Os08g0531300

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Revision as of 13:09, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0531300| Description = Sua5/YciO/YrdC/YwlC domain containing protein| Version = NM_001068868.1 GI:115477474 GeneID:4346132| Length = 3281 b...")
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Gene Name

Os08g0531300

Description

Sua5/YciO/YrdC/YwlC domain containing protein

Version

NM_001068868.1 GI:115477474 GeneID:4346132

Length

3281 bp

Definition

Oryza sativa Japonica Group Os08g0531300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26552498..26555778

Sequence Coding Region

26552523..26552729,26552847..26552968,26553487..26553540,26553637..26553659,26553790..26553914
,26553993..26554156,26554527..26554596,26555144..26555242,26555524..26555601

Expression

GEO Profiles:Os08g0531300

Genome Context

<gbrowseImage1> name=NC_008401:26552498..26555778 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:26552498..26555778 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaccgccaccgccacggcgaccgccgccgccgccgccgcgtcctcctcgcgcctccccttccgccgcgccgcctcctcctcctcctcctcgcagctccgcctccccgcggtgcctcctccccaccgcgcctccttcgccgtcgtcgccctccacaagcgcaaccccaagcggctcaagtacgcctcccagcgccagttcacgagaggggatgccgggatgctgcgggtgcaggtggagccatccggcgaggacgcgtggaagctggagcccgtcgtcgaactcatcaaccgcggcgccgtcggcatcatccctaccgacaccgtctactccatcgtctgtgatctcagtaacaatgactctgtcgagcgccttcgcaggatcaaaggcattggagattcaaagcctctcagcatcttgtgccgctcgctacgagacattgatacctacacaaccggatttcctcgaggcactaaccaagggcaagctaacatatttcgtgctgtcaagcgtgtaatacctgggccttacacctttattttacctgcaaccaaggaattgcccaaacaatgcataaggcatggatcatctactaggtacgcgaaaaggaggcaggttggtgtccgacttccagatgaccccatatgtgaagcaatattgcaaaatcttgatgagcctttgatctgcacaagtgtcaaatctctgtcagaggatgaatggatacttgacccggttatcattgctgatatatatgagcaacagggccttgatttcattgtcgatggaggtactagaattgctgacccgtctactgtggttgatatgacgggaagctaccctaccatcattcgtcagggaaagggccctaagctagattggatggtagcggaagatgaggaacaagagtcgcgaccaacatttgcgtataaagcagcttga</cdnaseq>

Protein Sequence

<aaseq>MATATATATAAAAAASSSRLPFRRAASSSSSSQLRLPAVPPPHR ASFAVVALHKRNPKRLKYASQRQFTRGDAGMLRVQVEPSGEDAWKLEPVVELINRGAV GIIPTDTVYSIVCDLSNNDSVERLRRIKGIGDSKPLSILCRSLRDIDTYTTGFPRGTN QGQANIFRAVKRVIPGPYTFILPATKELPKQCIRHGSSTRYAKRRQVGVRLPDDPICE AILQNLDEPLICTSVKSLSEDEWILDPVIIADIYEQQGLDFIVDGGTRIADPSTVVDM TGSYPTIIRQGKGPKLDWMVAEDEEQESRPTFAYKAA</aaseq>

