Os08g0529200

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Revision as of 13:09, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0529200| Description = CBS domain containing protein| Version = NM_001068854.1 GI:115477446 GeneID:4346118| Length = 2354 bp| Definition =...")
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Gene Name

Os08g0529200

Description

CBS domain containing protein

Version

NM_001068854.1 GI:115477446 GeneID:4346118

Length

2354 bp

Definition

Oryza sativa Japonica Group Os08g0529200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26432875..26435228

Sequence Coding Region

26432875..26433787,26434885..26435228

Expression

GEO Profiles:Os08g0529200

Genome Context

<gbrowseImage1> name=NC_008401:26432875..26435228 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:26432875..26435228 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcccacatcgtcttcctccgcgcctccgccgccgacctcaccgccggcaagccgccgctggcgggcgtcccggcgtccgcgccgctctccgcggcggccgcggccatcccggcgtcgtccgaggccgccgtggccgtctggcgcgtcgacggcgcctcccaccaccaccaccaccgggcgcccaccgcggcggccaccgtcgtcggcctgctcagctccatcgacgtcgtcgccttcctcgccaaccaccccggcggcgccgccgccgcgttcatgacccccgccggcgacgtcgtgccccacgaacacgccctcgtgcgccaggtccagcccgacacgagattgatagaaatagtggagttgatgaagcagggagcgaggcgagtgctggttggcaagaacatcaaggaaggatgcgccatcaacaagcagccattcgcgcccttctacaaggccgtgctcaagatcaccgggacgccgcggcggaatccgtcgccgtcgccgtcgccggccaccaggtcgccgtcgacgacgttgggccgcgacagatactgctgcctcacgcgggaggacatcgtgcgcttcctcatcaactgcctcggcgcgctcgcccccatcccgatgcaatccatcgcctccctcggcgcgatcagccgcgcctactcccacgtcgaggactcctcccccgccattggcgccgcctgggagctcccctccgacccgcgcgccgtcgccgtcgtgcggactggccacgacggctcgcgggtgattcttggcgagatctccggccacaagctgtggaagaaagactacgcggccgccgcggaggcgatggcgaccatgtcggcgatggacttcgccaccggcgtcgacgagagcgggccgtcgcctaccgccaccgccgccgccgccgctggcaatgtcggcggcggcggcgcgcgtgcgcggatggggagcgtcgaggaggagatcgcgcctgtgccgaggctgacgaggttcagcagcaggaagatcgggttctcggcgagcttggcgaacatgatcatggtgagccaccggaagaaccgggtgctgacctgcaaggcgacgagctcgctcgccgccgtcatggcgcagatgctgtcgcacagggccacgcatctctgggtcgtcgaggatggcgacgccgacaaaggcgccgtcttggttggcatgattgggtacatggagatcctcagggcggtcactagaggtgttgttgtccctccggcttga</cdnaseq>

Protein Sequence

<aaseq>MAHIVFLRASAADLTAGKPPLAGVPASAPLSAAAAAIPASSEAA VAVWRVDGASHHHHHRAPTAAATVVGLLSSIDVVAFLANHPGGAAAAFMTPAGDVVPH EHALVRQVQPDTRLIEIVELMKQGARRVLVGKNIKEGCAINKQPFAPFYKAVLKITGT PRRNPSPSPSPATRSPSTTLGRDRYCCLTREDIVRFLINCLGALAPIPMQSIASLGAI SRAYSHVEDSSPAIGAAWELPSDPRAVAVVRTGHDGSRVILGEISGHKLWKKDYAAAA EAMATMSAMDFATGVDESGPSPTATAAAAAGNVGGGGARARMGSVEEEIAPVPRLTRF SSRKIGFSASLANMIMVSHRKNRVLTCKATSSLAAVMAQMLSHRATHLWVVEDGDADK GAVLVGMIGYMEILRAVTRGVVVPPA</aaseq>

