Os08g0550500

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Revision as of 13:11, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0550500| Description = Conserved hypothetical protein| Version = NM_001068982.1 GI:115477702 GeneID:4346255| Length = 2397 bp| Definition ...")
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Gene Name

Os08g0550500

Description

Conserved hypothetical protein

Version

NM_001068982.1 GI:115477702 GeneID:4346255

Length

2397 bp

Definition

Oryza sativa Japonica Group Os08g0550500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27700539..27702935

Sequence Coding Region

27700778..27701387,27701841..27702682

Expression

GEO Profiles:Os08g0550500

Genome Context

<gbrowseImage1> name=NC_008401:27700539..27702935 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27700539..27702935 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacaccaaggcaagcagcaccttctgtcactcagcgtgcttcagcatcaatccaagaaagaattagtggtgcccgtggcgctagtgatgatatgtttggaaaaacatcaagtgctgatcaaagcaacactccagccataccaaagcaaacaacagttcaaggagcaacccctgatgttcgtggtactagttatgctgacagagagatgaaacttcctgctgatgaaaaggcaacagcaaacaagcagaagccagtttcaagttcccaacagacaattgaaccaattagaggaggaactcctacctcatatggcagtactgatgatgacttggccaagacatcaagagctaatgaaagacaaacgccaccttcaaaggcgcaagcaccagcatccaacagacagagtgcttctacagctctccaaggaggcacacctgatgctcgtggggaaaatacagcagtcaaaccatcagtcacttctccaacaggtatgcctacttcatcaagaagacaagaaccaactccatcagtcacttctccaacaggcgtgcctacttcaccaagaagacaagaaccaactcctgacactcaacgtcgtcgcgcagcagatcaaatgccatcccaagctccacttccgtcttccttcagtacaaggaacaaggagaatggtatttctgaagctggtcaaaccaacacagtagcacctgatgggctgccaggtccgggagttcccaaagatgctggaccacaggttgcaggaccttcagtcgtgaaatcacagaagaacatgaatgaagcatacaacgatggaccatccacacagcagttgccaaatgatcagtataggtctcagccaagagaagccaaggaagagcaaggagctgatgcagcactaatcaatgaaattggcaaggcccaaaaggatgatttgttggcaaatccaaatcaaagtagcactggaagagttcaaccaacatcaactgaagaaacatccaagcagcaactgcaatccgggctgaacaagcctatatcatctaaagatggcaaagaaacagtaagctatggcagctcagcaacgtccagagaaatgctaccttctattcctgataagagcatgagagtgcagcaaccgcaaggtgacaagtccagctactccagtatatcacaagaagacaatgtgaagcaagggtctcaagctgcactgcagggatctggaaatgagcagcctaagaaaagggacctccttgcaaatgctgatgagaaaatcagaggaactacaggagaagccttacaaaagtctgatgaagggcggatctcctctaatactgagcaaatgaaaagcaacagaaataacagcaaaccagatggctcaactgaacccacttcatttgatggcaatgaaggtaatcttcctgagtcacagaggcgtggctcatcaagcaacccgtaa</cdnaseq>

Protein Sequence

<aaseq>MTPRQAAPSVTQRASASIQERISGARGASDDMFGKTSSADQSNT PAIPKQTTVQGATPDVRGTSYADREMKLPADEKATANKQKPVSSSQQTIEPIRGGTPT SYGSTDDDLAKTSRANERQTPPSKAQAPASNRQSASTALQGGTPDARGENTAVKPSVT SPTGMPTSSRRQEPTPSVTSPTGVPTSPRRQEPTPDTQRRRAADQMPSQAPLPSSFST RNKENGISEAGQTNTVAPDGLPGPGVPKDAGPQVAGPSVVKSQKNMNEAYNDGPSTQQ LPNDQYRSQPREAKEEQGADAALINEIGKAQKDDLLANPNQSSTGRVQPTSTEETSKQ QLQSGLNKPISSKDGKETVSYGSSATSREMLPSIPDKSMRVQQPQGDKSSYSSISQED NVKQGSQAALQGSGNEQPKKRDLLANADEKIRGTTGEALQKSDEGRISSNTEQMKSNR NNSKPDGSTEPTSFDGNEGNLPESQRRGSSSNP</aaseq>

