Os08g0558400

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Revision as of 13:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0558400| Description = Similar to Kinesin heavy chain (Fragment)| Version = NM_001188770.1 GI:297726670 GeneID:9271005| Length = 6110 bp| ...")
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Gene Name

Os08g0558400

Description

Similar to Kinesin heavy chain (Fragment)

Version

NM_001188770.1 GI:297726670 GeneID:9271005

Length

6110 bp

Definition

Oryza sativa Japonica Group Os08g0558400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28030714..28036823

Sequence Coding Region

28034843..28035008,28035087..28035184,28035288..28035426,28035514..28035863,28035957..28036115
,28036517..28036646,28036718..28036812

Expression

GEO Profiles:Os08g0558400

Genome Context

<gbrowseImage1> name=NC_008401:28030714..28036823 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:28030714..28036823 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>attcccctcctcctcctcgccgccgccgccgccgccatgtcgtcgcggcaggacaaggagaagtcggtgaacgtccaggtcctcctccgctgcaggccgttcagcgacgacgaggtccgcagcaacgcgccccaggtcatcacctgcaacgactaccagcgggaggtcgccgtcacgcagaccatcgccggcaagcagatcgaccgtgtcttcaccttcgacaaggtgtttggcccgacagcgaagcagagagacttgtatgaccaagcgattatccctattgtaaatgaagtcctcgagggtttcaattgcaccatcttcgcttatggccagaccggcacgggaaaaacatacaccatggagggtgaatgcaggagagccaagagtggtccaaagggtcagttgcctgctgatgctggagtcattcctagggcagttaagcaaatatttgacacactggagagccagaatacggagtacagtgttaaggtcacattcctcgagctgtacaatgaggaaataactgatcttcttgcgccagaggagatatctaaggctgcccttgaagaacggcagaagaagcccttacctcttatggaggacgggaaaggcggggtgcttgtgagaggcctggaggaagagatagttacgaacgctagcgaaatattctctcttttggaaagaggatctgcaaagcgccgtactgcagagactctgttgaacaagcaatccagtcgttcacactccctattctcaatcaccattcacataaaagaggctactcctgaaggagaagaattgataaaatgtgggaagcttaatttggttgacctggctggatcagagaatatctcccgttctggagctagggagggacgagctagagaggctggtgaaataaacaaaagcttgcttactttaggtcgcgttattacagccttggtcgagcaccttggacatgttccttacagggacagtaagcttacaaggttgctccgtgattcactaggagggaggaccaaaacttgcattattgctactgtttcaccctccgtgcattgtctagaggaaacattgagcactttagattatgctcaccgagcaaagagcatcaaaaacaggcccgaggtgatctag</cdnaseq>

Protein Sequence

<aaseq>IPLLLLAAAAAAMSSRQDKEKSVNVQVLLRCRPFSDDEVRSNAP QVITCNDYQREVAVTQTIAGKQIDRVFTFDKVFGPTAKQRDLYDQAIIPIVNEVLEGF NCTIFAYGQTGTGKTYTMEGECRRAKSGPKGQLPADAGVIPRAVKQIFDTLESQNTEY SVKVTFLELYNEEITDLLAPEEISKAALEERQKKPLPLMEDGKGGVLVRGLEEEIVTN ASEIFSLLERGSAKRRTAETLLNKQSSRSHSLFSITIHIKEATPEGEELIKCGKLNLV DLAGSENISRSGAREGRAREAGEINKSLLTLGRVITALVEHLGHVPYRDSKLTRLLRD SLGGRTKTCIIATVSPSVHCLEETLSTLDYAHRAKSIKNRPEVI</aaseq>

