Os08g0557800

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Revision as of 13:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0557800| Description = Similar to Fatty acyl coA reductase| Version = NM_001069023.1 GI:115477784 GeneID:4346301| Length = 6297 bp| Defini...")
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Gene Name

Os08g0557800

Description

Similar to Fatty acyl coA reductase

Version

NM_001069023.1 GI:115477784 GeneID:4346301

Length

6297 bp

Definition

Oryza sativa Japonica Group Os08g0557800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28004318..28010614

Sequence Coding Region

28004541..28004637,28004789..28004892,28008146..28008345,28008461..28008561,28008674..28009377
,28009918..28010081,28010188..28010347

Expression

GEO Profiles:Os08g0557800

Genome Context

<gbrowseImage1> name=NC_008401:28004318..28010614 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:28004318..28010614 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggcttctgataggttggatgcagaaaggatcatagagtacttcaagggcaagagcatcctcatcactggagcaactggctttcttggcaagattcttgtggagaagatactgagggtgcagcctgatgtcaagaagatctacctgctcgttcgcgccatcgaccaagcatctgcaaaccaacgcgtccaatctgaggtgacggagacggagctgttcagcgtggtgaaggagaagcacggcaagggattctcgcgattcatcgaggagaaggtggtcgccctcgccggcgacatcatctacgacgacctgggcctcgatcccccgttgcttcaacacctcgccgacaacctcgacgtcatcgtcaatggcgctgccaccaccaacttctacggcaggtatgatgtgtcgctggatgtgaatgtgctgggagtgaagcatctgtgccaattggccaagaaatgcaggggcctcaaggtcttcctccatgtctccactgcttacgcgggcggcgagcaggaggggctaatccaggagagggcgttcgaggaggggtgggcgctgcgagaggggatgcacctggacgtggacgcggagcttcggctggtggccgacgtgcgtcgggaggttgaagacgacgacgacaaggcgcggaggaaggcgatgaaggagctggggctcgccagggcgcgccacttcgggtggtccaacacctacgtcttcaccaaggccatgggcgagatggtgctgtccaggatgctgctgcaaagctcgtcgccggcgccggcgatcaccggcgccggcggcgtggtggtggtgcggccgagcatcatcacgagcatccagcgggacccggtgccggggtggatgcaggggacgcggacgatcgacacgctcatcatcgggtacgcgaagcagaacctgtcgtgcttcctgggcgacctggacctggtgatggacgtcatcccgggggacatggtggtgaacgcgatgatggcggcggcggtggcgcactccggcgaggccgggcaggagcggccggcggtgtaccacgtgagctcgtcgctgcggaacccggcggcgtactcggtgctgtacgaggccgggcggcggcacttcacggagaagccgagggttgggaagcgcggcgaggtcatccccaccaaggagatgcacttcttcaagaccatcgccagcttccaggtgtacatgctggtgaagtacaggctgccattggagatcctccacctggtgaacctcctcctttgtggcctcttctcccgcctctactctaacctcgcccgccagtaccgctacgtcatgcacctcgtcgacgtctacggccccttcgccttcttcaaaggatgcttcgacgacataaacttggagaggctgaggcagaggatggggaagagcaggaaccctcaagacgatgaaatgttcaacttcgacccaaagaccatcgattgggaggactacttctacaggatccatatacccggtgtgctcaagtacatcctcaagtaa</cdnaseq>

Protein Sequence

<aaseq>MMASDRLDAERIIEYFKGKSILITGATGFLGKILVEKILRVQPD VKKIYLLVRAIDQASANQRVQSEVTETELFSVVKEKHGKGFSRFIEEKVVALAGDIIY DDLGLDPPLLQHLADNLDVIVNGAATTNFYGRYDVSLDVNVLGVKHLCQLAKKCRGLK VFLHVSTAYAGGEQEGLIQERAFEEGWALREGMHLDVDAELRLVADVRREVEDDDDKA RRKAMKELGLARARHFGWSNTYVFTKAMGEMVLSRMLLQSSSPAPAITGAGGVVVVRP SIITSIQRDPVPGWMQGTRTIDTLIIGYAKQNLSCFLGDLDLVMDVIPGDMVVNAMMA AAVAHSGEAGQERPAVYHVSSSLRNPAAYSVLYEAGRRHFTEKPRVGKRGEVIPTKEM HFFKTIASFQVYMLVKYRLPLEILHLVNLLLCGLFSRLYSNLARQYRYVMHLVDVYGP FAFFKGCFDDINLERLRQRMGKSRNPQDDEMFNFDPKTIDWEDYFYRIHIPGVLKYIL K</aaseq>

