Os08g0530300

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Revision as of 13:09, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0530300| Description = Exo70 exocyst complex subunit family protein| Version = NM_001068860.2 GI:297608884 GeneID:4346124| Length = 2272 bp...")
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Gene Name

Os08g0530300

Description

Exo70 exocyst complex subunit family protein

Version

NM_001068860.2 GI:297608884 GeneID:4346124

Length

2272 bp

Definition

Oryza sativa Japonica Group Os08g0530300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26501746..26504017

Sequence Coding Region

26501957..26503777

Expression

GEO Profiles:Os08g0530300

Genome Context

<gbrowseImage1> name=NC_008401:26501746..26504017 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:26501746..26504017 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggacggcgcgcgggacgccgtggtggaggtcgcgaagcacatggggaagagcctcgcggtgtccaagaacgcggccgatgacatgatgcgcgttctgtccaggtacgaaggtgaggcgcccatgttccccttgtcacatccggaggtggatcaggcggaggaggaggaggtgttcgcggcggcggaggacatcatccgccggtgcaactcggtgtcgtcgccgtccgagatggttgattatctttacgccgtggacgacgcgatcgccgcgacggcgctccagggcgagctggcgtcccgcgccgcggagaccgtgcaggccgccatgccgcggctcgaggaggaggtgcgcgcgctgctgggctcctccgcgcggcgcctctcgctcgactcgttcgaggacctcgacgacgcgggcgcggcgacgacccccgacgggtcgccgccgcgccgcgacgcgctctcgccggaggcggccgcctccgccagcggcgtcgcggaccgcatgctgcgcgccgggtacggcccggagctcgcgcaggtgtacgtcgccgtccgccgcgacgcgctcgcggagtccgcggcgcacctcggcgtcgaggccgtcgccatcgaggaggtgctcaggatggagtggggggtgctcaaccagaggatacggcggtggagccacgccgtcagagccgtggtcaagaccctcctcgccggcgagcgccgcctctgcgacgaggtgttcgcctccgacgaggagctcggccacgagtgcttcgccgacgtcgccaggggctgcctcctgcagctcatcggcttcgcggacgccgtcgccatgtccaccccggcgacggagaagctctaccgcatgctcggcatgtacgaggcgctcaccgccgtcgagccggacattgaatccctcttcaccggagacgcccgcgacttcttctcctccgaggtcgccggcgtcgcggcgcagctgggcagcaccatccgccacacgatcgaccagttcgtcaacgtcatccacggcgagtcgtcgcggcgaccagtcctcggcggcgagatccaccccatgacacgctacgtgctcaactactgcggcctcctcgccgagtgccgcgtcacgctcgacatggtcctcgccgacaacaacaccagcaaccacgacaccaacgacgacgaccacgacggcggcggcggcggtggcgcctcgtcgacgccgtcggggcggtgcatgagggagatcctcacccacctcctccgcaacctcgacgagaaatcgaggctctacgacgacgccgggctgaagaacatcttcctcatgaacaacatctactacatcgtgcagaagatgatggtggagttcccggcgctgcgcgagctcctcggcgacgactgggtgcgccgccaccgcggccagatcaggcagtacgagacaggctacctccgggcgtcgtggatgtccgtgctggcctcgctccgcgacgacgcctcgccggcggcggcgcacgggcacggcggcagggcggcgctgaaggagaaggcgaggagcttcaacgcggcgttcgaggagctgtaccggagccagacggcgtggaaggtgaccgacccgcagctccgggaggagctccggatcgccgtgtcggagcggctcatcccggcgtaccgctcgttcgtcggccggtcgaggcagctgctggagtccggcagcagcagcggccgccactcctcgtcggcggcgaagcacatcaagtacagcctcgaggatctcgaggactacatgctcgatttcttcgaaggcgttcagaagttcgtcaggtga</cdnaseq>

Protein Sequence

<aaseq>MADGARDAVVEVAKHMGKSLAVSKNAADDMMRVLSRYEGEAPMF PLSHPEVDQAEEEEVFAAAEDIIRRCNSVSSPSEMVDYLYAVDDAIAATALQGELASR AAETVQAAMPRLEEEVRALLGSSARRLSLDSFEDLDDAGAATTPDGSPPRRDALSPEA AASASGVADRMLRAGYGPELAQVYVAVRRDALAESAAHLGVEAVAIEEVLRMEWGVLN QRIRRWSHAVRAVVKTLLAGERRLCDEVFASDEELGHECFADVARGCLLQLIGFADAV AMSTPATEKLYRMLGMYEALTAVEPDIESLFTGDARDFFSSEVAGVAAQLGSTIRHTI DQFVNVIHGESSRRPVLGGEIHPMTRYVLNYCGLLAECRVTLDMVLADNNTSNHDTND DDHDGGGGGGASSTPSGRCMREILTHLLRNLDEKSRLYDDAGLKNIFLMNNIYYIVQK MMVEFPALRELLGDDWVRRHRGQIRQYETGYLRASWMSVLASLRDDASPAAAHGHGGR AALKEKARSFNAAFEELYRSQTAWKVTDPQLREELRIAVSERLIPAYRSFVGRSRQLL ESGSSSGRHSSSAAKHIKYSLEDLEDYMLDFFEGVQKFVR</aaseq>

