Os08g0557700

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Revision as of 13:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0557700| Description = Similar to Histidine-containing phosphotransfer protein| Version = NM_001069022.1 GI:115477782 GeneID:4346300| Lengt...")
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Gene Name

Os08g0557700

Description

Similar to Histidine-containing phosphotransfer protein

Version

NM_001069022.1 GI:115477782 GeneID:4346300

Length

4909 bp

Definition

Oryza sativa Japonica Group Os08g0557700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27992607..27997515

Sequence Coding Region

27992930..27992989,27993126..27993256,27993415..27993483,27995106..27995177,27996253..27996325
,27997106..27997144

Expression

GEO Profiles:Os08g0557700

Genome Context

<gbrowseImage1> name=NC_008401:27992607..27997515 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27992607..27997515 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgccgcgctgaccagccagctcaacgccctcgtcaacaacatgttcgccatgggtttgctggacgaccagttccagcagctgcagatgctgcaggactccaccgcgccggacttcgtctccgaggtcgtcacgctcttctgcgacgacggcgagcggatcatctgcgagctctccaggcagctggagaagccaaatgtggattttgacagggtggactcgtatgtgcatcagctcaaggggagcagcgcaagtgttggtgctcagaaagtgaagaacacttgcattcagttccgtgagttttgccaacagaggagcagagatgggtgcctcaagactttggatttggtgaggactgaattctatgatcttcgtaacaagtttcaggctatgcttcagctggagcagcaaatccaagcttgttaccctaaacattaa</cdnaseq>

Protein Sequence

<aaseq>MAAAALTSQLNALVNNMFAMGLLDDQFQQLQMLQDSTAPDFVSE VVTLFCDDGERIICELSRQLEKPNVDFDRVDSYVHQLKGSSASVGAQKVKNTCIQFRE FCQQRSRDGCLKTLDLVRTEFYDLRNKFQAMLQLEQQIQACYPKH</aaseq>