Gene Sequence

<dnaseqindica>1442..2354#1..344#atggcccacatcgtcttcctccgcgcctccgccgccgacctcaccgccggcaagccgccgctggcgggcgtcccggcgtccgcgccgctctccgcggcggccgcggccatcccggcgtcgtccgaggccgccgtggccgtctggcgcgtcgacggcgcctcccaccaccaccaccaccgggcgcccaccgcggcggccaccgtcgtcggcctgctcagctccatcgacgtcgtcgccttcctcgccaaccaccccggcggcgccgccgccgcgttcatgacccccgccggcgacgtcgtgccccacgaacacgccctcgtgcgccaggtccagcccgacacgaggtcaccatcaattcatgatctagatatcctgcattgcaatgcatccatgagataattgcgactatggccttgtttagttacacggttcaaaagttttagcgtgtcatatcaaatatacggacatatatttggagtattaaatatagactaataacaaaacaatagatttcgtctgtaaactacgagacaaatttattgagtctaattaatccatcattagcaaatattccctctgtttctaaatatttgacgccgttgactttttaaaacatgtttgaccgttcgtcttattcaaaaattttaagtaattgttaatactttttctatcatttaattcattattaaatatacttttatatatacatataattttacatatttcacaaaagtttttgaataagatgaatggtcaaacatatgctaaaaagtcaacattgtcaaatatttagaaatggagggagggggatggattctaatagctcgagtggacgtccacccatttattgcatgtcaactaaatggctacgaaaaattttcaaaaaaattggcaagatagatcaatatgtaatatatcactccacaaacatgcaagttaaaattcaacttctacaagttgtaacaaaaataacaaatttaactgtaaatatacatatagtaatttgagttttgtttgttatttttattacaatctgtagaagttgaattttaacttgcatgtttgtggattgatacattacatattgatctatcttattcatatttttttaatttttttcataaccatttagatgacatgcaataaacgggtggacatccactcgagctgttaaaatagtttcccatggaggcgacatccactcgagctgttaaaatagtttctcatggagggagtatttactgtagcaacacactgtcaaatcatagagtaattgggcttaaaagtttcgtctcacaatttacacacaatctgtataattagttttattgtctatatttaatactctatgcatgtgtccaaacattcgatatcacagggtaaaaaaattttacatgggaactaaacatggcctatatttttgtgattttttgtgatgaagattgatagaaatagtggagttgatgaagcagggagcgaggcgagtgctggttggcaagaacatcaaggaaggatgcgccatcaacaagcagccattcgcgcccttctacaaggccgtgctcaagatcaccgggacgccgcggcggaatccgtcgccgtcgccgtcgccggccaccaggtcgccgtcgacgacgttgggccgcgacagatactgctgcctcacgcgggaggacatcgtgcgcttcctcatcaactgcctcggcgcgctcgcccccatcccgatgcaatccatcgcctccctcggcgcgatcagccgcgcctactcccacgtcgaggactcctcccccgccattggcgccgcctgggagctcccctccgacccgcgcgccgtcgccgtcgtgcggactggccacgacggctcgcgggtgattcttggcgagatctccggccacaagctgtggaagaaagactacgcggccgccgcggaggcgatggcgaccatgtcggcgatggacttcgccaccggcgtcgacgagagcgggccgtcgcctaccgccaccgccgccgccgccgctggcaatgtcggcggcggcggcgcgcgtgcgcggatggggagcgtcgaggaggagatcgcgcctgtgccgaggctgacgaggttcagcagcaggaagatcgggttctcggcgagcttggcgaacatgatcatggtgagccaccggaagaaccgggtgctgacctgcaaggcgacgagctcgctcgccgccgtcatggcgcagatgctgtcgcacagggccacgcatctctgggtcgtcgaggatggcgacgccgacaaaggcgccgtcttggttggcatgattgggtacatggagatcctcagggcggtcactagaggtgttgttgtccctccggcttga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0529200, RefSeq:Os08g0529200