Gene Sequence

<dnaseqindica>212..2032#gtggaaattgtccgaggacgccgagcaaagcaaagcagcacgagcggcgcgtttggttggtcgcgtcgcgctgcacagcacccggtctttgaaagctaccacccggcgcgcgcgcgcgcccgcgacgacgacgaacaccaccaccaagaagctctctctctctctctctcctttgcttctcctctaggcgattgctgcgtcgacgacggccatggcggacggcgcgcgggacgccgtggtggaggtcgcgaagcacatggggaagagcctcgcggtgtccaagaacgcggccgatgacatgatgcgcgttctgtccaggtacgaaggtgaggcgcccatgttccccttgtcacatccggaggtggatcaggcggaggaggaggaggtgttcgcggcggcggaggacatcatccgccggtgcaactcggtgtcgtcgccgtccgagatggttgattatctttacgccgtggacgacgcgatcgccgcgacggcgctccagggcgagctggcgtcccgcgccgcggagaccgtgcaggccgccatgccgcggctcgaggaggaggtgcgcgcgctgctgggctcctccgcgcggcgcctctcgctcgactcgttcgaggacctcgacgacgcgggcgcggcgacgacccccgacgggtcgccgccgcgccgcgacgcgctctcgccggaggcggccgcctccgccagcggcgtcgcggaccgcatgctgcgcgccgggtacggcccggagctcgcgcaggtgtacgtcgccgtccgccgcgacgcgctcgcggagtccgcggcgcacctcggcgtcgaggccgtcgccatcgaggaggtgctcaggatggagtggggggtgctcaaccagaggatacggcggtggagccacgccgtcagagccgtggtcaagaccctcctcgccggcgagcgccgcctctgcgacgaggtgttcgcctccgacgaggagctcggccacgagtgcttcgccgacgtcgccaggggctgcctcctgcagctcatcggcttcgcggacgccgtcgccatgtccaccccggcgacggagaagctctaccgcatgctcggcatgtacgaggcgctcaccgccgtcgagccggacattgaatccctcttcaccggagacgcccgcgacttcttctcctccgaggtcgccggcgtcgcggcgcagctgggcagcaccatccgccacacgatcgaccagttcgtcaacgtcatccacggcgagtcgtcgcggcgaccagtcctcggcggcgagatccaccccatgacacgctacgtgctcaactactgcggcctcctcgccgagtgccgcgtcacgctcgacatggtcctcgccgacaacaacaccagcaaccacgacaccaacgacgacgaccacgacggcggcggcggcggtggcgcctcgtcgacgccgtcggggcggtgcatgagggagatcctcacccacctcctccgcaacctcgacgagaaatcgaggctctacgacgacgccgggctgaagaacatcttcctcatgaacaacatctactacatcgtgcagaagatgatggtggagttcccggcgctgcgcgagctcctcggcgacgactgggtgcgccgccaccgcggccagatcaggcagtacgagacaggctacctccgggcgtcgtggatgtccgtgctggcctcgctccgcgacgacgcctcgccggcggcggcgcacgggcacggcggcagggcggcgctgaaggagaaggcgaggagcttcaacgcggcgttcgaggagctgtaccggagccagacggcgtggaaggtgaccgacccgcagctccgggaggagctccggatcgccgtgtcggagcggctcatcccggcgtaccgctcgttcgtcggccggtcgaggcagctgctggagtccggcagcagcagcggccgccactcctcgtcggcggcgaagcacatcaagtacagcctcgaggatctcgaggactacatgctcgatttcttcgaaggcgttcagaagttcgtcaggtgatcacaaattcagagtttcgcagaattttctgagagtttcagaatttcacagattcagagtttcagatatttcagagcagaggagctctgcttgacttgtagagattcagagtttcagagaatcaaaagaacaaagtactccattgcgtagccaatgcttatagttgtagctattgattgctgatcgaatctagcttatgcttaatgttcaatattgttcaagataagaatgtaaatacat</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0530300, RefSeq:Os08g0530300