Os08g0555800

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Revision as of 13:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0555800| Description = Conserved hypothetical protein| Version = NM_001069006.2 GI:297608982 GeneID:4346282| Length = 6864 bp| Definition ...")
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Gene Name

Os08g0555800

Description

Conserved hypothetical protein

Version

NM_001069006.2 GI:297608982 GeneID:4346282

Length

6864 bp

Definition

Oryza sativa Japonica Group Os08g0555800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27899022..27905885

Sequence Coding Region

27899022..27899219,27899297..27899354,27899424..27899573,27899971..27900053,27900136..27900193
,27900645..27900758,27901115..27901304,27901723..27901793,27902178..27902338
,27904578..27904729,27905849..27905885

Expression

GEO Profiles:Os08g0555800

Genome Context

<gbrowseImage1> name=NC_008401:27899022..27905885 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27899022..27905885 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcctcccgcctcccgcccgccgacgccgacgccgacgccgacggcgaatgcggcggcctcctcgtcgcggatagagtcgccgtcgctcagggcggccctcgccatggctctcatccactacaaccgcctcccctctcgagcagcagcagccgctgccccctctccccaggctctcctcaactggaagcgcaaggccaaggaccggaagcgcgagatcctccgcctccgcgaggagctcaagctcctccaagacggggcgcgcggggaggagatggagccgccggtcgcgtcgtgccgatgccacttcttcgacgggtgcggggaccttccaccgccgacggacggcgatgctggggagcactgggtcgacgacgtgctgcggaggagattcgtcagattggaatataacactgaggatgaggtacaacagcttagcttgtcgattgatttcctggtggagttatcagatggcttgtttgccaaaagagaagctggctcctcatttactacattttctcaccaggcagtagacttcattctggcttcactgaagaacattctctcgtcagaaagggaaaaggagataatcgaggagataatcaatggtttggttgcacgtttgatgaaaaggatgtgcaccactcctgaaaatgctggatcagttgactgttcagatgcccaattctccctgcagcacttattccgtaagttaggaaatgaggagtttgttggtcagaggataatccttgcaatttctcaaaagatctcaaatgtatcagaaaaattacttctggcagatccatttgatgatggtttccctgaaatgcatagcaatatgtttattatgatacaattaatcgagttcctaatatctgacagcttcaacaattggctatgccgtgatcattttgacagaaaactttttgaagaatgggtcagatctattctcaaggcacgaaaggacttggaagtcctagatgggagaaacggactgtatgtggtatacattgagcgagtgattggaagattggcaagggaggtagctcctgctgctcatcaggggaagctggacctagaagacggcagcaccatgtggtccatgagatatctgaggccccatgaagccatagagcttgcaacaagcacagatagcccttgcattcttgtgatcggaggatgtttgcctctgtttgtgtcacctacaaagaaggagaaaaaggaggctctggactcgacagcgagatgctttgcctcactgttagcttga</cdnaseq>

Protein Sequence

<aaseq>MAPPASRPPTPTPTPTANAAASSSRIESPSLRAALAMALIHYNR LPSRAAAAAAPSPQALLNWKRKAKDRKREILRLREELKLLQDGARGEEMEPPVASCRC HFFDGCGDLPPPTDGDAGEHWVDDVLRRRFVRLEYNTEDEVQQLSLSIDFLVELSDGL FAKREAGSSFTTFSHQAVDFILASLKNILSSEREKEIIEEIINGLVARLMKRMCTTPE NAGSVDCSDAQFSLQHLFRKLGNEEFVGQRIILAISQKISNVSEKLLLADPFDDGFPE MHSNMFIMIQLIEFLISDSFNNWLCRDHFDRKLFEEWVRSILKARKDLEVLDGRNGLY VVYIERVIGRLAREVAPAAHQGKLDLEDGSTMWSMRYLRPHEAIELATSTDSPCILVI GGCLPLFVSPTKKEKKEALDSTARCFASLLA</aaseq>

