgtcatctagtggattgactggtgaacttgatgcttcgtttggtcagctgacttagctccaacacctgtatgttttgtatagtacgatttcagactttccatgttataataatacctcttgcattactgtttagccactagtgcttgttgacttgctttttttttgaagtaatttactgcaggggaagcccccacagtatattcttattattaatcatagaagttacaaacaagtagattacaagttggaaatccacaaaggaagactatccctatctgaatcctttagtctatgaagtaaaagcaagagatcacatttaagagtattcttccaggaaaccctcagaaatagctgtattcctctgtttccaattatgccaggctgcatacagagttttctccataaataaagtaccagtatattggtgttgcatcaatgcatcattatcagcatatcatcaaagagtagagaagtgtcccagttacaaccagtggatatccaacagcttctactaaaagagcactgaaagaagaaatgacttagagtttctctaatattctgaccacaaagcacacaagtgagaggtactccttgaggagcacaatgtttcctgtctaacatatctcttgtatttaatctatcaatcaacaaaagccaaccaaaaaccttaattttcattgtacacttgctctcccatatccagtgcaagtaagatggcatgtacatgaataaaatttagggcataatttttctgagaagagaagatatcatttccccatatatataactccatgtatcagtatcaattgttgttgacttgcattggtcccataaattactaaaatgtcttattctcatttgagtaatgactcaagtataatcataaactctttactcttctataatcctaaaggctccatcgaactataatttttatatttaatttgtagtctctattcttattagtttcacctgttcatacttcatatgttgtaagaattaattctcgagttcagtactaattgtactttagttgattctaaagaactatcttactctaaatgtttaaaatgttcaagacacaagcatttaatatctcgcaatccttcaggatttctttgtaagtgcttcatgttactgtccattttcagggatctatctcacaacaatctgtcgggacctatacctgattttctgggccaagtgccatcgctgatatttctgtaagtcttcctggtgatcaaactacattctgcaaacatcaaagcacatgaggcctctttatctttatccctcattttcatagagatttatcaagcaacaacttcagtggatcaatcccaactaatcttctacaaaagtctcaggaaggattactgacactaaggttagcacagccgggacatgtttggcttttttatttggtagttccgtcactttataaacgcaattaataactgtaaaaatacagtaataccttcaagaatagcatttatactttggtttgtttatttcaatctgtatatcctgtattttagcattttgttcacatatatcttaaagttggtgatagttttgtcgctcattttagttgaggcattaatatccttcaggtgatatacttgaaatccattataccagtacaccatattatcctgacttgtttacataagtttaatgatttatgttatgcatgattatcaatattgaaaggaaagcgcactttcatggaaaatatcactcaagtctctcagaacttcagttgtgtttgaatggattcttgtctttcattcataagctagatactaatgttcaaatcacttttgtcaaccatgagaatcctaaggccctgttatgccactatcatggtatcgcctcgagcagtgacatatgaactgccttgcgctataccactgagatgtaccttatttctaactcaatgaaagtatgaagggatctgacaagacctaattccttacttccaatatattgcaatctgaccaatcatattttgttcttttaggaccgagaataatccgaatctttgtggaactgacaaatgcgatctgattctgaatcaaagcaagagaaagacaaaacttgtgcttgaggttgttcccccagtcgtacttgtgtttgtagttctacttatacttgctatattttggtactgcagaaagaagagaccaggtaactaaatgaatgtacataaagaagagaattttagcttcactatgagaatgtagcgtatgcttctcttccagttgatattatactcatgtgaccagcagatgttactggtgcaactaatccatttgagaaccggagattcaagtacaaggaactcaagctcatcgcagatagtttcaaaaccataattggaaggggtgggtttggtcctgtataccttggctatctagagaatggaactcccgttgctgtgaagatgagatcacaaacatctaatcaagggaaaacagagtttttggctgaggtacacatacattactctgccaatacaatggactacaagaagttattgatcattggattatacaattgtgtgtagttagaactgatgaattaaaagtatagtaatttatcaattatcataaatttcttggaattctcatttgttgtattacaggctcagcacttagccagggtccatcacagaaacctggtgtcattaataggctattgcaacgataagaaacatctagcccttgtgtatgagtacatggatgggggaagcctagcagaccacttgagaggtttgcagaactttacctcagaagccgatttttcattattgtaaagataagcctcatattgcagattccatgatttctttttcacaggtcaagaagatcttcacactgaacccctcacttggttgcaacgccttaacattgcgttggactctgccaatggtaaccaacaagcttcgaagtttttctttctctctttcgataatacgggctgatatctgtatattgacctgaatgcccctcttaataatacttcaaattttcagcattatgatcatttatccatatctgatgttttattttttaactattcatgcatgtaggactggaatacctgcacaggtcctgcagtccaccattgatccatagagatgtgaaggcccacaacatccttcttactgcaaatttcaaggcaaagatttcagatttcggcctgacaagggctttcagcagtgagacgaacacacactctacaaccgaaccagcgggtgtaggatcgaatagcaagaactaa</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0518400, RefSeq:Os08g0518400