Gene Sequence

<dnaseqindica>324..383#520..650#809..877#2500..2571#3647..3719#4500..4538#gctcattcctttataggaaagggctggggaaataaaatctaaccaaatttatgcgattattgttccaactccagctcatgctcatcaattcaaattaagtagaaattaaaattaaattccaagagcagctcacaacagcacaaaagaaaattaaaacttgcctttgggaatccaatgcccactcctccccatataaatcacacccgtcgcatcgctccgattcccaatccccacgcttccattccatccatctctctcgctctctcgcttgctcgccccgccgattcccgatcggagtgaggagctcgccgctgctgcttgccatggcggccgccgcgctgaccagccagctcaacgccctcgtcaacaacatgttcgccatggtgagtgaggcgcttcacacgctctttttacgaattttttgcgccatttttggcggaattccgggtgtggatgacgagatttttttggggttccatgtgtgatgttattgttggattgtgtgtattggggagttagggtttgctggacgaccagttccagcagctgcagatgctgcaggactccaccgcgccggacttcgtctccgaggtcgtcacgctcttctgcgacgacggcgagcggatcatctgcgagctctccaggcagctgtgcgtgtaactgtttcgcttgcttttgatcggatcgttcgtgttcgtgttggggattggcttgattttggtttgggagatttgattgctgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcagggagaagccaaatgtggattttgacagggtggactcgtatgtgcatcagctcaaggggagcagcgcaaggtgagcttttcccctgtccttttctggatatggaaatttatgttgttatggataattattgctgttattgtcacttggcgcacgaaattgggtatgagatccctttcgaatgggagaatttaaagcgttgtgcgaagcatgtagtcaactttgggaggattgtcatatgtttgattattgcatcttttatggcgtagaatctgacaaaaatggtccattccacccaaagtgattggacagttcgaagagcagcggttcacattgttctatcatatgaattgcccttctgagcaatttgggatgggttgtcgtccgtttgatagctgtatcattctatcatgtagatatgacaaattcagtcccgctcccatgttgatcagacggttcaaatagtagcattcatattctcctgttccttgtggtgctccagatctattcaaggaggattgtcatatgcttcattgttccagcattccttgacatagatctgaaaacatgcttctgttccatcacacttattgaatggttcgaagaactttcctccattccaaaatgacttggtttacacgtgagagtcctatagtttgaaatgcttcatatttacgaatattgtatctaattttacttagaattctattttttgttatttttcaaacccggagtgttatcacattttagattagttggtcattaaaaggtagactgctagagaatatatcatagattagtgagagaagggtctaatggtattcctaagtgtatagaccataaactacttcaccatggatggtccttcagagcttctatgcaccatatgcacaaacagtagtaggatgacacagcatgtaaaattcctgtttaaatgccttttttttttttccttttggtgtagtcatggttttgtacctttacaccttccttcctcgagatccctaatttccctatacccgaagatatcttcctgatggctacaaaagaaaaatgtttccatttgagatttgtttactgaattttggagatctccttacttggtcatatctgcaggtgctatcaaattttcttcttgctccagatcttaatagtacctagaatttaatcctgctctttatcagtatatcctcagaatgatgttttaaggtacattttgtaagggtacactgaacctattcaaacaggttgtctggagtttatccagattagattttttttcttgaaacagaaatttaaataagaaattgacaaacaaatcctttcgcctattcaatttgggttcaggtatatttatgtactggagtgttattctacagaatcaaattatgtatgaaaataactcaccatggttcttcatgttagatctccttatatatttagaactggaactaccaattggcattcatacacatcactacaaatattaaatcttgttgatagtaggcaactcacaagccagacggaaatgatcaataaaaacatgcaaatctgatagtaatatcatcgtcccagaatttctagtaggtcaatgataatattgcattgttgaagatataatcaaatttgttgctcgtctttccattaaagcatttgaggagccttcctgactgtatatccttgcatgtttgcagtgttggtgctcagaaagtgaagaacacttgcattcagttccgtgagttttgccaacagaggagcagagatgggttagtacctattaatacagtattcccatttttttatcatattattgcacatatcgttatatgcatatcttaacgatgatctagtgcactcttttcttacattttcctattgttagtgttttctgtggtataatgttgacgtaatttcttgcattattttttctattgtaacatatcttcatggaaagcaacaactggctgattctactctgcctgttgacttaggattgtaattgctccactccaatttccaagataatagaatcactttaaaaggtgtgactaatgtaaactctatggcaggcatgccttgatttgaaatgaaatagtttgattcttatacagaactggtagatttttcagtatttttttcttttttgaagaaagggcaaaagctttgccacttatgtattaataaagcagaagggccatgacaaaaaacatttacaaaagggaaagggaaaaacaggggatgtgatgctcgcgcaccagcccaaaaaacactacactctgctagtcgattattcccagggttttatctccttaagcttgaccgcacctgcctttacccaggctgaggcttcttctttgatttttgctagtagggtcattggggtggttgcaacatgacggataactcttgcgttttgcaggttgtccaatatgcccccaaatattttagcatgcatatttgtagtggaaccaagttgttccatcctctctgtatgttgtgcagctattcagtaaagtagggtcattttggtttgaaatcctaccaaaatatttgtagtgccaattcttgggcaagttttggcactacaatttttttggtagggtagatttatctcaactccatagatttagcaaaagttggttccaatccaaatggctaccaagtactactattcaaggctaccaaatacttggtagggcaggaattggcctcaaaccaaaacggccctaaatctacattatattgatctttatatcttcatttatgtaatagcctaaaataaaatatgttatttttgtgacaattgtccccttctttgtgttgggccttttccattatcaggtgcctcaagactttggatttggtgaggactgaattctatgatcttcgtaacaagtttcaggctatgcttcaggtattaccttgcgttcccaaattacatcctatactccctgttgtgttgcactgagttggagtggacatcttaaaagtaagtgattttgtgtaaggtttggaagtgatttgtaaggtttgctttatgattggaacattaaattgtagagatggttggatatgatggaattaatactgttactttccgtgcaacacacaaaaacaatcaacaatgattagtctgtttgctgaatgaatagcattagtcttttcatgacacatatatgaggtagtacagtggtatagttgctgtgaagcattaaatagcatgcgagataatggcagttggcagaagatgaacatggtatatttatttctttacaaagttggttttttttctttgtcatttccagtgctacatttgtacttaagcctttacgtggtaccacttggtgtggtaataattatgacttacagatatcgcactcaaaaaccttgtttgtcttataactattttattttatcccatccttgcgtgtggatatatctatgggataattccaagaggcctagagttgtttggtccccaacttgtatttttcttctcataatatgggtagacctgatcttttacctccccagtttggccctttctcatttctgaatggaaaatggtcatttaattctggcttgcatttttcgatttcttgggctgtcaaatcttactagtcttatgacctgacgatgcaaatttaccttaaccatttatagaactgatctgttattttgctttccaatgcagctggagcagcaaatccaagcttgttaccctaaacattaaactggcgcgacagtggagctgcatgtttacacaactactgtgcctttggagttgtagaacatgctcgtttagcttttatcttggagtcatttgtttctgggatgtctgtagctgtttagcaacaagctgatctagctttggcaccttcattactgagtagtcgctctcagtttctgtgatggggacaaccgtttccagcaatttgtagtatctgttgttatctggtgtctcagctatagtttttttcggtcgtttagaaatgcaacagctgtgcaatttcgcgaaaattgcattttgctggttgattagggcggcttgtggtatgttgttgagaacaaagcgatacttaatatcgatataattgctgtttg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0557700, RefSeq:Os08g0557700