Gene Sequence

<dnaseqindica>26..232#350..471#990..1043#1140..1162#1293..1417#1496..1659#2030..2099#2647..2745#3027..3104#cccaacccaaccccgaccctctccgatggccaccgccaccgccacggcgaccgccgccgccgccgccgcgtcctcctcgcgcctccccttccgccgcgccgcctcctcctcctcctcctcgcagctccgcctccccgcggtgcctcctccccaccgcgcctccttcgccgtcgtcgccctccacaagcgcaaccccaagcggctcaagtacgcctcccagcgccagttcacggtactctctctctctctctctctctatccgctgctcgtcgccgtcgcggctaactccagtgtgctgaacttgtgttgtggtggtggtggtgattggtgggggtgggggcgtgtgtagagaggggatgccgggatgctgcgggtgcaggtggagccatccggcgaggacgcgtggaagctggagcccgtcgtcgaactcatcaaccgcggcgccgtcggcatcatccctaccgacaccgtgtacgcccaccgctttcagtctcaccgcgtgttcgtctggttgctttgcttgtctaggagtctgccactgtctagtttagtgaggtggcgttccgcgactttgcagaattgcggttgatagttgatacccacggtgcacccgtttaagtgtatgcttggcttggcaatgggcagacgccggcaatatctgaataacttatctgcaaatgttgtcatttaagcctttcatttccactcaatattaagtatggcatgcccattcaagtacatgctcgtcaatgggcagacacagcaatctctgaatagtttctctgcaaatgttgtgatttaagccttgatttccactcaaaatcaacttatagaagactgatagtagtagcttgcattggtcctaattcgttgtgcgttttgtttgaccatatttagatacataaatgtgctgttgaattttccatctcttattgttttgcataatgcactgggaacataaataatacctatagtatcattttttccagctactccatcgtctgtgatctcagtaacaatgactctgtcgagcgccttcgcaggtacaactgagcctttgatctgttagtatgttgaataacagaagcaagcatgcatttcagttctaacggggatttgtgatttgttatcttgttcaggatcaaaggcattggagattcaaaggcaagatatgcaaagacgtaaaaaatgtttttgtacgagtttgatgattattctcaagcaaaacacaacctgggagcagttcctcctacttgtagattctgtgtatttataccagttctgaattgtgcagcctctcagcatcttgtgccgctcgctacgagacattgatacctacacaaccggatttcctcgaggcactaaccaagggcaagctaacatatttcgtgctgtcaagcgtgtaatacctgggcctgtaagcatatcttcttttcacccttggccatagttttgtagtacttcacaaatgacctgtttatttaatcctgtgcagtacacctttattttacctgcaaccaaggaattgcccaaacaatgcataaggcatggatcatctactaggtacgcgaaaaggaggcaggttggtgtccgacttccagatgaccccatatgtgaagcaatattgcaaaatcttgatgagcctttgatctgcacaaggttggtctaggctgtaactacctttttttatttactttatttgtttcctgctctatgtagtgacatgctgtgttatattgctgaattataataccatcaaatagtttggagaaagtactttattttttctgctggcatgtttgaacattcacaatactatatcgtgcatatgtacctctctgttttggtcttgtcagttaaaaacgaacggagatttcttgtgctctcttttttttagtaatttctggagcttaggtttctttagcgtttgaaaggaatgaggaattgataatgatcgagatgtcgtgttatcaacttttctttcttaaacaatatactcatagtcatactccttttcctgtatttacagtgtcaaatctctgtcagaggatgaatggatacttgacccggttatcattgctgatatatatgagcaacaggtatatatcttcacttccatcaatacactagaaactatgcacattatgatcttattaaaagagcttttgtgtatcaatggcgttacactttccactgtattgatcttttaaagagtgtcatttgttgttttcttataaagaattataggtgatattgttattagtacatgctgacccgttattgtagatttcatagttatcatctactaggctttttatacaagttgtctctatgatctgctctgcagctctggcttgtatggtagtaactgaagcaaaaagtcctgacttacaaaacaattgtgggtgtgactctgttagttgcagttgctggctattttcacatgaagctattttttactaaatatgattgatgtaattatatgtaaaaaggtaaaaattgtaacgaactgcttggaatgtctagtaaaactatcatagcgtccattctgcgttactttgatgtgcagttgtgtacccattcctgggtcatgctgaaacacaaattggcgtgatacgcttcattaattggtgattccattttcagggccttgatttcattgtcgatggaggtactagaattgctgacccgtctactgtggttgatatgacgggaagctaccctaccatcattcgtcagggaaaggtatgcattttcattaatggactaaagttatcctaccatatgactatactatcaagcaaaaggaaatttctcattctatcccctgacatttggcaaatgatatgtactgcatttaaacacaccgttatgtattatctcgtaatgcttatctatttcatatttgtgacctatttcgttgacttatgattggcataattagctaatactggatgcttcaactgcattttatgcggtttgtataaatgcacagaggcccttatgtcttccttttcctgctttagggccctaagctagattggatggtagcggaagatgaggaacaagagtcgcgaccaacatttgcgtataaagcagcttgagtcactcttcggctgtcctatcataggaggttgtaaacttgtaattacttcaccagagcctggtcttttgactcctgaatctgctactctcagctagaccagtatatatactacatgttgtaaatatgccagggaatgtaaccaggaatcgacatagttcaccagattattttcagt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0531300, RefSeq:Os08g0531300