Gene Sequence

<dnaseqindica>224..320#472..575#3829..4028#4144..4244#4357..5060#5601..5764#5871..6030#gtgcctcactcacagtcacaggtgcttgcttagcttagcttagctttgctgctgctccttctcattcataagccagcagctagctagcaagcagcacacacatatatcacaggccatctctctatccctaattaagctatatactccatatagctagctaaacacaggaggagtggaggaaggagaggctagctgatctagctatctgcagtgattagttaaaatgatggcttctgataggttggatgcagaaaggatcatagagtacttcaagggcaagagcatcctcatcactggagcaactggctttcttggcaagagtacgttaattgtgtgtgcatatatatagtagctagctagctagctagatcttgttcttgttcttgttcttgttcttgttcttgcaaggactggatatgaatgctcattgctgatggagctcattgctgctgctgctgcatatgagtgcagttcttgtggagaagatactgagggtgcagcctgatgtcaagaagatctacctgctcgttcgcgccatcgaccaagcatctgcaaaccaacgcgtccaatctgaggttgattcatctcatccatccatgcatctcttcctatttttttatacgtacttaatcaatttcgtattatcttcgttttttaatatatgatacggctgactttttcctcaaacttcgactaacaatactattcatttatttagtcaattaaagtgaaaagagtaccactgtatctgtcatcaaaagtattttaagtatacataatatctatttgtataaatattaattgtagaatggaccaatagtcaaataaacttaaaaatggtcaactgtgtcatctgttgaaaataaatggaggtagaatttaaaaggagacgtatatcacctagtattaaaatacgtacatggctgcagttgattggctagttggtgctgtcaatttttttcttgctccatcagtttctgtaagttaaaataatatgtgttggttggcctgttactgtatttttcgccggtctgccaagaaaccaacttgtctgcatggtcttcttatcttgtactcctcgacacatccaatcactatcacttacaagcagtaggtaataagctcacctactgcgttgcaaatctactaattttactgttaaaatgttagaaaaatagaaagtcatcacgcactcgctctgatcaagtagtccgctgaacttacaagttactacaacggtatatataattcatactatagttgtgttgatatgactaatcttttgaacataaataaacatgtattagtactagtacatatatagctgaaattcagctcgttattagcaatatatagatgcatggaaaccgtgtagctttctcatgcctactgattgattcgatatgtgactatgtgagaggtgacagccatgtccttttacgctgaataggttgatgattcgtgataatatcattcgatggtaaaaataaattaattaaatattataaaattgcaaatcaaatttaaattcatttataacaaagtttacactaccatttagaagctcgggaagcgtatatttactaagtcatttcattccttgaaataaatataatttagaaaatacaatttaaaagcttggaaaacataaataaatataattgaattttaaaaatcattatagttatcctgttattttattcctcgaaaaataacagtgtcgggtatagttgtgacagagtgcaaggatgggaatgttgataatttaccgcaatgaaaaacagttcgacgtgtgtatcagtgtagagctaccaagcagagcatcatatcccagtgacatacggtgaagtcttaaaaaaattaacttctgactagtacgaatcttaggttggtctaagtttgtctgatctgagccatccgtagaagggatcgatggttcagatggagcagaatgtaggcattattagttggaagctagcatatgatgaggcgtgggcgtccaaacgaataaaaatcttttaaaattaatttattgagtatggtcagaatactgctaaaatgaacattttcaaatttttgctatgctaaaaaattttgagtaagttgacagcatatattgcctttttaataggatagactaaatgtggtgttgccggaattctctaggtaataaactaaataccatatatttatcaattttatcaaacaatgatacagtttaaaataacatcaatctaaacaggttcgttatttaagtactacttactttttatgctaaatataactatactagttatgttcataaagacaatattgtaattctttaaaaaaatgatagtcaaaaatgaattcacaccaattaacagtgtcaagcagtaaggtatgcagtagtaataatgaggtgatggcccatgcggcaggtttgctgttgcagctgttgcctcatctcttcgatcccacgatttttttttcctctcgatcgaaacattgtttagtccttaatttttttttcaaaaacatcacgtcaaatcattggacacatacatatgtagagtattaaatatagataaaaaaattatttacacagtttacatgaaatcgtgagacgaatcttttgagcctaattagactatgattaactataattgctgcagtaacctatatgtactaatgacggattaattatgtttaataaatttgtctcacggtttccaggtgagttataaaattagtttttttatttatgtcagaaaacctcttccgatatccagtcaaacgttcaatatcacacctaaaaattttcttttcgtgaactaaaaattaatccacgcccaagactgtgatatgtaatctacctatagctgcacatagtacatgcatatgcatatgctgttctgatcgatatatatccatgcatggttggttattgcttgttgcctgcagtcgaattcattccttgcttaaataatttcactgcagcatgtgcgtactatcctgctgcaacctgcaccgtgcataataatgcacattactagtatactgtatttttcatgtgtatggtccaatatatccagctatccatccattacacagcaacactttactcaaatactcaatgcagagctagctgtactctgcatatgcagacatataaggccccacttgcggtgtgcattcaccttgtaatgcacatgcccgaagctgctcattatcttaaaaaaaatacggctctatcgttttacttattcgggaaaaagccaaacagcatatttataaaaaaaataatttatgaataatattttttttatatgttcttattggtctaaaagtaaaggctgaaaaataaactttaataaaaaatacaaaataaacttaaaaattaaaaatttaaattttaactaataaatataactataagcgaaaagacgagtccgatatctgtcgccggaaattagtactccactactgccagtaacatttactgacaaggcccggtacattatagtaaaaagaaatgaaaaatatcgtgtgtttgttgccatgagtacaggcatgaggcctgcatgcatgttgacactgacaacatgtttaacaggaggaggcatgcacagatgcactgtgtattagctctacgatactatacttacgtcctagaaagaatagttaattagtactaccataactgcacacttgtactactggttacagctagtagctgcgaaactacatgccgcagattaacttatagacgcactaggaaattaattaaaatgatgcgattaataaattaattaatgtgaaaaaggaaaacatatgcgtgctgtgcaggtgacggagacggagctgttcagcgtggtgaaggagaagcacggcaagggattctcgcgattcatcgaggagaaggtggtcgccctcgccggcgacatcatctacgacgacctgggcctcgatcccccgttgcttcaacacctcgccgacaacctcgacgtcatcgtcaatggcgctgccaccaccaacttctacggcaggtcggtcggtactatcgattcaaatatagtacaaatccattcaattcagttatatattaattgatgaaatggaatggaatggaattgccttgcaaatgatgaaatgatcatgcaggtatgatgtgtcgctggatgtgaatgtgctgggagtgaagcatctgtgccaattggccaagaaatgcaggggcctcaaggtcttcctccatgtctccactggtcagtcaagtcactcgatcactgcaccactgatcgatcagctgattaattaagctcgatcgatatatatatagatgcagttagtaattaaattgaagttaattgcatgcagcttacgcgggcggcgagcaggaggggctaatccaggagagggcgttcgaggaggggtgggcgctgcgagaggggatgcacctggacgtggacgcggagcttcggctggtggccgacgtgcgtcgggaggttgaagacgacgacgacaaggcgcggaggaaggcgatgaaggagctggggctcgccagggcgcgccacttcgggtggtccaacacctacgtcttcaccaaggccatgggcgagatggtgctgtccaggatgctgctgcaaagctcgtcgccggcgccggcgatcaccggcgccggcggcgtggtggtggtgcggccgagcatcatcacgagcatccagcgggacccggtgccggggtggatgcaggggacgcggacgatcgacacgctcatcatcgggtacgcgaagcagaacctgtcgtgcttcctgggcgacctggacctggtgatggacgtcatcccgggggacatggtggtgaacgcgatgatggcggcggcggtggcgcactccggcgaggccgggcaggagcggccggcggtgtaccacgtgagctcgtcgctgcggaacccggcggcgtactcggtgctgtacgaggccgggcggcggcacttcacggagaagccgagggttgggaagcgcggcgaggtcatccccaccaaggagatgcacttcttcaagaccatcgccagcttccaggttaattaatttactcttcttttttttttattttttaataatgaaagtttgttactgaattcagtctattacgacaagatgatatataattaaaatgcacattaccaaacacacagatcgatccaaaagaattacaaggttattttttaatggtatttctcttctatagattataagtcgctttggcctttttcttagttaatttttgttagtttgattaagtttatcggaaaatagcaatatctacgataccaaattagttcgattaaatgtaaacattgattatattatcataatatatttgttttgtgtgaggaatactactacatgtttctctgtaaatttagttaaagttaaaaaaaatttgaataaaaaaaatcaaaggatatgaaactgacggagtagaagcttttcattgaagtgtgttgtcaagatgatacaattacgataaacattttaatgtctgtataattacgatgcacacgatcaaacagatccaaaagatagaaaagaattacaagttggtattgatttttgcaggtgtacatgctggtgaagtacaggctgccattggagatcctccacctggtgaacctcctcctttgtggcctcttctcccgcctctactctaacctcgcccgccagtaccgctacgtcatgcacctcgtcgacgtctacggccccttcgccttcttcaaaggatggtacgtactacctacgtatttctctacttttatacacgtatatacaaatacctgtacattactactaacaagtaatcattactgcatgcttggattatatatgaagcttcgacgacataaacttggagaggctgaggcagaggatggggaagagcaggaaccctcaagacgatgaaatgttcaacttcgacccaaagaccatcgattgggaggactacttctacaggatccatatacccggtgtgctcaagtacatcctcaagtaaaacacacatggatgatgatggattatatcatcatgtataacagctggatgaagaagacttaagtattgtactctggctctgctcctccctgttacaaatgccagcaatctacctaagtatgctgatactagcttgtatgggaatatgcatgcttgctcaaagaattaatctttaatatatgtcaactactagactaagtaatgcttgtatcggagaagaatcaccatatcttaatcaataataatacactgtgtgcttgtgcttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0557800, RefSeq:Os08g0557800