Gene Sequence

<dnaseqindica>240..849#1303..2144#ccaccatcaatcaatggagacaaacctctgcacctcctccaaccaaactagcagctcctgatgctcctagaaatgttgggttggccaaaacagaaggtgttgacaagaggacacagccaagcacaacaaaggaaaccccaaggaatgatagaaatgttttagcaacagggcaaggagctgatcgtggagttggtaatgaacaatatgacaagaattccatcgatgaaagagcaccacaaatgacaccaaggcaagcagcaccttctgtcactcagcgtgcttcagcatcaatccaagaaagaattagtggtgcccgtggcgctagtgatgatatgtttggaaaaacatcaagtgctgatcaaagcaacactccagccataccaaagcaaacaacagttcaaggagcaacccctgatgttcgtggtactagttatgctgacagagagatgaaacttcctgctgatgaaaaggcaacagcaaacaagcagaagccagtttcaagttcccaacagacaattgaaccaattagaggaggaactcctacctcatatggcagtactgatgatgacttggccaagacatcaagagctaatgaaagacaaacgccaccttcaaaggcgcaagcaccagcatccaacagacagagtgcttctacagctctccaaggaggcacacctgatgctcgtggggaaaatacagcagtcaaaccatcagtcacttctccaacaggtatgcctacttcatcaagaagacaagaaccaactccatcagtcacttctccaacaggcgtgcctacttcaccaagaagacaagaaccaactcctgacactcaacgtcgtcgcgcagcaggtaaagtaacccccactaaaagaaaatttgctcaattcaatcaagtagagttccatgtatatgcatgctcagcagcaggtcaaggaatacggtggaacgactaaacatcaccacaaaacaggcagcaataccttctgcaaaaagatagtagtttccaaatttctagatgagtttgaaaatcccaaaatcttatagcaaaatgctgcatttatattggcactccagcattttcaacactgaaaaaatcatttctcatatttgcattttgttggaatgcttagctcaatgtcgatttggatatttggttcatcctctaaatttagtcacaatgtgctattgcctattaggattatgagtccctgtcctaaggaaagaaaatcctatatattcttttgaactgtatgtttaatgtgtgggttgatcatggcttattgatttgatgacataacacagatcaaatgccatcccaagctccacttccgtcttccttcagtacaaggaacaaggagaatggtatttctgaagctggtcaaaccaacacagtagcacctgatgggctgccaggtccgggagttcccaaagatgctggaccacaggttgcaggaccttcagtcgtgaaatcacagaagaacatgaatgaagcatacaacgatggaccatccacacagcagttgccaaatgatcagtataggtctcagccaagagaagccaaggaagagcaaggagctgatgcagcactaatcaatgaaattggcaaggcccaaaaggatgatttgttggcaaatccaaatcaaagtagcactggaagagttcaaccaacatcaactgaagaaacatccaagcagcaactgcaatccgggctgaacaagcctatatcatctaaagatggcaaagaaacagtaagctatggcagctcagcaacgtccagagaaatgctaccttctattcctgataagagcatgagagtgcagcaaccgcaaggtgacaagtccagctactccagtatatcacaagaagacaatgtgaagcaagggtctcaagctgcactgcagggatctggaaatgagcagcctaagaaaagggacctccttgcaaatgctgatgagaaaatcagaggaactacaggagaagccttacaaaagtctgatgaagggcggatctcctctaatactgagcaaatgaaaagcaacagaaataacagcaaaccagatggctcaactgaacccacttcatttgatggcaatgaaggtaatcttcctgagtcacagaggcgtggctcatcaagcaacccgtaaaatgcttcatcagctcattttctttcaccatctctgccgtactgctatctacttccctattttcacataataaggtcacctatacaccagcggaccagccataccagtccatgttgtctactctgcatgtttattattccttcccagtggtgcagtattgttcattacttgaacaatgacttgttcagatgtcaaagttcttaatttaatcttgttttgaataatgtgaatgcaatatagcattctccatatg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0550500, RefSeq:Os08g0550500