Os08g0546900

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Revision as of 13:11, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0546900| Description = NC domain containing protein| Version = NM_001068959.2 GI:297608941 GeneID:4346230| Length = 2781 bp| Definition = ...")
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Gene Name

Os08g0546900

Description

NC domain containing protein

Version

NM_001068959.2 GI:297608941 GeneID:4346230

Length

2781 bp

Definition

Oryza sativa Japonica Group Os08g0546900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27481309..27484089

Sequence Coding Region

27481527..27482293,27483878..27483971

Expression

GEO Profiles:Os08g0546900

Genome Context

<gbrowseImage1> name=NC_008401:27481309..27484089 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27481309..27484089 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggctgctgtcgcaccgcgtggagcggtcggagatgaagcccggcgaccacatctacacatggcgcgccgcctacacctactcccaccacgggatttacgttggagggagcaaggtggtgcatttcacgaggaagaaggaggcagggacggcaggtctggactcggcgatcgccatctccagcctcctctcgcagggctcgccggagtgccccaccttcccggactgcggcttccagctcccggacagcggcgtcgtcctcacctgcgtcgactgcttcctccgcggcggctccctccacggcttcgagtacggcgtcccgccggcggtgttcctcgccaagctccgcggcggcacctgcaccaccgccgccgccgacccgccggacgccgtcgtccgccgcgccatgcacctgctccagaacgggttcggcagctacgacgtgttcgagaacaactgcgaggacttcgcgctctactgcaagacgggcctcctccccgccgacgagccgggcagcatcggccggagcggccaggcgtcgtcggcgatcggcgtcccgctggcggcgctcctctccacgccgttcaagctgctcgccgccggccccctcggcatggccgccgtcaccgccgggatgtactgcgccggcaggtacatcaccgacatcggggtgaggaaggacgtcgtcaaggtggaggtggagaacctgtcggcgcatcttggctggcgtcgcgccaaagccgaggaagaaatggccatgaaaaaacagcagccttcatcacatgatactaaggtcaagaagagtttacttcctctcaagagaaaacgtgacaatttctgcgaaattattacgagctga</cdnaseq>

Protein Sequence

<aaseq>MGLLSHRVERSEMKPGDHIYTWRAAYTYSHHGIYVGGSKVVHFT RKKEAGTAGLDSAIAISSLLSQGSPECPTFPDCGFQLPDSGVVLTCVDCFLRGGSLHG FEYGVPPAVFLAKLRGGTCTTAAADPPDAVVRRAMHLLQNGFGSYDVFENNCEDFALY CKTGLLPADEPGSIGRSGQASSAIGVPLAALLSTPFKLLAAGPLGMAAVTAGMYCAGR YITDIGVRKDVVKVEVENLSAHLGWRRAKAEEEMAMKKQQPSSHDTKVKKSLLPLKRK RDNFCEIITS</aaseq>

Gene Sequence

<dnaseqindica>1797..2563#119..212#gatagcgacattattcttcctctcaccttgccccttcacactcgtcactcgctccaaccagccgcctgagctctctcgccgtacgtcggcgctccatcggccggaattatcggcggcgatggggctgctgtcgcaccgcgtggagcggtcggagatgaagcccggcgaccacatctacacatggcgcgccgcctacacctactcccaccacggtacgtccctctgtcgatcgccggcgccattgccatttgccgacgctcccgtttcaattcgctcgccttccaaacccatctgaattatgcgagtttttttccggcaatctagccatatcccgtgcgacctcaatcgccggcgccattgccatgtgcttgcgcttccgtttcgccctccgaaccatgtgaattacgccgagtttttctttctggcaatctagttaattagcttccgagcaggcaagcattttcagtttccaggggttatgagatcagaattcccttgctcttcttctatactctgtagatgctgctgctgctgtgatacttccagcaaaatttttcagtgaatcgctgctgcaaattatttgctaggccggcattgtaacctgcactttccagttcagtgatcatcgatcgcatctgcagtcatcggagctgaatttttcgtgctaaagctgcgcaatgttatctccggtatgctgcttcactaatggatgattcgcactcctgccgcaaccaaatgttggttttacaaacatggttaggatatgatttaattacggttatatctaaccatatatattatccaagccccagttggctaattatttaattgatgactatttattactatctgctagatacccaataccaatccttgttaaccaccattcagtaagctgtgatcaaaggtgcctgcttttcttttaccatcactttgttaccaacacgcatcagcttcttccagctgcgttgccttacactctttttactttgcatctctcacttttacatgctccattgatttaatctctttattacttcaccgacgaacgacctttgatctctgcgattggaagaagcgtaaaggggctcgcctgtgtcgccgcttgctgctaccttccttcctggacggcatggggccggcgttctcgccatgagatttgcaggtgtttttgcttccgatcattggcatatgtagggcagcatcgacatggtggtggttgggtttctccacatgactgcctgcatccaaaagatgcggtgtgtttgcgagctacgatcgagtactgtgtctagtctgtcatttacaccttttgcaccccctccagcaatctctctggcctgtaaaatcttcgggtcagatcgatcaaaagaaaatcttaacttcagtaattgtcgcatgattaccatgctaactaagagtaattttattgtcggtactataggtatcacatcttctaaggtgaattttgatactacctctctcaataccttaggtatgactgaaagaaaatcttaacttcagtaaggaaaagtctatacatactaaattctgtctaactaaacacttattactaaaattgcgtgtcacattattttttttccgaatgtgtaaaagtcttgcacgccaaaatagtacatctagatttcttataacttccatctacttaaatcaaacggttgattacaacttaccattactgctttagttaaccgttagtatattacagaggattaaaacaacaaaaaaattctccttggagatcatgttgtgaacttgggtgttgcaatattcagggatttacgttggagggagcaaggtggtgcatttcacgaggaagaaggaggcagggacggcaggtctggactcggcgatcgccatctccagcctcctctcgcagggctcgccggagtgccccaccttcccggactgcggcttccagctcccggacagcggcgtcgtcctcacctgcgtcgactgcttcctccgcggcggctccctccacggcttcgagtacggcgtcccgccggcggtgttcctcgccaagctccgcggcggcacctgcaccaccgccgccgccgacccgccggacgccgtcgtccgccgcgccatgcacctgctccagaacgggttcggcagctacgacgtgttcgagaacaactgcgaggacttcgcgctctactgcaagacgggcctcctccccgccgacgagccgggcagcatcggccggagcggccaggcgtcgtcggcgatcggcgtcccgctggcggcgctcctctccacgccgttcaagctgctcgccgccggccccctcggcatggccgccgtcaccgccgggatgtactgcgccggcaggtacatcaccgacatcggggtgaggaaggacgtcgtcaaggtggaggtggagaacctgtcggcgcatcttggctggcgtcgcgccaaagccgaggaagaaatggccatgaaaaaacagcagccttcatcacatgatactaaggtcaagaagagtttacttcctctcaagagaaaacgtgacaatttctgcgaaattattacgagctgaaattctactacaatttgtatggttttgtgtggataggttttggagttaaaatgcaataagtcctggaaatatatgaagcgtcaagtgtgctttgatttaatcaagcattcgctgtctctgtgtgtgtgtgatagatagatcgatctgatcatgaattgggtgtgccaaggagattggattgctgtaccactatagtattatagtcagaaaatttactc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0546900, RefSeq:Os08g0546900