Gene Sequence

<dnaseqindica>1816..1981#1640..1737#1398..1536#961..1310#709..867#178..307#12..106#acagattttgaattcccctcctcctcctcgccgccgccgccgccgccatgtcgtcgcggcaggacaaggagaagtcggtgaacgtccaggtcctcctccgctgcaggtacgcccgccgcgcgccctcccagatctccccagatccgccgcccctaacttcccctctctcccgcgcaggccgttcagcgacgacgaggtccgcagcaacgcgccccaggtcatcacctgcaacgactaccagcgggaggtcgccgtcacgcagaccatcgccggcaagcagatcgaccgtgtcttcaccttcgacaaggtcgcttcccatctcctcccagatctgccaaaattttaaatactggatgcctcggtttacctgctcttgtgctctagttttagtaccctttcaaacttttaaattatttggatgattccaaattctgcgaaatgcgtaccgaggttttcgtgattggtccggcgatttggacggtaactattcagtggctagggtttcttaggtgcattccaacgggctgaatctgcatttggctggagttggttcgcaattaataaagcatctggtttatacaagataatataagaaaaaaaaacaacacaggaatgtgtttccccttgttggagttgctgtggaatttatttcatttccggtttggccgcacagtacagagttctaatatgcagccgtttttctttcaggtgtttggcccgacagcgaagcagagagacttgtatgaccaagcgattatccctattgtaaatgaagtcctcgagggtttcaattgcaccatcttcgcttatggccagaccggcacgggaaaaacatacaccatggagggtgaatgcaggagagccaaggcaagcctacgctgctgttgctctttcatcatgtgtttgcctctaccaaagggttgcttattgtttgttttcctttcgtcgaaatacttgcagagtggtccaaagggtcagttgcctgctgatgctggagtcattcctagggcagttaagcaaatatttgacacactggagagccagaatacggagtacagtgttaaggtcacattcctcgagctgtacaatgaggaaataactgatcttcttgcgccagaggagatatctaaggctgcccttgaagaacggcagaagaagcccttacctcttatggaggacgggaaaggcggggtgcttgtgagaggcctggaggaagagatagttacgaacgctagcgaaatattctctcttttggaaagaggatctgcaaagcgccgtactgcagagactctgttgaacaagcaatccaggttaatccttacctttgtctttttaaactttggtttgctcatctcaagaaactctgtgtgcttattaccatatatgtaacatttcagtcgttcacactccctattctcaatcaccattcacataaaagaggctactcctgaaggagaagaattgataaaatgtgggaagcttaatttggttgacctggctggatcagagaatatctcccgttctggagctagggaggtaggtgtataaccagctagaatgctactatttcatttaacattcatttatgttttggatattttattatactattaagttagacacttgagcctgattgtagggacgagctagagaggctggtgaaataaacaaaagcttgcttactttaggtcgcgttattacagccttggtcgagcaccttggacatgttccttacaggtaagtggttaaaataccttgcaacagtaatctatttggccttttgtgctaactgattcgatctttcttacctttcagggacagtaagcttacaaggttgctccgtgattcactaggagggaggaccaaaacttgcattattgctactgtttcaccctccgtgcattgtctagaggaaacattgagcactttagattatgctcaccgagcaaagagcatcaaaaacaggcccgaggtgatctagcttcattttctcacatctacagtcaatgtgctgatagcagtgtggtgtgtaaacagaacagcttaaaatagtagtaatcgctttattcatattggctaaacaattgtacaaaaacaagtaaataattcaaataggaggtgcctagtacataccaaaattataatgggtttgaagagtacaagctgaaaatttttattaactccttaaagcttgtaattgcatagtgtggcctgctattaatatatcgtttattttgtattccaggtaaaccagaaaatgatgaaatcaacattaatcaaagatctttatggagaaatagatcgacttaaagcaggtctgtagtgatttgacagtcagttctaagtaattcacaatggttgcagaataacctcacaattttctctattcccagaggtctatgctgctcgtgaaaaggttggagtctacatcccaaaagacagatatcagcaggaggagaatgagagaaaggtaatcttttggatttaatggatctgaatggggaaatattcacaaacctgaaatatgtactgtcaacatatctgttatgtaactctagatgttattatggtattgagaagatttggagcagtttggctgatgatgctaacttttcttatttttcctttttaaggccatggctgatcaaattgaacagatgactacttcgttggaagcaaatcagaaggttcgtaaagtgcttgttgtgtatatttgatatttgttcttgtttaaaattgatcttttgcttgggtttcagcaaattaatgatcttcaagaaaagtacgactcagagcttcaacattctgctgatctaagcaaaaagcttgaagccacagaggtaatcatgattgcaagttagttcctttctccttcatgctattttgtgatcgaaggcttatagtgttgtaccatgatagaaatgtctggaccatacaagcaacttactatccacaaccaaagaagatttgaaacaagcccagtataatctgaaggagaaagattacataatctctgagcagagaaaagcaggttcgattctttgcacattttttattcctgcaggtcaattgttaataattctaacagtattttcatccatctgtgttgatcagaaaatgctttaattcaacaagcctgtcttctgagatcagacctggaaaaatctaaccgtgagaatgctgcactctattcaaagattggtaagctcttttggcttaattcgatgactattccaaaatgttgcttactatcatctttgtcattggttctaactgaatgattaccatgacaaaatagctcgaggagataaactaaatgctgcaaataggtcagtggtgaactcattccaagctgaccttgcttcaaagttggatattctctccactacccttgccacatctatagatcagcaaaataaacaccttaaatctgtggagaacttatgcaagtcttgtgttgattcccatgacacggtatgcattgctacttcataaatctccatgcctaattttgcaaattagttatgtgggctcagtggttccatattatatttatatgtttttttttgttaaatgtttaaggctacttcggagataaaaaagaagattttggcttcaaaggcactttatatgtcacatatggaagccttccaaaatgttgtgctcctgcataaagcaaattcaaattctacactagaggatatatcatccctatctgctgcaagctgttgcagccttgatcaggcaagcaatcttcttagttatccaacaaatacagaacctgatgctctttactctgtgactaccctttgattgagttattctcatggcattattgttaatgacagcttctagcttgtgtcgagggagaggcacagaagatatttggtgatatccagaatttgctagctgatcatcgaagcgaagtggcacatttcactcaagagttgcgggaggtcagttacttgatctgactgttaaacattctaaattgtcaacatacttgcctatgatcagctcttaattgaagtttgctcctgttattatgcagagtttccgcattagcttggataggacgaaggacatgtctagtttcatccttgggttgttcgataagtatgtggaggaaacttcgaagttgcagagccactccaatcacacacatgaagcacaagtcaaaagccttgaagatttccagaaggcttatgaggtgatcgatcccccttttgtctgcttgattggcaaaatttggttgctgtatctaacatcaattttatgcaggagcaatcaaaatcagaagaacaaaagcttctggcggacatcaccagtttggtttctaaacacgttactcgacaacgagaactggtgcgttgcatactttcacctcataaatataagtctggccaaccttttgaggcatgcttttgatgtgtgatcataattttgtatcttctcaagatgcttctggggcgtgtgaattcagttgtagtttggttttgatggaagcctggtgtattttcctgcaggtgggtggtagactaaactctcttggtgacgccgctcgtggaaacaaagcatttttggatgagcacacgtccgccatggaggtggtcacgaaggacgccaagagaaagtgggaaatgtttgcagagcaggcagagaatgactgcaaagttgggtccaacttctctgcagctaagcattgtcgcatggaaaccattctgcaggaatggtatgccttcagttgctgcttcttcgttccttcttcccattagtttgattggctttctctaactaatgatttgtactggactcagtgcatgcaccgtcgacactgctgctcaacaatggaaagcatcacatgcaactgttaacgatctatgcagaaaacaaatagctgaagttgaagcactcgtcaggcaagctcatagtttctcttaagctagctgttgctggttacaattggttaggaaatattgtttagtgcttcttcatcagatttccacttatcgagctagcatttcaaacaatccattcttttaataatcgtgtttgccaagtagcacataatttcacaacaaaagggaacacttctgaattcgttgtgaatgatggcagtggaagttttgaaaagtttaaaatctaacgagcgtctttatgttgtatatttcaggagtgcaatcgaaaccaacgagcagcacgaagcagagattgcatcttcccgtgccacggccgaggagcatgcgtccaacagcagcaaggacctactccaagatgttgacagtaagttctgagatctcatcacagttgcctacttctaaaacacggagttgcgtaaagctaatcccaacctgtgtttcccatatgctcgcatcagatatgctgcaggaggcgcgcaattcgtcgtcgagagtggtgtcgacggtggaagctcatttgggagagagccagcatctacaggagagccactccagccataccgccggcatcaacacccacgccgacaacgctttccagagcagctacaaggtgagcgagactagtacactcaaaatcttgtgaaccgatgacaattttcatttcaccgaccagagcctgatgaacaactccgctgttgcttgtgcaggactacgagccgaccggcgaaactccggtgaggtcggagccggaggtgccgagcaaagacgcgatcgagtcgctgcgagcgatgccgatggagtccctgatggacgagttccgcgagaaccacccctacgagccgagcaaggaccgcaggccatcgctcatccctcgctcgccgctcgccaccatcaacaactgatgaaaatccattggaaacgcaacgcaatgcaatctgtctctgtgtgtgtactagtgtaatcttattagccgtaagtaggtcatcaaatgctggcttttggtgtcctttggttgttgtggctcagtgccagtgccagtccagcttcttgttgtgggttgcgagctatctcagcttcccccggcgcccttacctaactttctttcacattttattattttgatgtaccaatctgttgcttttctgtgtgattattggagctgcataagagatttgttgagcattgcattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0558400, RefSeq:Os08g0558400