Gene Sequence

<dnaseqindica>1..198#276..333#403..552#950..1032#1115..1172#1624..1737#2094..2283#2702..2772#3157..3317#5557..5708#6828..6864#atggctcctcccgcctcccgcccgccgacgccgacgccgacgccgacggcgaatgcggcggcctcctcgtcgcggatagagtcgccgtcgctcagggcggccctcgccatggctctcatccactacaaccgcctcccctctcgagcagcagcagccgctgccccctctccccaggctctcctcaactggaagcgcaaggtaggtcgcattccccattccacaaccccgccgtcgaaccctaactctcattctctcctctgatcccgtgcgtgcaggccaaggaccggaagcgcgagatcctccgcctccgcgaggagctcaagctcctccaaggtacgtatccgccgcgccgcgttcgtttactcgatttccagtccccaattcgtgtatgggtgtgatcagacggggcgcgcggggaggagatggagccgccggtcgcgtcgtgccgatgccacttcttcgacgggtgcggggaccttccaccgccgacggacggcgatgctggggagcactgggtcgacgacgtgctgcggaggagattcgtcagattgggtacggtttttggcttcgatacactggttttttttttgaatttttgttgcttctagtagaattttttttttttgaaacctaaggcggaactttgttccacttttatatttagaagaagagaattgacccagtttataaggaaaaccgggcccgaaaaccacacaattgcacggttaattataggagcttctagtagaattttacatgtataagctctattgcaacagtgcggtggaaggataagcgcaggagactggacagatcactgcccacgagtagtttgatgggtgggtatcgctgcaaacatatgttcttctcactcactactcggatttcagattactgtagaatagtttttaactgctcaaatcttagtttcaattgttcgattgtgcagaatataacactgaggatgaggtacaacagcttagcttgtcgattgatttcctggtggagttatcagatggcttgtttgccaaagtaaaattctgttgtcttattatatctaagaatgtaagatatcccattttttgtgtttctaaaattagatttgtttgtgcagagagaagctggctcctcatttactacattttctcaccaggcagtagacttcattctgggtaagtgagagttgcacagttatgccacgactgaacatttaataaattatatctgttaattgtgccccacatatgcttcaagcggtatgagttctcgtcactgataataacgttcaacatatttgatttttctgtggttatttacatggcaagttgatactggaacctgaatgcatcgtcttgtagttagcaaaggaattatgaatttacttccagccttacctttcagttttcacatattttgttgattgtttaatggtagccgtataagatggctctagaaactattttcagtttttctattgcacttgccacacattttattttgtggggttaagagcacacttgccacacaaatcgtcaatatgttgcatatgaagttatctatttttgttttctgtttattccatgttagattgatgcagccatgtgtgataatcaatggtttcagcttcactgaagaacattctctcgtcagaaagggaaaaggagataatcgaggagataatcaatggtttggttgcacgtttgatgaaaaggatgtgcaccactcctgaaaatgctggtacttcaagttcagatgatctttaattgatccatttcagaccattcctagagcattttggatatatgtttttctttcagaaattacatccatagtgatgaatcatgaaatggtgccattagttgcacattagcagtgttttagctagtagcaccattactattccttaacaatggacttgactttcttttcgcttggtttgttttttgggaacatttatctatgttatgacatcttatagttttgcttatttttatcacttgagtgttaactgaatttattttcagaatgtgctctgctattgtcaccaattctatatttatttgtgctcctttcattttgttcgtatattgcaggatcagttgactgttcagatgcccaattctccctgcagcacttattccgtaagttaggaaatgaggagtttgttggtcagaggataatccttgcaatttctcaaaagatctcaaatgtatcagaaaaattacttctggcagatccatttgatgatggtttccctgaaatgcatagcaatatgtttattatgtaagttgattttcaactccttcagatagattataacagaggaatttctgcacaatttgtcataagataatgtccgactctgagcaatatggtctgcatacagtttttttctcctcttttctgataatttactgtactgtcagttgagatgcagtcatgttttcagaacatatttgtcataattttttgcccaacacaatctatactctgagattgccagttgggcagttacaacaacttgaagatattagacatgacatatctcatcagaagaagaatttatgatctccagttccatcatacttggggcatgctttgtgttgttgcatacttagcaaatatttaatttgattttctttactccctgtttcctataaggattatttcttttgtgccttactttgtttttatgttgcaggatacaattaatcgagttcctaatatctgacagcttcaacaattggctatgccgtgatcattttgacagaagttagtcctctgttgccctgatggcgctgttttatatttgttaattgttattcaatgtgaattgtgctgcatccaacatgataacatgaaaacaataaactatatccacatatatgttttttcttcattcaattcttctggttgcagttaaatatctttggtttctacattgttctttggaattgcactttatcatctcatactaattatttgagtcgagtcacagcttataaattgtataattctatccctgaatctgaatagctaaatattgaaagatacatgctgataatggtgcaaacataactcatcattgcatctactatctctttttggcatttcatcacatgagcttgatcaaatctaaatacaacatttattcagaactttttgaagaatgggtcagatctattctcaaggcacgaaaggacttggaagtcctagatgggagaaacggactgtatgtggtatacattgagcgagtgattggaagattggcaagggaggtagctcctgctgctcatcaggggaagctggacctagaagtcctctccaaactcctttactgagaacatgctgcctctgactcgccaatgtattcacccacatgtcatttggatggcaattctcatgaattattagaggcttgtactctacaaacttggaaactaacatatcacattttgtatatcaatttcagattttcaggatgactagctaagggaagatgatgtagcaagaaggtgttttgttctcctttgaatggctgggaaaccaactaccgaagcatgctcaaaagtatgtttcattaaccccatgtgttaatgagtagttatcacaaaccagtctgctataatttgaaattgtatttcttcaccaagacccttacatgcctacattatggtctataacacagaccttagaatctattaggggatccaatattgtgataggcattgtttggtatgtttagctaattgttttactctttactccaatttacttatgtcatatttatatatgcatgttttatgtctgctctaaaaaaggaagggagtttttcttaaatacttaagaggcaataatgcatcagccccttttgtcatgtgtgtgtgccgtgcaaagggcagttttgtctattatgctttcatgtactgtcgttttcttcatttctagatggtgatgtttaaattacggtgtgaactctcaataacaagaaaataactaagcgtgttctggggtggtgactttactcaacaagtcagttgctttacaaatttgatctcgtaagtgcccccttgtggctatatgatgacgttctggaattaggattgcaaataaactgcctaaaactttgtgtagctgagataatatagtacacagcctctctgtatgtattctatacgtgatattctcaaatgtttacacaatgtaagtttatgaaacaatttttaattgagaaacgttaagaaatcaagtattctctgctatttcagagacatatgttaggtccttattctgaagggttatctagattagaaattgttaacagggtgttggctttaattatatctcagcaacatggtgcagacaacatgcaccatggaagattagggatgagtttaaagtcttaatagccaaagaatattagtgttctttcactctcgttttggcaaagaatgagcttgcactcttcaccctaagaaaagagatagcccttcctagctctagttaccaaatcagtgtttgagtagttacatcaccttttagtcagcagctagcttagctccgttctcaactggtataacaacaactctcatgagccatgaggggagatagtagttaaccaatcccaggatcttccgagtttttatcttggttaagctcaactgatctcttcatcccattgacaagacctgtatgcttgatcaatgcaaggtccttttcaggtaggccaataccatccagcatctggcatctgctccaatcaacaagtgacgtgcaccgccgtttcagagcctaaatccggccttcttcctcaacggtgaaatatctgaaatctgaatcccagatctgatgtattatatccttcttaccattttaacatgaacgattaaaacgacaggtgcacgttactggaaaggttaactcgttgtcatgtcaggctaatagaggatgggtgaaagcataaccagtttcaagaatcaatatcagctttcatttcaagtactccctggagttacagaggtggtttctatgagccctaaagtaagaccatcttcagaatttatggacttccgtggcaatcggtgagttctgataaaacgtcaattgaaatcgtaccatgtatagtagtaaagttacataaggctgcttgactcaatttatgttgcaactaaaaactactttgttccaaacattccattgcttaggaagaatactaaaacagcgttaatgcaattatcaattcatgcatgttagacataaagctttatttacttgagctccagttcataaacttacactcagaggcagctgatgtaatttcaattcaagttaaccatgccttagctggtacttgaaccccaagaaatataaactaatggtatatgcaccaaaatatgtactcaagacatgaaaatctttcctttcttgtttgggtgggaggggtcaccagtactggactactggttataactatcaattatacgtgataataacgcgtacatgtcatgataagctgatatgatggtgacaagccccatttgtccatttgcctcataggacggcagcaccatgtggtccatgagatatctgaggccccatgaagccatagagcttgcaacaagcacagatagcccttgcattcttgtgatcggaggatgtttgcctctgtttgtgtcacctacaaagaaggagaaaaaggaggctctggagtgaactccacttgcctacaaaagacttttgcttctgaattctggtattagttggggagtggtgtttagcacttgcacgtcaggatgtgaacatgcattgagagggggtagatgctgctgctgtgagcattgatgaagctttgctaattggcgacaaagaaccaattatcgactggacttttgtccaaagtggtttgctttagttagtagcgaatgcatgcattgccctgccattgtgtttcgtcagctacatgctaggaatattcaacgagacagagggggatggttagccagctttgaaatgaggactagaggaataggctctcaaatcaggtctcctgatctggtttggtgtgcttcgcgtccaaatgcaagaagctctttggcttatacaatattattatatatctattgtcgaattggtagcatgcttaattccatgctgtgtgattattggcacaaaagtatctgacagacagatggaatccaccaagtgaaaaaaaatcacaataattagtaattagctaactgcaccaaagaaactatagctagctactgaatgtctgcatgccctgacgcacgggcggatggacccatgaactgaaagctacaagattaactaaacaagatcgtgtagacctcgacaggtaagtgattggtaatcacatggagtgtcctaataagttgcagatgcccaaaggacaaggacaggagaatgtagagtactccaatagttttttggaatcaatggtgtgccttggaaaagtatataggacaaacagtgagatatagtctgatagatcactcgagttcatgacatgaatccttgagcatgcagaactacagaagtgtgatcaacttgtttttgcatgttcaaatataatgccatgcataacagtagtgtctgacatgtttgctttctgtcatcttgttttcctattatatacgttcgatatgagccctgttactgtcgtgtggctagaattaattctgttagatgcatgattcgcgcgtggctagaaatgacatttgtgtatacatcatcgtttctttatcataatttcttgccatcgtgccatggcaaattaactgcttgttaccaaaccatgcattacacagctcgacagcgagatgctttgcctcactgttagcttga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0555800, RefSeq:Os08g0555800